RNA–Protein interactions for RNA: ENST00000511886.5

TMEM173-210, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-210ENST00000511886 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
TMEM173-210ENST00000511886 ABCC9O60706 1549 aa31.49■■■□□ 2.63
TMEM173-210ENST00000511886 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
TMEM173-210ENST00000511886 DNAJC5BQ9UF47 199 aa29.98■■■□□ 2.39
TMEM173-210ENST00000511886 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
TMEM173-210ENST00000511886 NACADO15069 1562 aa29.43■■■□□ 2.3
TMEM173-210ENST00000511886 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
TMEM173-210ENST00000511886 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
TMEM173-210ENST00000511886 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
TMEM173-210ENST00000511886 BICRAQ9NZM4 1560 aa28.9■■■□□ 2.22
TMEM173-210ENST00000511886 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
TMEM173-210ENST00000511886 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
TMEM173-210ENST00000511886 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
TMEM173-210ENST00000511886 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
TMEM173-210ENST00000511886 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
TMEM173-210ENST00000511886 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
TMEM173-210ENST00000511886 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
TMEM173-210ENST00000511886 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
TMEM173-210ENST00000511886 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
TMEM173-210ENST00000511886 CUX2O14529 1486 aa27.44■■□□□ 1.98
TMEM173-210ENST00000511886 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
TMEM173-210ENST00000511886 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
TMEM173-210ENST00000511886 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
TMEM173-210ENST00000511886 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
TMEM173-210ENST00000511886 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
TMEM173-210ENST00000511886 NESP48681 1621 aa26.87■■□□□ 1.89
TMEM173-210ENST00000511886 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
TMEM173-210ENST00000511886 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
TMEM173-210ENST00000511886 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
TMEM173-210ENST00000511886 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
TMEM173-210ENST00000511886 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
TMEM173-210ENST00000511886 PEG3Q9GZU2 1588 aa26.58■■□□□ 1.85
TMEM173-210ENST00000511886 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
TMEM173-210ENST00000511886 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
TMEM173-210ENST00000511886 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
TMEM173-210ENST00000511886 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
TMEM173-210ENST00000511886 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
TMEM173-210ENST00000511886 WDR62O43379 1518 aa26.29■■□□□ 1.8
TMEM173-210ENST00000511886 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
TMEM173-210ENST00000511886 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
TMEM173-210ENST00000511886 OSCARQ8IYS5 282 aa26.01■■□□□ 1.75
TMEM173-210ENST00000511886 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
TMEM173-210ENST00000511886 WIZO95785 1651 aa25.98■■□□□ 1.75
TMEM173-210ENST00000511886 CFTRP13569 1480 aa25.86■■□□□ 1.73
TMEM173-210ENST00000511886 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
TMEM173-210ENST00000511886 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
TMEM173-210ENST00000511886 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
TMEM173-210ENST00000511886 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
TMEM173-210ENST00000511886 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
TMEM173-210ENST00000511886 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
TMEM173-210ENST00000511886 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
TMEM173-210ENST00000511886 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
TMEM173-210ENST00000511886 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
TMEM173-210ENST00000511886 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
TMEM173-210ENST00000511886 EIF4G3O43432 1585 aaKnown RBP25.47■■□□□ 1.67
TMEM173-210ENST00000511886 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
TMEM173-210ENST00000511886 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
TMEM173-210ENST00000511886 CHD1O14646 1710 aa25.38■■□□□ 1.65
TMEM173-210ENST00000511886 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
TMEM173-210ENST00000511886 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
TMEM173-210ENST00000511886 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
TMEM173-210ENST00000511886 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
TMEM173-210ENST00000511886 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
TMEM173-210ENST00000511886 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
TMEM173-210ENST00000511886 AQRO60306 1485 aaKnown RBP eCLIP25.23■■□□□ 1.631e-8■■■■■ 34.4
TMEM173-210ENST00000511886 FBLN2P98095 1184 aa25.17■■□□□ 1.62
TMEM173-210ENST00000511886 POLA1P09884 1462 aaPredicted RBP25.14■■□□□ 1.61
TMEM173-210ENST00000511886 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
TMEM173-210ENST00000511886 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
TMEM173-210ENST00000511886 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
TMEM173-210ENST00000511886 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
TMEM173-210ENST00000511886 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
TMEM173-210ENST00000511886 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
TMEM173-210ENST00000511886 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
TMEM173-210ENST00000511886 SOGA1O94964 1423 aa24.97■■□□□ 1.59
TMEM173-210ENST00000511886 MAGI1Q96QZ7 1491 aaPredicted RBP24.95■■□□□ 1.58
TMEM173-210ENST00000511886 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
TMEM173-210ENST00000511886 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.57
TMEM173-210ENST00000511886 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
TMEM173-210ENST00000511886 GRIN2BQ13224 1484 aa24.86■■□□□ 1.57
TMEM173-210ENST00000511886 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
TMEM173-210ENST00000511886 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
TMEM173-210ENST00000511886 CUX1P39880 1505 aa24.76■■□□□ 1.55
TMEM173-210ENST00000511886 ABCA5Q8WWZ7 1642 aa24.63■■□□□ 1.53
TMEM173-210ENST00000511886 ERCC6L2Q5T890 1561 aa24.59■■□□□ 1.53
TMEM173-210ENST00000511886 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
TMEM173-210ENST00000511886 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
TMEM173-210ENST00000511886 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
TMEM173-210ENST00000511886 NUP160Q12769 1436 aa24.49■■□□□ 1.51
TMEM173-210ENST00000511886 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
TMEM173-210ENST00000511886 KIF13AQ9H1H9 1805 aa24.49■■□□□ 1.51
TMEM173-210ENST00000511886 SHROOM2Q13796 1616 aa24.48■■□□□ 1.51
TMEM173-210ENST00000511886 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
TMEM173-210ENST00000511886 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
TMEM173-210ENST00000511886 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
TMEM173-210ENST00000511886 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
TMEM173-210ENST00000511886 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
TMEM173-210ENST00000511886 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
TMEM173-210ENST00000511886 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
TMEM173-210ENST00000511886 MAPKBP1O60336 1514 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms