RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 NISCHQ9Y2I1 1504 aa42.62■■■■■ 4.41
APBB3-219ENST00000511896 CCDC180Q9P1Z9 1646 aa36.93■■■■□ 3.5
APBB3-219ENST00000511896 ZCCHC6Q5VYS8 1495 aaKnown RBP35.85■■■■□ 3.33
APBB3-219ENST00000511896 DCAF8L2P0C7V8 631 aa35.23■■■■□ 3.23
APBB3-219ENST00000511896 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
APBB3-219ENST00000511896 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
APBB3-219ENST00000511896 ABCC9O60706 1549 aa34.79■■■■□ 3.16
APBB3-219ENST00000511896 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
APBB3-219ENST00000511896 NACADO15069 1562 aa34.36■■■■□ 3.09
APBB3-219ENST00000511896 SCRIBQ14160 1630 aa34.09■■■■□ 3.05
APBB3-219ENST00000511896 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
APBB3-219ENST00000511896 SUPT5HO00267 1087 aaKnown RBP33.93■■■■□ 3.02
APBB3-219ENST00000511896 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
APBB3-219ENST00000511896 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
APBB3-219ENST00000511896 CECR2Q9BXF3 1484 aa33.15■■■□□ 2.9
APBB3-219ENST00000511896 BICRAQ9NZM4 1560 aa33.02■■■□□ 2.88
APBB3-219ENST00000511896 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
APBB3-219ENST00000511896 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
APBB3-219ENST00000511896 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
APBB3-219ENST00000511896 WIZO95785 1651 aa32.71■■■□□ 2.83
APBB3-219ENST00000511896 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
APBB3-219ENST00000511896 CHIC1Q5VXU3 224 aa32.61■■■□□ 2.81
APBB3-219ENST00000511896 TOP2AP11388 1531 aaKnown RBP32.33■■■□□ 2.77
APBB3-219ENST00000511896 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
APBB3-219ENST00000511896 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
APBB3-219ENST00000511896 CCDC88BA6NC98 1476 aa32.06■■■□□ 2.72
APBB3-219ENST00000511896 SMARCA2P51531 1590 aa32.06■■■□□ 2.72
APBB3-219ENST00000511896 EIF4G1Q04637 1599 aaKnown RBP31.99■■■□□ 2.71
APBB3-219ENST00000511896 BAZ1BQ9UIG0 1483 aaKnown RBP31.92■■■□□ 2.7
APBB3-219ENST00000511896 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
APBB3-219ENST00000511896 NCAPD3P42695 1498 aa31.76■■■□□ 2.68
APBB3-219ENST00000511896 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
APBB3-219ENST00000511896 ABCC8Q09428 1581 aa31.5■■■□□ 2.63
APBB3-219ENST00000511896 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
APBB3-219ENST00000511896 LOC105371045A0A1W2PR82 267 aa31.42■■■□□ 2.62
APBB3-219ENST00000511896 FAM9AQ8IZU1 332 aaPredicted RBP31.31■■■□□ 2.6
APBB3-219ENST00000511896 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
APBB3-219ENST00000511896 CFTRP13569 1480 aa31.15■■■□□ 2.58
APBB3-219ENST00000511896 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
APBB3-219ENST00000511896 SOGA1O94964 1423 aa31■■■□□ 2.55
APBB3-219ENST00000511896 CADPSQ9ULU8 1353 aa31■■■□□ 2.55
APBB3-219ENST00000511896 TOP2BQ02880 1626 aa30.92■■■□□ 2.54
APBB3-219ENST00000511896 EEA1Q15075 1411 aa30.92■■■□□ 2.54
APBB3-219ENST00000511896 PRDM2Q13029 1718 aa30.91■■■□□ 2.54
APBB3-219ENST00000511896 EHMT2Q96KQ7 1210 aa30.89■■■□□ 2.54
APBB3-219ENST00000511896 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
APBB3-219ENST00000511896 BIVM-ERCC5R4GMW8 1640 aa30.86■■■□□ 2.53
APBB3-219ENST00000511896 CSRNP3Q8WYN3 585 aa30.8■■■□□ 2.52
APBB3-219ENST00000511896 CUX1P39880 1505 aa30.8■■■□□ 2.52
APBB3-219ENST00000511896 DNAJC5BQ9UF47 199 aa30.71■■■□□ 2.51
APBB3-219ENST00000511896 NESP48681 1621 aa30.65■■■□□ 2.5
APBB3-219ENST00000511896 FANCD2Q9BXW9 1451 aa30.64■■■□□ 2.5
APBB3-219ENST00000511896 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
APBB3-219ENST00000511896 GOLGA3Q08378 1498 aa30.52■■■□□ 2.48
APBB3-219ENST00000511896 TNIKQ9UKE5 1360 aa30.51■■■□□ 2.47
APBB3-219ENST00000511896 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
APBB3-219ENST00000511896 KIF21BO75037 1637 aa30.49■■■□□ 2.47
APBB3-219ENST00000511896 UBTFP17480 764 aaKnown RBP30.45■■■□□ 2.46
APBB3-219ENST00000511896 KIF27Q86VH2 1401 aa30.42■■■□□ 2.46
APBB3-219ENST00000511896 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
APBB3-219ENST00000511896 CEP162Q5TB80 1403 aa30.38■■■□□ 2.45
APBB3-219ENST00000511896 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
APBB3-219ENST00000511896 DNMBPQ6XZF7 1577 aa30.38■■■□□ 2.45
APBB3-219ENST00000511896 TOPBP1Q92547 1522 aa30.34■■■□□ 2.45
APBB3-219ENST00000511896 RAPGEF2Q9Y4G8 1499 aa30.33■■■□□ 2.45
APBB3-219ENST00000511896 PRXQ9BXM0 1461 aa30.3■■■□□ 2.44
APBB3-219ENST00000511896 PCGF6Q9BYE7 350 aa30.29■■■□□ 2.44
APBB3-219ENST00000511896 CUX2O14529 1486 aa30.28■■■□□ 2.44
APBB3-219ENST00000511896 URB2Q14146 1524 aaKnown RBP30.25■■■□□ 2.43
APBB3-219ENST00000511896 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
APBB3-219ENST00000511896 POLA1P09884 1462 aaPredicted RBP30.23■■■□□ 2.43
APBB3-219ENST00000511896 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
APBB3-219ENST00000511896 TRIM26Q12899 539 aaPredicted RBP30.17■■■□□ 2.42
APBB3-219ENST00000511896 IGF1RP08069 1367 aa30.16■■■□□ 2.42
APBB3-219ENST00000511896 RAD54L2Q9Y4B4 1467 aa30.16■■■□□ 2.42
APBB3-219ENST00000511896 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.41
APBB3-219ENST00000511896 CLIP1P30622 1438 aa30.07■■■□□ 2.4
APBB3-219ENST00000511896 CARMIL1Q5VZK9 1371 aa30■■■□□ 2.39
APBB3-219ENST00000511896 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
APBB3-219ENST00000511896 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
APBB3-219ENST00000511896 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
APBB3-219ENST00000511896 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
APBB3-219ENST00000511896 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
APBB3-219ENST00000511896 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
APBB3-219ENST00000511896 VPS8Q8N3P4 1428 aa29.84■■■□□ 2.37
APBB3-219ENST00000511896 ABCA5Q8WWZ7 1642 aa29.84■■■□□ 2.37
APBB3-219ENST00000511896 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
APBB3-219ENST00000511896 CUL7Q14999 1698 aa29.8■■■□□ 2.36
APBB3-219ENST00000511896 WDR62O43379 1518 aa29.78■■■□□ 2.36
APBB3-219ENST00000511896 ERCC6Q03468 1493 aa29.76■■■□□ 2.35
APBB3-219ENST00000511896 ARAP1Q96P48 1450 aa29.73■■■□□ 2.35
APBB3-219ENST00000511896 ARHGAP35Q9NRY4 1499 aa29.68■■■□□ 2.34
APBB3-219ENST00000511896 IFT140Q96RY7 1462 aa29.64■■■□□ 2.34
APBB3-219ENST00000511896 HRCP23327 699 aa29.64■■■□□ 2.33
APBB3-219ENST00000511896 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
APBB3-219ENST00000511896 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
APBB3-219ENST00000511896 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.332e-6■■■■■ 39.8
APBB3-219ENST00000511896 APLP2Q06481 763 aa29.57■■■□□ 2.32
APBB3-219ENST00000511896 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
APBB3-219ENST00000511896 ZNF608Q9ULD9 1512 aaPredicted RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms