RNA–Protein interactions for RNA: ENST00000512271.2

FAM149A-212, Transcript of family with sequence similarity 149 member A, humanhuman

TSL 3

Gene FAM149A, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM149A-212ENST00000512271 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
FAM149A-212ENST00000512271 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.89
FAM149A-212ENST00000512271 ABCC9O60706 1549 aa20.44■□□□□ 0.86
FAM149A-212ENST00000512271 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
FAM149A-212ENST00000512271 NACADO15069 1562 aa19.38■□□□□ 0.69
FAM149A-212ENST00000512271 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
FAM149A-212ENST00000512271 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
FAM149A-212ENST00000512271 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
FAM149A-212ENST00000512271 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
FAM149A-212ENST00000512271 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
FAM149A-212ENST00000512271 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
FAM149A-212ENST00000512271 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
FAM149A-212ENST00000512271 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
FAM149A-212ENST00000512271 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
FAM149A-212ENST00000512271 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
FAM149A-212ENST00000512271 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
FAM149A-212ENST00000512271 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
FAM149A-212ENST00000512271 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
FAM149A-212ENST00000512271 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
FAM149A-212ENST00000512271 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
FAM149A-212ENST00000512271 NCAPD3P42695 1498 aa17.78■□□□□ 0.44
FAM149A-212ENST00000512271 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
FAM149A-212ENST00000512271 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
FAM149A-212ENST00000512271 ATAD2BQ9ULI0 1458 aa17.76■□□□□ 0.43
FAM149A-212ENST00000512271 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
FAM149A-212ENST00000512271 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
FAM149A-212ENST00000512271 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
FAM149A-212ENST00000512271 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
FAM149A-212ENST00000512271 CUX2O14529 1486 aa17.59■□□□□ 0.41
FAM149A-212ENST00000512271 NESP48681 1621 aa17.57■□□□□ 0.4
FAM149A-212ENST00000512271 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
FAM149A-212ENST00000512271 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
FAM149A-212ENST00000512271 WIZO95785 1651 aa17.49■□□□□ 0.39
FAM149A-212ENST00000512271 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
FAM149A-212ENST00000512271 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
FAM149A-212ENST00000512271 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
FAM149A-212ENST00000512271 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
FAM149A-212ENST00000512271 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
FAM149A-212ENST00000512271 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
FAM149A-212ENST00000512271 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
FAM149A-212ENST00000512271 WDR62O43379 1518 aa17.18■□□□□ 0.34
FAM149A-212ENST00000512271 RSF1Q96T23 1441 aaPredicted RBP17.17■□□□□ 0.34
FAM149A-212ENST00000512271 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
FAM149A-212ENST00000512271 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
FAM149A-212ENST00000512271 CFTRP13569 1480 aa17.08■□□□□ 0.32
FAM149A-212ENST00000512271 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
FAM149A-212ENST00000512271 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
FAM149A-212ENST00000512271 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
FAM149A-212ENST00000512271 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
FAM149A-212ENST00000512271 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
FAM149A-212ENST00000512271 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
FAM149A-212ENST00000512271 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
FAM149A-212ENST00000512271 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
FAM149A-212ENST00000512271 CHD1O14646 1710 aa16.76■□□□□ 0.27
FAM149A-212ENST00000512271 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
FAM149A-212ENST00000512271 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
FAM149A-212ENST00000512271 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
FAM149A-212ENST00000512271 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
FAM149A-212ENST00000512271 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
FAM149A-212ENST00000512271 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
FAM149A-212ENST00000512271 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
FAM149A-212ENST00000512271 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
FAM149A-212ENST00000512271 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
FAM149A-212ENST00000512271 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
FAM149A-212ENST00000512271 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
FAM149A-212ENST00000512271 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
FAM149A-212ENST00000512271 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
FAM149A-212ENST00000512271 CUX1P39880 1505 aa16.53■□□□□ 0.24
FAM149A-212ENST00000512271 SOGA1O94964 1423 aa16.52■□□□□ 0.23
FAM149A-212ENST00000512271 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
FAM149A-212ENST00000512271 FBLN2P98095 1184 aa16.48■□□□□ 0.23
FAM149A-212ENST00000512271 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
FAM149A-212ENST00000512271 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
FAM149A-212ENST00000512271 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
FAM149A-212ENST00000512271 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
FAM149A-212ENST00000512271 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
FAM149A-212ENST00000512271 BIVM-ERCC5R4GMW8 1640 aa16.4■□□□□ 0.22
FAM149A-212ENST00000512271 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
FAM149A-212ENST00000512271 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
FAM149A-212ENST00000512271 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
FAM149A-212ENST00000512271 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
FAM149A-212ENST00000512271 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
FAM149A-212ENST00000512271 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
FAM149A-212ENST00000512271 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
FAM149A-212ENST00000512271 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
FAM149A-212ENST00000512271 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
FAM149A-212ENST00000512271 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
FAM149A-212ENST00000512271 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
FAM149A-212ENST00000512271 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
FAM149A-212ENST00000512271 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
FAM149A-212ENST00000512271 CEP170Q5SW79 1584 aa16.19■□□□□ 0.18
FAM149A-212ENST00000512271 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
FAM149A-212ENST00000512271 SHROOM2Q13796 1616 aa16.15■□□□□ 0.18
FAM149A-212ENST00000512271 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
FAM149A-212ENST00000512271 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
FAM149A-212ENST00000512271 NUP160Q12769 1436 aa16.11■□□□□ 0.17
FAM149A-212ENST00000512271 CUL7Q14999 1698 aa16.05■□□□□ 0.16
FAM149A-212ENST00000512271 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
FAM149A-212ENST00000512271 KIF13AQ9H1H9 1805 aa16.04■□□□□ 0.16
FAM149A-212ENST00000512271 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms