RNA–Protein interactions for RNA: ENST00000511572.5

APBB2-222, Transcript of amyloid beta precursor protein binding family B member 2, human

TSL 4

Gene APBB2, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB2-222	ENST00000511572	NISCH	Q9Y2I1	1504 aa		44.74	■■■■■ 4.75
APBB2-222	ENST00000511572	CCDC180	Q9P1Z9	1646 aa		39.89	■■■■□ 3.98
APBB2-222	ENST00000511572	ABCC9	O60706	1549 aa		39.13	■■■■□ 3.85
APBB2-222	ENST00000511572	RB1CC1	Q8TDY2	1594 aa		37.6	■■■■□ 3.61
APBB2-222	ENST00000511572	NACAD	O15069	1562 aa		37.53	■■■■□ 3.6
APBB2-222	ENST00000511572	MYO15B	Q96JP2	1530 aa		37.3	■■■■□ 3.56
APBB2-222	ENST00000511572	DCAF8L2	P0C7V8	631 aa		37.27	■■■■□ 3.56
APBB2-222	ENST00000511572	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.26	■■■■□ 3.56
APBB2-222	ENST00000511572	DCAF1	Q9Y4B6	1507 aa		37.06	■■■■□ 3.52
APBB2-222	ENST00000511572	UNC13A	Q9UPW8	1703 aa		36.76	■■■■□ 3.47
APBB2-222	ENST00000511572	BICRA	Q9NZM4	1560 aa		36.49	■■■■□ 3.43
APBB2-222	ENST00000511572	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.48	■■■■□ 3.43
APBB2-222	ENST00000511572	SCRIB	Q14160	1630 aa		36.33	■■■■□ 3.41
APBB2-222	ENST00000511572	SHROOM4	Q9ULL8	1493 aa		36.15	■■■■□ 3.38
APBB2-222	ENST00000511572	DNAJC5B	Q9UF47	199 aa		36.07	■■■■□ 3.36
APBB2-222	ENST00000511572	EIF4G1	Q04637	1599 aa	Known RBP	35.55	■■■■□ 3.28
APBB2-222	ENST00000511572	CC2D2A	Q9P2K1	1620 aa		35.42	■■■■□ 3.26
APBB2-222	ENST00000511572	CECR2	Q9BXF3	1484 aa		35.21	■■■■□ 3.23
APBB2-222	ENST00000511572	SMARCA4	P51532	1647 aa		34.76	■■■■□ 3.15
APBB2-222	ENST00000511572	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.69	■■■■□ 3.14
APBB2-222	ENST00000511572	NCAPD3	P42695	1498 aa		34.63	■■■■□ 3.13
APBB2-222	ENST00000511572	ATAD2B	Q9ULI0	1458 aa		34.62	■■■■□ 3.13
APBB2-222	ENST00000511572	SMARCA2	P51531	1590 aa		34.57	■■■■□ 3.12
APBB2-222	ENST00000511572	HMGXB3	Q12766	1538 aa		34.47	■■■■□ 3.11
APBB2-222	ENST00000511572	PEG3	Q9GZU2	1588 aa		34.47	■■■■□ 3.11
APBB2-222	ENST00000511572	MROH2B	Q7Z745	1585 aa		34.45	■■■■□ 3.11
APBB2-222	ENST00000511572	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.3	■■■■□ 3.08
APBB2-222	ENST00000511572	WIZ	O95785	1651 aa		34.06	■■■■□ 3.04
APBB2-222	ENST00000511572	RSF1	Q96T23	1441 aa	Predicted RBP	33.99	■■■■□ 3.03
APBB2-222	ENST00000511572	NES	P48681	1621 aa		33.82	■■■■□ 3
APBB2-222	ENST00000511572	LAMC3	Q9Y6N6	1575 aa		33.76	■■■□□ 2.99
APBB2-222	ENST00000511572	ERCC6	Q03468	1493 aa		33.74	■■■□□ 2.99
APBB2-222	ENST00000511572	TOP2A	P11388	1531 aa	Known RBP	33.74	■■■□□ 2.99
APBB2-222	ENST00000511572	CADPS	Q9ULU8	1353 aa		33.59	■■■□□ 2.97
APBB2-222	ENST00000511572	CUX2	O14529	1486 aa		33.51	■■■□□ 2.96
APBB2-222	ENST00000511572	PDS5B	Q9NTI5	1447 aa		33.5	■■■□□ 2.95
APBB2-222	ENST00000511572	KIF21A	Q7Z4S6	1674 aa		33.43	■■■□□ 2.94
APBB2-222	ENST00000511572	THOC2	Q8NI27	1593 aa	Known RBP	33.42	■■■□□ 2.94
APBB2-222	ENST00000511572	CFTR	P13569	1480 aa		33.37	■■■□□ 2.93
APBB2-222	ENST00000511572	CCDC88B	A6NC98	1476 aa		33.3	■■■□□ 2.92
APBB2-222	ENST00000511572	FANCD2	Q9BXW9	1451 aa		33.2	■■■□□ 2.91
APBB2-222	ENST00000511572	MRC2	Q9UBG0	1479 aa		33.18	■■■□□ 2.9
APBB2-222	ENST00000511572	CEP164	Q9UPV0	1460 aa		33.18	■■■□□ 2.9
APBB2-222	ENST00000511572	PRDM2	Q13029	1718 aa		33.12	■■■□□ 2.89
APBB2-222	ENST00000511572	WDR62	O43379	1518 aa		33.12	■■■□□ 2.89
APBB2-222	ENST00000511572	URB2	Q14146	1524 aa	Known RBP	32.89	■■■□□ 2.86
APBB2-222	ENST00000511572	SUPT5H	O00267	1087 aa	Known RBP	32.85	■■■□□ 2.85
APBB2-222	ENST00000511572	TOPBP1	Q92547	1522 aa		32.67	■■■□□ 2.82
APBB2-222	ENST00000511572	ABCC8	Q09428	1581 aa		32.65	■■■□□ 2.82
APBB2-222	ENST00000511572	DNAJC5	Q9H3Z4	198 aa		32.64	■■■□□ 2.82
APBB2-222	ENST00000511572	DNMBP	Q6XZF7	1577 aa		32.62	■■■□□ 2.81
APBB2-222	ENST00000511572	IFT140	Q96RY7	1462 aa		32.51	■■■□□ 2.79
APBB2-222	ENST00000511572	POLA1	P09884	1462 aa	Predicted RBP	32.38	■■■□□ 2.77
APBB2-222	ENST00000511572	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.36	■■■□□ 2.77
APBB2-222	ENST00000511572	CUX1	P39880	1505 aa		32.35	■■■□□ 2.77
APBB2-222	ENST00000511572	TARBP1	Q13395	1621 aa	Known RBP	32.33	■■■□□ 2.77
APBB2-222	ENST00000511572	EIF4G3	O43432	1585 aa	Known RBP	32.25	■■■□□ 2.75
APBB2-222	ENST00000511572	FGD5	Q6ZNL6	1462 aa		32.25	■■■□□ 2.75
APBB2-222	ENST00000511572	RAD54L2	Q9Y4B4	1467 aa		32.2	■■■□□ 2.75
APBB2-222	ENST00000511572	SOGA1	O94964	1423 aa		32.19	■■■□□ 2.74
APBB2-222	ENST00000511572	AQR	O60306	1485 aa	Known RBP eCLIP	32.12	■■■□□ 2.73
APBB2-222	ENST00000511572	WDR97	A6NE52	1622 aa		32.11	■■■□□ 2.73
APBB2-222	ENST00000511572	WRN	Q14191	1432 aa	Predicted RBP eCLIP	32.05	■■■□□ 2.72
APBB2-222	ENST00000511572	BIVM-ERCC5	R4GMW8	1640 aa		32.04	■■■□□ 2.72
APBB2-222	ENST00000511572	TOP2B	Q02880	1626 aa		32.03	■■■□□ 2.72
APBB2-222	ENST00000511572	TDRD9	Q8NDG6	1382 aa	Known RBP	32.02	■■■□□ 2.72
APBB2-222	ENST00000511572	SYNJ1	O43426	1573 aa		32	■■■□□ 2.71
APBB2-222	ENST00000511572	OSCAR	Q8IYS5	282 aa		32	■■■□□ 2.71
APBB2-222	ENST00000511572	ABCA10	Q8WWZ4	1543 aa		31.96	■■■□□ 2.71
APBB2-222	ENST00000511572	GRIN2B	Q13224	1484 aa		31.87	■■■□□ 2.69
APBB2-222	ENST00000511572	ABCA5	Q8WWZ7	1642 aa		31.86	■■■□□ 2.69
APBB2-222	ENST00000511572	SNAPC4	Q5SXM2	1469 aa		31.86	■■■□□ 2.69
APBB2-222	ENST00000511572	CHD1	O14646	1710 aa		31.86	■■■□□ 2.69
APBB2-222	ENST00000511572	GAPVD1	Q14C86	1478 aa		31.84	■■■□□ 2.69
APBB2-222	ENST00000511572	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.83	■■■□□ 2.69
APBB2-222	ENST00000511572	PBRM1	Q86U86	1689 aa		31.81	■■■□□ 2.68
APBB2-222	ENST00000511572	SYNJ2	O15056	1496 aa		31.7	■■■□□ 2.66
APBB2-222	ENST00000511572	FBLN2	P98095	1184 aa		31.69	■■■□□ 2.66
APBB2-222	ENST00000511572	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.62	■■■□□ 2.65
APBB2-222	ENST00000511572	ERICH3	Q5RHP9	1530 aa		31.58	■■■□□ 2.65
APBB2-222	ENST00000511572	RIMBP3C	A6NJZ7	1639 aa		31.57	■■■□□ 2.64
APBB2-222	ENST00000511572	RIMBP3B	A6NNM3	1639 aa		31.57	■■■□□ 2.64
APBB2-222	ENST00000511572	RIMBP3	Q9UFD9	1639 aa		31.57	■■■□□ 2.64
APBB2-222	ENST00000511572	ADAMTS12	P58397	1594 aa		31.57	■■■□□ 2.64
APBB2-222	ENST00000511572	CLASP1	Q7Z460	1538 aa		31.56	■■■□□ 2.64
APBB2-222	ENST00000511572	ARHGEF11	O15085	1522 aa		31.55	■■■□□ 2.64
APBB2-222	ENST00000511572	FHAD1	B1AJZ9	1412 aa		31.48	■■■□□ 2.63
APBB2-222	ENST00000511572	GRIN2A	Q12879	1464 aa		31.47	■■■□□ 2.63
APBB2-222	ENST00000511572	TRIM41	Q8WV44	630 aa		31.42	■■■□□ 2.62
APBB2-222	ENST00000511572	KIF27	Q86VH2	1401 aa		31.39	■■■□□ 2.62
APBB2-222	ENST00000511572	NUP160	Q12769	1436 aa		31.37	■■■□□ 2.61
APBB2-222	ENST00000511572	CEP170	Q5SW79	1584 aa		31.33	■■■□□ 2.61
APBB2-222	ENST00000511572	ARAP1	Q96P48	1450 aa		31.3	■■■□□ 2.6
APBB2-222	ENST00000511572	IGF1R	P08069	1367 aa		31.29	■■■□□ 2.6
APBB2-222	ENST00000511572	CUL7	Q14999	1698 aa		31.25	■■■□□ 2.59
APBB2-222	ENST00000511572	CYB5RL	Q6IPT4	315 aa		31.18	■■■□□ 2.58
APBB2-222	ENST00000511572	SHROOM2	Q13796	1616 aa		31.16	■■■□□ 2.58
APBB2-222	ENST00000511572	RUSC2	Q8N2Y8	1516 aa		31.12	■■■□□ 2.57
APBB2-222	ENST00000511572	CARMIL1	Q5VZK9	1371 aa		31.08	■■■□□ 2.57
APBB2-222	ENST00000511572	ERCC6L2	Q5T890	1561 aa		31.06	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms