RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-215ENST00000511831 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
YIPF3-215ENST00000511831 ABCC9O60706 1549 aa24.29■■□□□ 1.48
YIPF3-215ENST00000511831 CCDC180Q9P1Z9 1646 aa23.79■■□□□ 1.4
YIPF3-215ENST00000511831 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
YIPF3-215ENST00000511831 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
YIPF3-215ENST00000511831 NACADO15069 1562 aa22.58■■□□□ 1.2
YIPF3-215ENST00000511831 PABPN1Q86U42 306 aaKnown RBP eCLIP22.57■■□□□ 1.2
YIPF3-215ENST00000511831 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
YIPF3-215ENST00000511831 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
YIPF3-215ENST00000511831 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
YIPF3-215ENST00000511831 MYO15BQ96JP2 1530 aa22.09■■□□□ 1.13
YIPF3-215ENST00000511831 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
YIPF3-215ENST00000511831 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
YIPF3-215ENST00000511831 ZCCHC6Q5VYS8 1495 aaKnown RBP21.8■■□□□ 1.08
YIPF3-215ENST00000511831 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
YIPF3-215ENST00000511831 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
YIPF3-215ENST00000511831 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
YIPF3-215ENST00000511831 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
YIPF3-215ENST00000511831 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
YIPF3-215ENST00000511831 CUX2O14529 1486 aa20.98■□□□□ 0.95
YIPF3-215ENST00000511831 ERCC6Q03468 1493 aa20.95■□□□□ 0.94
YIPF3-215ENST00000511831 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
YIPF3-215ENST00000511831 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
YIPF3-215ENST00000511831 NESP48681 1621 aa20.77■□□□□ 0.92
YIPF3-215ENST00000511831 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
YIPF3-215ENST00000511831 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
YIPF3-215ENST00000511831 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
YIPF3-215ENST00000511831 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
YIPF3-215ENST00000511831 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
YIPF3-215ENST00000511831 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
YIPF3-215ENST00000511831 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
YIPF3-215ENST00000511831 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
YIPF3-215ENST00000511831 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
YIPF3-215ENST00000511831 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
YIPF3-215ENST00000511831 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
YIPF3-215ENST00000511831 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
YIPF3-215ENST00000511831 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
YIPF3-215ENST00000511831 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
YIPF3-215ENST00000511831 WDR62O43379 1518 aa20.19■□□□□ 0.82
YIPF3-215ENST00000511831 WIZO95785 1651 aa20.12■□□□□ 0.81
YIPF3-215ENST00000511831 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.81
YIPF3-215ENST00000511831 FANCD2Q9BXW9 1451 aa20.04■□□□□ 0.8
YIPF3-215ENST00000511831 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
YIPF3-215ENST00000511831 CFTRP13569 1480 aa19.92■□□□□ 0.78
YIPF3-215ENST00000511831 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
YIPF3-215ENST00000511831 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
YIPF3-215ENST00000511831 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
YIPF3-215ENST00000511831 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
YIPF3-215ENST00000511831 RSF1Q96T23 1441 aaPredicted RBP19.8■□□□□ 0.76
YIPF3-215ENST00000511831 TOP2AP11388 1531 aaKnown RBP19.8■□□□□ 0.76
YIPF3-215ENST00000511831 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
YIPF3-215ENST00000511831 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
YIPF3-215ENST00000511831 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
YIPF3-215ENST00000511831 PRDM2Q13029 1718 aa19.66■□□□□ 0.74
YIPF3-215ENST00000511831 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
YIPF3-215ENST00000511831 CCDC88BA6NC98 1476 aa19.6■□□□□ 0.73
YIPF3-215ENST00000511831 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
YIPF3-215ENST00000511831 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
YIPF3-215ENST00000511831 CHD1O14646 1710 aa19.52■□□□□ 0.72
YIPF3-215ENST00000511831 AQRO60306 1485 aaKnown RBP eCLIP19.52■□□□□ 0.721e-8■■■□□ 17.3
YIPF3-215ENST00000511831 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
YIPF3-215ENST00000511831 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
YIPF3-215ENST00000511831 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
YIPF3-215ENST00000511831 FBLN2P98095 1184 aa19.47■□□□□ 0.71
YIPF3-215ENST00000511831 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
YIPF3-215ENST00000511831 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
YIPF3-215ENST00000511831 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
YIPF3-215ENST00000511831 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
YIPF3-215ENST00000511831 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
YIPF3-215ENST00000511831 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
YIPF3-215ENST00000511831 SOGA1O94964 1423 aa19.29■□□□□ 0.68
YIPF3-215ENST00000511831 CLASP1Q7Z460 1538 aa19.27■□□□□ 0.68
YIPF3-215ENST00000511831 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
YIPF3-215ENST00000511831 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
YIPF3-215ENST00000511831 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
YIPF3-215ENST00000511831 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
YIPF3-215ENST00000511831 CUX1P39880 1505 aa19.17■□□□□ 0.66
YIPF3-215ENST00000511831 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
YIPF3-215ENST00000511831 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
YIPF3-215ENST00000511831 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
YIPF3-215ENST00000511831 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
YIPF3-215ENST00000511831 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
YIPF3-215ENST00000511831 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
YIPF3-215ENST00000511831 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.64
YIPF3-215ENST00000511831 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
YIPF3-215ENST00000511831 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
YIPF3-215ENST00000511831 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
YIPF3-215ENST00000511831 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
YIPF3-215ENST00000511831 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
YIPF3-215ENST00000511831 NUP160Q12769 1436 aa18.86■□□□□ 0.61
YIPF3-215ENST00000511831 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
YIPF3-215ENST00000511831 WRNQ14191 1432 aaPredicted RBP eCLIP18.8■□□□□ 0.6
YIPF3-215ENST00000511831 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.6
YIPF3-215ENST00000511831 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
YIPF3-215ENST00000511831 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
YIPF3-215ENST00000511831 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
YIPF3-215ENST00000511831 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.59
YIPF3-215ENST00000511831 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
YIPF3-215ENST00000511831 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
YIPF3-215ENST00000511831 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms