RNA–Protein interactions for RNA: ENST00000512189.1

LETM1-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 3

Gene LETM1, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-206ENST00000512189 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
LETM1-206ENST00000512189 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
LETM1-206ENST00000512189 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
LETM1-206ENST00000512189 ABCC9O60706 1549 aa30.05■■■□□ 2.4
LETM1-206ENST00000512189 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
LETM1-206ENST00000512189 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
LETM1-206ENST00000512189 NACADO15069 1562 aa29.47■■■□□ 2.31
LETM1-206ENST00000512189 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
LETM1-206ENST00000512189 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
LETM1-206ENST00000512189 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
LETM1-206ENST00000512189 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
LETM1-206ENST00000512189 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
LETM1-206ENST00000512189 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
LETM1-206ENST00000512189 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
LETM1-206ENST00000512189 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
LETM1-206ENST00000512189 BAZ1AQ9NRL2 1556 aaPredicted RBP27.78■■■□□ 2.04
LETM1-206ENST00000512189 SMARCA4P51532 1647 aa27.7■■■□□ 2.03
LETM1-206ENST00000512189 MROH2BQ7Z745 1585 aa27.69■■■□□ 2.02
LETM1-206ENST00000512189 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
LETM1-206ENST00000512189 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
LETM1-206ENST00000512189 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
LETM1-206ENST00000512189 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
LETM1-206ENST00000512189 WIZO95785 1651 aa27.42■■□□□ 1.98
LETM1-206ENST00000512189 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
LETM1-206ENST00000512189 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
LETM1-206ENST00000512189 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
LETM1-206ENST00000512189 TOP2AP11388 1531 aaKnown RBP27.22■■□□□ 1.95
LETM1-206ENST00000512189 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
LETM1-206ENST00000512189 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
LETM1-206ENST00000512189 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
LETM1-206ENST00000512189 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
LETM1-206ENST00000512189 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
LETM1-206ENST00000512189 CFTRP13569 1480 aa26.46■■□□□ 1.83
LETM1-206ENST00000512189 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
LETM1-206ENST00000512189 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
LETM1-206ENST00000512189 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
LETM1-206ENST00000512189 NESP48681 1621 aa26.27■■□□□ 1.8
LETM1-206ENST00000512189 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
LETM1-206ENST00000512189 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
LETM1-206ENST00000512189 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
LETM1-206ENST00000512189 PDS5BQ9NTI5 1447 aa26.09■■□□□ 1.77
LETM1-206ENST00000512189 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
LETM1-206ENST00000512189 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
LETM1-206ENST00000512189 SYNJ1O43426 1573 aa25.99■■□□□ 1.75
LETM1-206ENST00000512189 KIF21AQ7Z4S6 1674 aa25.98■■□□□ 1.75
LETM1-206ENST00000512189 CUX1P39880 1505 aa25.94■■□□□ 1.74
LETM1-206ENST00000512189 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
LETM1-206ENST00000512189 BIVM-ERCC5R4GMW8 1640 aa25.94■■□□□ 1.74
LETM1-206ENST00000512189 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
LETM1-206ENST00000512189 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
LETM1-206ENST00000512189 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
LETM1-206ENST00000512189 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
LETM1-206ENST00000512189 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
LETM1-206ENST00000512189 TOPBP1Q92547 1522 aa25.82■■□□□ 1.72
LETM1-206ENST00000512189 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
LETM1-206ENST00000512189 WDR62O43379 1518 aa25.73■■□□□ 1.71
LETM1-206ENST00000512189 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
LETM1-206ENST00000512189 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
LETM1-206ENST00000512189 SOGA1O94964 1423 aa25.54■■□□□ 1.68
LETM1-206ENST00000512189 EEA1Q15075 1411 aa25.52■■□□□ 1.68
LETM1-206ENST00000512189 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
LETM1-206ENST00000512189 CUX2O14529 1486 aa25.51■■□□□ 1.67
LETM1-206ENST00000512189 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
LETM1-206ENST00000512189 WDR97A6NE52 1622 aa25.51■■□□□ 1.67
LETM1-206ENST00000512189 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
LETM1-206ENST00000512189 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
LETM1-206ENST00000512189 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
LETM1-206ENST00000512189 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
LETM1-206ENST00000512189 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
LETM1-206ENST00000512189 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
LETM1-206ENST00000512189 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
LETM1-206ENST00000512189 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
LETM1-206ENST00000512189 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
LETM1-206ENST00000512189 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
LETM1-206ENST00000512189 KIF21BO75037 1637 aa25.23■■□□□ 1.63
LETM1-206ENST00000512189 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
LETM1-206ENST00000512189 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
LETM1-206ENST00000512189 IGF1RP08069 1367 aa25.21■■□□□ 1.63
LETM1-206ENST00000512189 PRXQ9BXM0 1461 aa25.2■■□□□ 1.62
LETM1-206ENST00000512189 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.62
LETM1-206ENST00000512189 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
LETM1-206ENST00000512189 CUL7Q14999 1698 aa25.15■■□□□ 1.62
LETM1-206ENST00000512189 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
LETM1-206ENST00000512189 GOLGA3Q08378 1498 aa25.12■■□□□ 1.61
LETM1-206ENST00000512189 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.6
LETM1-206ENST00000512189 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
LETM1-206ENST00000512189 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
LETM1-206ENST00000512189 LOC105371045A0A1W2PR82 267 aa25.04■■□□□ 1.6
LETM1-206ENST00000512189 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
LETM1-206ENST00000512189 FHAD1B1AJZ9 1412 aa25.01■■□□□ 1.59
LETM1-206ENST00000512189 MAGI1Q96QZ7 1491 aaPredicted RBP25.01■■□□□ 1.59
LETM1-206ENST00000512189 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
LETM1-206ENST00000512189 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
LETM1-206ENST00000512189 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
LETM1-206ENST00000512189 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
LETM1-206ENST00000512189 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
LETM1-206ENST00000512189 CTTNBP2Q8WZ74 1663 aa24.78■■□□□ 1.56
LETM1-206ENST00000512189 CEP162Q5TB80 1403 aa24.77■■□□□ 1.56
LETM1-206ENST00000512189 NUP160Q12769 1436 aa24.72■■□□□ 1.55
LETM1-206ENST00000512189 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms