RNA–Protein interactions for RNA: ENST00000512008.5

CDK18-220, Transcript of cyclin dependent kinase 18, humanhuman

TSL 4

Gene CDK18, Length 582 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-220ENST00000512008 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
CDK18-220ENST00000512008 ABCC9O60706 1549 aa25.21■■□□□ 1.63
CDK18-220ENST00000512008 CCDC180Q9P1Z9 1646 aa25.16■■□□□ 1.62
CDK18-220ENST00000512008 RB1CC1Q8TDY2 1594 aa23.98■■□□□ 1.43
CDK18-220ENST00000512008 NACADO15069 1562 aa23.82■■□□□ 1.4
CDK18-220ENST00000512008 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
CDK18-220ENST00000512008 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
CDK18-220ENST00000512008 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
CDK18-220ENST00000512008 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.356e-7■■□□□ 12
CDK18-220ENST00000512008 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
CDK18-220ENST00000512008 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
CDK18-220ENST00000512008 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
CDK18-220ENST00000512008 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
CDK18-220ENST00000512008 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
CDK18-220ENST00000512008 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
CDK18-220ENST00000512008 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
CDK18-220ENST00000512008 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
CDK18-220ENST00000512008 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
CDK18-220ENST00000512008 NCAPD3P42695 1498 aa22■■□□□ 1.11
CDK18-220ENST00000512008 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
CDK18-220ENST00000512008 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
CDK18-220ENST00000512008 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
CDK18-220ENST00000512008 HMGXB3Q12766 1538 aa21.82■■□□□ 1.08
CDK18-220ENST00000512008 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
CDK18-220ENST00000512008 ERCC6Q03468 1493 aa21.77■■□□□ 1.07
CDK18-220ENST00000512008 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
CDK18-220ENST00000512008 CUX2O14529 1486 aa21.72■■□□□ 1.07
CDK18-220ENST00000512008 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
CDK18-220ENST00000512008 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
CDK18-220ENST00000512008 NESP48681 1621 aa21.65■■□□□ 1.06
CDK18-220ENST00000512008 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
CDK18-220ENST00000512008 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
CDK18-220ENST00000512008 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
CDK18-220ENST00000512008 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.02
CDK18-220ENST00000512008 WIZO95785 1651 aa21.36■■□□□ 1.01
CDK18-220ENST00000512008 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
CDK18-220ENST00000512008 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
CDK18-220ENST00000512008 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
CDK18-220ENST00000512008 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
CDK18-220ENST00000512008 WDR62O43379 1518 aa21.13■□□□□ 0.97
CDK18-220ENST00000512008 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
CDK18-220ENST00000512008 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
CDK18-220ENST00000512008 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
CDK18-220ENST00000512008 CFTRP13569 1480 aa21.08■□□□□ 0.97
CDK18-220ENST00000512008 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
CDK18-220ENST00000512008 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
CDK18-220ENST00000512008 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
CDK18-220ENST00000512008 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
CDK18-220ENST00000512008 OSCARQ8IYS5 282 aa20.77■□□□□ 0.92
CDK18-220ENST00000512008 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
CDK18-220ENST00000512008 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
CDK18-220ENST00000512008 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
CDK18-220ENST00000512008 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
CDK18-220ENST00000512008 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
CDK18-220ENST00000512008 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
CDK18-220ENST00000512008 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
CDK18-220ENST00000512008 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
CDK18-220ENST00000512008 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
CDK18-220ENST00000512008 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
CDK18-220ENST00000512008 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
CDK18-220ENST00000512008 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
CDK18-220ENST00000512008 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
CDK18-220ENST00000512008 SOGA1O94964 1423 aa20.4■□□□□ 0.86
CDK18-220ENST00000512008 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
CDK18-220ENST00000512008 FBLN2P98095 1184 aa20.37■□□□□ 0.85
CDK18-220ENST00000512008 CHD1O14646 1710 aa20.36■□□□□ 0.85
CDK18-220ENST00000512008 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
CDK18-220ENST00000512008 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
CDK18-220ENST00000512008 CUX1P39880 1505 aa20.32■□□□□ 0.84
CDK18-220ENST00000512008 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
CDK18-220ENST00000512008 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
CDK18-220ENST00000512008 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
CDK18-220ENST00000512008 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
CDK18-220ENST00000512008 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
CDK18-220ENST00000512008 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
CDK18-220ENST00000512008 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
CDK18-220ENST00000512008 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
CDK18-220ENST00000512008 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
CDK18-220ENST00000512008 SYNJ2O15056 1496 aa20.14■□□□□ 0.81
CDK18-220ENST00000512008 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
CDK18-220ENST00000512008 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
CDK18-220ENST00000512008 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
CDK18-220ENST00000512008 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
CDK18-220ENST00000512008 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
CDK18-220ENST00000512008 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
CDK18-220ENST00000512008 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
CDK18-220ENST00000512008 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
CDK18-220ENST00000512008 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
CDK18-220ENST00000512008 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
CDK18-220ENST00000512008 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
CDK18-220ENST00000512008 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
CDK18-220ENST00000512008 NUP160Q12769 1436 aa19.88■□□□□ 0.77
CDK18-220ENST00000512008 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
CDK18-220ENST00000512008 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
CDK18-220ENST00000512008 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.77
CDK18-220ENST00000512008 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
CDK18-220ENST00000512008 JPH4Q96JJ6 628 aa19.72■□□□□ 0.75
CDK18-220ENST00000512008 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
CDK18-220ENST00000512008 IGF1RP08069 1367 aa19.63■□□□□ 0.73
CDK18-220ENST00000512008 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms