RNA–Protein interactions for RNA: ENST00000511850.1

TMEM173-209, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 890 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-209ENST00000511850 NISCHQ9Y2I1 1504 aa41.71■■■■■ 4.27
TMEM173-209ENST00000511850 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
TMEM173-209ENST00000511850 ABCC9O60706 1549 aa36.03■■■■□ 3.36
TMEM173-209ENST00000511850 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
TMEM173-209ENST00000511850 NACADO15069 1562 aa34.83■■■■□ 3.17
TMEM173-209ENST00000511850 ZCCHC6Q5VYS8 1495 aaKnown RBP34.8■■■■□ 3.16
TMEM173-209ENST00000511850 DCAF8L2P0C7V8 631 aa34.7■■■■□ 3.15
TMEM173-209ENST00000511850 MYO15BQ96JP2 1530 aa34.67■■■■□ 3.14
TMEM173-209ENST00000511850 DCAF1Q9Y4B6 1507 aa34.57■■■■□ 3.12
TMEM173-209ENST00000511850 UNC13AQ9UPW8 1703 aa34■■■■□ 3.03
TMEM173-209ENST00000511850 SCRIBQ14160 1630 aa33.8■■■■□ 3
TMEM173-209ENST00000511850 BICRAQ9NZM4 1560 aa33.67■■■□□ 2.98
TMEM173-209ENST00000511850 PABPN1Q86U42 306 aaKnown RBP eCLIP33.62■■■□□ 2.97
TMEM173-209ENST00000511850 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
TMEM173-209ENST00000511850 EIF4G1Q04637 1599 aaKnown RBP32.82■■■□□ 2.84
TMEM173-209ENST00000511850 DNAJC5BQ9UF47 199 aa32.76■■■□□ 2.83
TMEM173-209ENST00000511850 CC2D2AQ9P2K1 1620 aa32.64■■■□□ 2.82
TMEM173-209ENST00000511850 CECR2Q9BXF3 1484 aa32.4■■■□□ 2.78
TMEM173-209ENST00000511850 BAZ1AQ9NRL2 1556 aaPredicted RBP32.38■■■□□ 2.77
TMEM173-209ENST00000511850 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
TMEM173-209ENST00000511850 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
TMEM173-209ENST00000511850 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
TMEM173-209ENST00000511850 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
TMEM173-209ENST00000511850 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
TMEM173-209ENST00000511850 PEG3Q9GZU2 1588 aa32.05■■■□□ 2.72
TMEM173-209ENST00000511850 HMGXB3Q12766 1538 aa32■■■□□ 2.71
TMEM173-209ENST00000511850 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
TMEM173-209ENST00000511850 WIZO95785 1651 aa31.8■■■□□ 2.68
TMEM173-209ENST00000511850 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
TMEM173-209ENST00000511850 TOP2AP11388 1531 aaKnown RBP31.53■■■□□ 2.64
TMEM173-209ENST00000511850 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
TMEM173-209ENST00000511850 NESP48681 1621 aa31.19■■■□□ 2.58
TMEM173-209ENST00000511850 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
TMEM173-209ENST00000511850 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
TMEM173-209ENST00000511850 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
TMEM173-209ENST00000511850 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
TMEM173-209ENST00000511850 PDS5BQ9NTI5 1447 aa31.02■■■□□ 2.56
TMEM173-209ENST00000511850 CFTRP13569 1480 aa30.99■■■□□ 2.55
TMEM173-209ENST00000511850 KIF21AQ7Z4S6 1674 aa30.92■■■□□ 2.54
TMEM173-209ENST00000511850 PRDM2Q13029 1718 aa30.9■■■□□ 2.54
TMEM173-209ENST00000511850 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
TMEM173-209ENST00000511850 CEP164Q9UPV0 1460 aa30.78■■■□□ 2.52
TMEM173-209ENST00000511850 THOC2Q8NI27 1593 aaKnown RBP30.78■■■□□ 2.52
TMEM173-209ENST00000511850 CUX2O14529 1486 aa30.74■■■□□ 2.51
TMEM173-209ENST00000511850 MRC2Q9UBG0 1479 aa30.7■■■□□ 2.5
TMEM173-209ENST00000511850 WDR62O43379 1518 aa30.59■■■□□ 2.49
TMEM173-209ENST00000511850 URB2Q14146 1524 aaKnown RBP30.45■■■□□ 2.47
TMEM173-209ENST00000511850 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
TMEM173-209ENST00000511850 DNMBPQ6XZF7 1577 aa30.35■■■□□ 2.45
TMEM173-209ENST00000511850 TOPBP1Q92547 1522 aa30.32■■■□□ 2.44
TMEM173-209ENST00000511850 CUX1P39880 1505 aa30.13■■■□□ 2.41
TMEM173-209ENST00000511850 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
TMEM173-209ENST00000511850 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
TMEM173-209ENST00000511850 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
TMEM173-209ENST00000511850 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
TMEM173-209ENST00000511850 BIVM-ERCC5R4GMW8 1640 aa29.99■■■□□ 2.39
TMEM173-209ENST00000511850 TARBP1Q13395 1621 aaKnown RBP29.98■■■□□ 2.39
TMEM173-209ENST00000511850 TOP2BQ02880 1626 aa29.96■■■□□ 2.39
TMEM173-209ENST00000511850 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
TMEM173-209ENST00000511850 SOGA1O94964 1423 aa29.93■■■□□ 2.38
TMEM173-209ENST00000511850 RAD54L2Q9Y4B4 1467 aa29.89■■■□□ 2.38
TMEM173-209ENST00000511850 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
TMEM173-209ENST00000511850 EIF4G3O43432 1585 aaKnown RBP29.87■■■□□ 2.37
TMEM173-209ENST00000511850 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
TMEM173-209ENST00000511850 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.36
TMEM173-209ENST00000511850 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.351e-8■■■■■ 34.4
TMEM173-209ENST00000511850 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
TMEM173-209ENST00000511850 ABCA5Q8WWZ7 1642 aa29.65■■■□□ 2.34
TMEM173-209ENST00000511850 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
TMEM173-209ENST00000511850 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
TMEM173-209ENST00000511850 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
TMEM173-209ENST00000511850 MAGI1Q96QZ7 1491 aaPredicted RBP29.54■■■□□ 2.32
TMEM173-209ENST00000511850 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
TMEM173-209ENST00000511850 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
TMEM173-209ENST00000511850 CHD1O14646 1710 aa29.47■■■□□ 2.31
TMEM173-209ENST00000511850 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
TMEM173-209ENST00000511850 KIF27Q86VH2 1401 aa29.41■■■□□ 2.3
TMEM173-209ENST00000511850 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
TMEM173-209ENST00000511850 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
TMEM173-209ENST00000511850 SYNJ2O15056 1496 aa29.4■■■□□ 2.3
TMEM173-209ENST00000511850 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
TMEM173-209ENST00000511850 FBLN2P98095 1184 aa29.36■■■□□ 2.29
TMEM173-209ENST00000511850 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
TMEM173-209ENST00000511850 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
TMEM173-209ENST00000511850 CUL7Q14999 1698 aa29.25■■■□□ 2.27
TMEM173-209ENST00000511850 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
TMEM173-209ENST00000511850 IGF1RP08069 1367 aa29.17■■■□□ 2.26
TMEM173-209ENST00000511850 CLASP1Q7Z460 1538 aa29.13■■■□□ 2.25
TMEM173-209ENST00000511850 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
TMEM173-209ENST00000511850 NUP160Q12769 1436 aa29.07■■■□□ 2.24
TMEM173-209ENST00000511850 RUSC2Q8N2Y8 1516 aa29.06■■■□□ 2.24
TMEM173-209ENST00000511850 CARMIL1Q5VZK9 1371 aa29.05■■■□□ 2.24
TMEM173-209ENST00000511850 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
TMEM173-209ENST00000511850 EEA1Q15075 1411 aa29■■■□□ 2.23
TMEM173-209ENST00000511850 ARHGEF11O15085 1522 aa28.98■■■□□ 2.23
TMEM173-209ENST00000511850 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
TMEM173-209ENST00000511850 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
TMEM173-209ENST00000511850 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
TMEM173-209ENST00000511850 RAPGEF2Q9Y4G8 1499 aa28.94■■■□□ 2.22
TMEM173-209ENST00000511850 SHROOM2Q13796 1616 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms