RNA–Protein interactions for RNA: ENST00000511661.2

LINC01948-202, Transcript of long intergenic non-protein coding RNA 1948, humanhuman

TSL 4

Gene LINC01948, Length 578 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01948-202ENST00000511661 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
LINC01948-202ENST00000511661 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
LINC01948-202ENST00000511661 ABCC9O60706 1549 aa20.5■□□□□ 0.87
LINC01948-202ENST00000511661 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
LINC01948-202ENST00000511661 NACADO15069 1562 aa19.61■□□□□ 0.73
LINC01948-202ENST00000511661 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
LINC01948-202ENST00000511661 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
LINC01948-202ENST00000511661 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
LINC01948-202ENST00000511661 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
LINC01948-202ENST00000511661 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
LINC01948-202ENST00000511661 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.65
LINC01948-202ENST00000511661 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
LINC01948-202ENST00000511661 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
LINC01948-202ENST00000511661 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
LINC01948-202ENST00000511661 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
LINC01948-202ENST00000511661 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
LINC01948-202ENST00000511661 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
LINC01948-202ENST00000511661 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
LINC01948-202ENST00000511661 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
LINC01948-202ENST00000511661 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
LINC01948-202ENST00000511661 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
LINC01948-202ENST00000511661 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
LINC01948-202ENST00000511661 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
LINC01948-202ENST00000511661 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
LINC01948-202ENST00000511661 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
LINC01948-202ENST00000511661 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
LINC01948-202ENST00000511661 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
LINC01948-202ENST00000511661 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
LINC01948-202ENST00000511661 WIZO95785 1651 aa17.71■□□□□ 0.42
LINC01948-202ENST00000511661 NESP48681 1621 aa17.67■□□□□ 0.42
LINC01948-202ENST00000511661 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
LINC01948-202ENST00000511661 CUX2O14529 1486 aa17.63■□□□□ 0.41
LINC01948-202ENST00000511661 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
LINC01948-202ENST00000511661 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
LINC01948-202ENST00000511661 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
LINC01948-202ENST00000511661 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.39
LINC01948-202ENST00000511661 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
LINC01948-202ENST00000511661 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
LINC01948-202ENST00000511661 CFTRP13569 1480 aa17.37■□□□□ 0.37
LINC01948-202ENST00000511661 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
LINC01948-202ENST00000511661 PRDM2Q13029 1718 aa17.33■□□□□ 0.37
LINC01948-202ENST00000511661 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
LINC01948-202ENST00000511661 WDR62O43379 1518 aa17.32■□□□□ 0.36
LINC01948-202ENST00000511661 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
LINC01948-202ENST00000511661 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
LINC01948-202ENST00000511661 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
LINC01948-202ENST00000511661 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
LINC01948-202ENST00000511661 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
LINC01948-202ENST00000511661 TOPBP1Q92547 1522 aa17.02■□□□□ 0.32
LINC01948-202ENST00000511661 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
LINC01948-202ENST00000511661 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
LINC01948-202ENST00000511661 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
LINC01948-202ENST00000511661 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
LINC01948-202ENST00000511661 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
LINC01948-202ENST00000511661 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
LINC01948-202ENST00000511661 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
LINC01948-202ENST00000511661 CUX1P39880 1505 aa16.8■□□□□ 0.28
LINC01948-202ENST00000511661 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
LINC01948-202ENST00000511661 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
LINC01948-202ENST00000511661 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
LINC01948-202ENST00000511661 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01948-202ENST00000511661 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
LINC01948-202ENST00000511661 SOGA1O94964 1423 aa16.76■□□□□ 0.27
LINC01948-202ENST00000511661 CHD1O14646 1710 aa16.72■□□□□ 0.27
LINC01948-202ENST00000511661 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
LINC01948-202ENST00000511661 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
LINC01948-202ENST00000511661 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
LINC01948-202ENST00000511661 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
LINC01948-202ENST00000511661 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
LINC01948-202ENST00000511661 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
LINC01948-202ENST00000511661 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
LINC01948-202ENST00000511661 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
LINC01948-202ENST00000511661 RIMBP3CA6NJZ7 1639 aa16.62■□□□□ 0.25
LINC01948-202ENST00000511661 RIMBP3BA6NNM3 1639 aa16.62■□□□□ 0.25
LINC01948-202ENST00000511661 RIMBP3Q9UFD9 1639 aa16.62■□□□□ 0.25
LINC01948-202ENST00000511661 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
LINC01948-202ENST00000511661 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
LINC01948-202ENST00000511661 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
LINC01948-202ENST00000511661 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
LINC01948-202ENST00000511661 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
LINC01948-202ENST00000511661 FBLN2P98095 1184 aa16.58■□□□□ 0.24
LINC01948-202ENST00000511661 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
LINC01948-202ENST00000511661 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
LINC01948-202ENST00000511661 CHMP7Q8WUX9 453 aaPredicted RBP16.51■□□□□ 0.23
LINC01948-202ENST00000511661 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
LINC01948-202ENST00000511661 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
LINC01948-202ENST00000511661 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
LINC01948-202ENST00000511661 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
LINC01948-202ENST00000511661 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
LINC01948-202ENST00000511661 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
LINC01948-202ENST00000511661 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
LINC01948-202ENST00000511661 NUP160Q12769 1436 aa16.35■□□□□ 0.21
LINC01948-202ENST00000511661 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
LINC01948-202ENST00000511661 SHROOM2Q13796 1616 aa16.29■□□□□ 0.2
LINC01948-202ENST00000511661 KIF27Q86VH2 1401 aa16.28■□□□□ 0.2
LINC01948-202ENST00000511661 CUL7Q14999 1698 aa16.27■□□□□ 0.2
LINC01948-202ENST00000511661 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
LINC01948-202ENST00000511661 ERCC6L2Q5T890 1561 aa16.22■□□□□ 0.19
LINC01948-202ENST00000511661 IGF1RP08069 1367 aa16.21■□□□□ 0.19
LINC01948-202ENST00000511661 PRG4Q92954 1404 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms