RNA–Protein interactions for RNA: ENST00000512221.2

PCDH12-203, Transcript of protocadherin 12, humanhuman

TSL 3

Gene PCDH12, Length 467 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-203ENST00000512221 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
PCDH12-203ENST00000512221 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
PCDH12-203ENST00000512221 ABCC9O60706 1549 aa17.43■□□□□ 0.38
PCDH12-203ENST00000512221 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
PCDH12-203ENST00000512221 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
PCDH12-203ENST00000512221 NACADO15069 1562 aa16.43■□□□□ 0.22
PCDH12-203ENST00000512221 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
PCDH12-203ENST00000512221 MYO15BQ96JP2 1530 aa16.18■□□□□ 0.18
PCDH12-203ENST00000512221 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
PCDH12-203ENST00000512221 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCDH12-203ENST00000512221 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
PCDH12-203ENST00000512221 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
PCDH12-203ENST00000512221 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
PCDH12-203ENST00000512221 DCAF1Q9Y4B6 1507 aa15.9■□□□□ 0.14
PCDH12-203ENST00000512221 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
PCDH12-203ENST00000512221 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
PCDH12-203ENST00000512221 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
PCDH12-203ENST00000512221 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
PCDH12-203ENST00000512221 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
PCDH12-203ENST00000512221 CUX2O14529 1486 aa15.16■□□□□ 0.02
PCDH12-203ENST00000512221 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
PCDH12-203ENST00000512221 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
PCDH12-203ENST00000512221 SMARCA4P51532 1647 aa15.08■□□□□ 0
PCDH12-203ENST00000512221 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
PCDH12-203ENST00000512221 ERCC6Q03468 1493 aa15.05■□□□□ -0
PCDH12-203ENST00000512221 SMARCA2P51531 1590 aa15.04■□□□□ -0
PCDH12-203ENST00000512221 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
PCDH12-203ENST00000512221 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
PCDH12-203ENST00000512221 NESP48681 1621 aa14.95□□□□□ -0.02
PCDH12-203ENST00000512221 BAZ1AQ9NRL2 1556 aaPredicted RBP14.94□□□□□ -0.02
PCDH12-203ENST00000512221 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
PCDH12-203ENST00000512221 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
PCDH12-203ENST00000512221 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
PCDH12-203ENST00000512221 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
PCDH12-203ENST00000512221 WDR62O43379 1518 aa14.68□□□□□ -0.06
PCDH12-203ENST00000512221 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
PCDH12-203ENST00000512221 WIZO95785 1651 aa14.65□□□□□ -0.06
PCDH12-203ENST00000512221 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
PCDH12-203ENST00000512221 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PCDH12-203ENST00000512221 CEP164Q9UPV0 1460 aa14.54□□□□□ -0.08
PCDH12-203ENST00000512221 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
PCDH12-203ENST00000512221 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
PCDH12-203ENST00000512221 CFTRP13569 1480 aa14.46□□□□□ -0.09
PCDH12-203ENST00000512221 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
PCDH12-203ENST00000512221 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
PCDH12-203ENST00000512221 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
PCDH12-203ENST00000512221 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
PCDH12-203ENST00000512221 RIMBP3CA6NJZ7 1639 aa14.31□□□□□ -0.12
PCDH12-203ENST00000512221 RIMBP3BA6NNM3 1639 aa14.31□□□□□ -0.12
PCDH12-203ENST00000512221 RIMBP3Q9UFD9 1639 aa14.31□□□□□ -0.12
PCDH12-203ENST00000512221 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
PCDH12-203ENST00000512221 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
PCDH12-203ENST00000512221 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
PCDH12-203ENST00000512221 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
PCDH12-203ENST00000512221 TOPBP1Q92547 1522 aa14.22□□□□□ -0.13
PCDH12-203ENST00000512221 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
PCDH12-203ENST00000512221 CHD1O14646 1710 aa14.21□□□□□ -0.14
PCDH12-203ENST00000512221 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
PCDH12-203ENST00000512221 DNMBPQ6XZF7 1577 aa14.19□□□□□ -0.14
PCDH12-203ENST00000512221 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
PCDH12-203ENST00000512221 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
PCDH12-203ENST00000512221 POLA1P09884 1462 aaPredicted RBP14.06□□□□□ -0.16
PCDH12-203ENST00000512221 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
PCDH12-203ENST00000512221 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
PCDH12-203ENST00000512221 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.16
PCDH12-203ENST00000512221 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
PCDH12-203ENST00000512221 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
PCDH12-203ENST00000512221 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
PCDH12-203ENST00000512221 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
PCDH12-203ENST00000512221 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
PCDH12-203ENST00000512221 CUX1P39880 1505 aa13.93□□□□□ -0.18
PCDH12-203ENST00000512221 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
PCDH12-203ENST00000512221 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
PCDH12-203ENST00000512221 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
PCDH12-203ENST00000512221 SOGA1O94964 1423 aa13.89□□□□□ -0.19
PCDH12-203ENST00000512221 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
PCDH12-203ENST00000512221 TDRD9Q8NDG6 1382 aaKnown RBP13.87□□□□□ -0.19
PCDH12-203ENST00000512221 SYNJ2O15056 1496 aa13.86□□□□□ -0.19
PCDH12-203ENST00000512221 GRIN2BQ13224 1484 aa13.86□□□□□ -0.19
PCDH12-203ENST00000512221 FBLN2P98095 1184 aa13.82□□□□□ -0.2
PCDH12-203ENST00000512221 GAPVD1Q14C86 1478 aa13.78□□□□□ -0.2
PCDH12-203ENST00000512221 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
PCDH12-203ENST00000512221 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
PCDH12-203ENST00000512221 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
PCDH12-203ENST00000512221 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
PCDH12-203ENST00000512221 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
PCDH12-203ENST00000512221 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
PCDH12-203ENST00000512221 CEP170Q5SW79 1584 aa13.73□□□□□ -0.21
PCDH12-203ENST00000512221 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
PCDH12-203ENST00000512221 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
PCDH12-203ENST00000512221 NUP160Q12769 1436 aa13.69□□□□□ -0.22
PCDH12-203ENST00000512221 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
PCDH12-203ENST00000512221 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
PCDH12-203ENST00000512221 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
PCDH12-203ENST00000512221 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
PCDH12-203ENST00000512221 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PCDH12-203ENST00000512221 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
PCDH12-203ENST00000512221 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
PCDH12-203ENST00000512221 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
PCDH12-203ENST00000512221 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 684 ms