RNA–Protein interactions for RNA: ENST00000512086.5

CAGE1-208, Transcript of cancer antigen 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAGE1, Length 2,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-208ENST00000512086 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
CAGE1-208ENST00000512086 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
CAGE1-208ENST00000512086 ABCC9O60706 1549 aa16.45■□□□□ 0.22
CAGE1-208ENST00000512086 RB1CC1Q8TDY2 1594 aa15.85■□□□□ 0.13
CAGE1-208ENST00000512086 NACADO15069 1562 aa15.8■□□□□ 0.12
CAGE1-208ENST00000512086 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
CAGE1-208ENST00000512086 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
CAGE1-208ENST00000512086 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.07
CAGE1-208ENST00000512086 UNC13AQ9UPW8 1703 aa15.47■□□□□ 0.07
CAGE1-208ENST00000512086 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
CAGE1-208ENST00000512086 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
CAGE1-208ENST00000512086 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
CAGE1-208ENST00000512086 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.03
CAGE1-208ENST00000512086 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.03
CAGE1-208ENST00000512086 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
CAGE1-208ENST00000512086 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
CAGE1-208ENST00000512086 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
CAGE1-208ENST00000512086 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
CAGE1-208ENST00000512086 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
CAGE1-208ENST00000512086 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
CAGE1-208ENST00000512086 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
CAGE1-208ENST00000512086 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
CAGE1-208ENST00000512086 HMGXB3Q12766 1538 aa14.5□□□□□ -0.09
CAGE1-208ENST00000512086 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
CAGE1-208ENST00000512086 PEG3Q9GZU2 1588 aa14.46□□□□□ -0.09
CAGE1-208ENST00000512086 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
CAGE1-208ENST00000512086 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
CAGE1-208ENST00000512086 CUX2O14529 1486 aa14.26□□□□□ -0.13
CAGE1-208ENST00000512086 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
CAGE1-208ENST00000512086 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
CAGE1-208ENST00000512086 NESP48681 1621 aa14.17□□□□□ -0.14
CAGE1-208ENST00000512086 WIZO95785 1651 aa14.16□□□□□ -0.14
CAGE1-208ENST00000512086 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
CAGE1-208ENST00000512086 PDS5BQ9NTI5 1447 aa14.1□□□□□ -0.15
CAGE1-208ENST00000512086 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
CAGE1-208ENST00000512086 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
CAGE1-208ENST00000512086 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
CAGE1-208ENST00000512086 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
CAGE1-208ENST00000512086 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
CAGE1-208ENST00000512086 CFTRP13569 1480 aa13.98□□□□□ -0.17
CAGE1-208ENST00000512086 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
CAGE1-208ENST00000512086 WDR62O43379 1518 aa13.96□□□□□ -0.17
CAGE1-208ENST00000512086 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
CAGE1-208ENST00000512086 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
CAGE1-208ENST00000512086 FANCD2Q9BXW9 1451 aa13.91□□□□□ -0.18
CAGE1-208ENST00000512086 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
CAGE1-208ENST00000512086 URB2Q14146 1524 aaKnown RBP13.78□□□□□ -0.2
CAGE1-208ENST00000512086 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
CAGE1-208ENST00000512086 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
CAGE1-208ENST00000512086 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
CAGE1-208ENST00000512086 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
CAGE1-208ENST00000512086 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
CAGE1-208ENST00000512086 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
CAGE1-208ENST00000512086 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
CAGE1-208ENST00000512086 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
CAGE1-208ENST00000512086 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
CAGE1-208ENST00000512086 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
CAGE1-208ENST00000512086 CUX1P39880 1505 aa13.47□□□□□ -0.25
CAGE1-208ENST00000512086 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
CAGE1-208ENST00000512086 SOGA1O94964 1423 aa13.45□□□□□ -0.26
CAGE1-208ENST00000512086 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAGE1-208ENST00000512086 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
CAGE1-208ENST00000512086 CHD1O14646 1710 aa13.41□□□□□ -0.26
CAGE1-208ENST00000512086 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
CAGE1-208ENST00000512086 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
CAGE1-208ENST00000512086 RIMBP3CA6NJZ7 1639 aa13.38□□□□□ -0.27
CAGE1-208ENST00000512086 RIMBP3BA6NNM3 1639 aa13.38□□□□□ -0.27
CAGE1-208ENST00000512086 RIMBP3Q9UFD9 1639 aa13.38□□□□□ -0.27
CAGE1-208ENST00000512086 ABCA10Q8WWZ4 1543 aa13.36□□□□□ -0.27
CAGE1-208ENST00000512086 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
CAGE1-208ENST00000512086 BIVM-ERCC5R4GMW8 1640 aa13.36□□□□□ -0.27
CAGE1-208ENST00000512086 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
CAGE1-208ENST00000512086 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
CAGE1-208ENST00000512086 SNAPC4Q5SXM2 1469 aa13.34□□□□□ -0.27
CAGE1-208ENST00000512086 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
CAGE1-208ENST00000512086 ABCA5Q8WWZ7 1642 aa13.34□□□□□ -0.27
CAGE1-208ENST00000512086 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
CAGE1-208ENST00000512086 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
CAGE1-208ENST00000512086 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
CAGE1-208ENST00000512086 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
CAGE1-208ENST00000512086 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
CAGE1-208ENST00000512086 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
CAGE1-208ENST00000512086 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
CAGE1-208ENST00000512086 FBLN2P98095 1184 aa13.23□□□□□ -0.29
CAGE1-208ENST00000512086 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
CAGE1-208ENST00000512086 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
CAGE1-208ENST00000512086 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
CAGE1-208ENST00000512086 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.29
CAGE1-208ENST00000512086 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
CAGE1-208ENST00000512086 FHAD1B1AJZ9 1412 aa13.17□□□□□ -0.3
CAGE1-208ENST00000512086 NUP160Q12769 1436 aa13.17□□□□□ -0.3
CAGE1-208ENST00000512086 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
CAGE1-208ENST00000512086 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
CAGE1-208ENST00000512086 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
CAGE1-208ENST00000512086 CUL7Q14999 1698 aa13.06□□□□□ -0.32
CAGE1-208ENST00000512086 KIF27Q86VH2 1401 aa13.04□□□□□ -0.32
CAGE1-208ENST00000512086 RUSC2Q8N2Y8 1516 aa13.02□□□□□ -0.32
CAGE1-208ENST00000512086 ERCC6L2Q5T890 1561 aa13.01□□□□□ -0.33
CAGE1-208ENST00000512086 IGF1RP08069 1367 aa13□□□□□ -0.33
CAGE1-208ENST00000512086 KIAA0586Q9BVV6 1533 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms