RNA–Protein interactions for RNA: ENST00000511456.3

RAD1-205, Transcript of RAD1 checkpoint DNA exonuclease, humanhuman

TSL 3

Gene RAD1, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1-205ENST00000511456 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
RAD1-205ENST00000511456 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
RAD1-205ENST00000511456 ABCC9O60706 1549 aa26.06■■□□□ 1.76
RAD1-205ENST00000511456 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
RAD1-205ENST00000511456 NACADO15069 1562 aa24.58■■□□□ 1.52
RAD1-205ENST00000511456 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
RAD1-205ENST00000511456 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
RAD1-205ENST00000511456 UNC13AQ9UPW8 1703 aa24.37■■□□□ 1.49
RAD1-205ENST00000511456 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
RAD1-205ENST00000511456 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
RAD1-205ENST00000511456 BICRAQ9NZM4 1560 aa24.15■■□□□ 1.46
RAD1-205ENST00000511456 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
RAD1-205ENST00000511456 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
RAD1-205ENST00000511456 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
RAD1-205ENST00000511456 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
RAD1-205ENST00000511456 CC2D2AQ9P2K1 1620 aa23.55■■□□□ 1.36
RAD1-205ENST00000511456 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
RAD1-205ENST00000511456 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
RAD1-205ENST00000511456 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
RAD1-205ENST00000511456 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
RAD1-205ENST00000511456 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
RAD1-205ENST00000511456 SMARCA2P51531 1590 aa22.57■■□□□ 1.2
RAD1-205ENST00000511456 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
RAD1-205ENST00000511456 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
RAD1-205ENST00000511456 NESP48681 1621 aa22.44■■□□□ 1.18
RAD1-205ENST00000511456 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
RAD1-205ENST00000511456 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
RAD1-205ENST00000511456 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
RAD1-205ENST00000511456 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
RAD1-205ENST00000511456 CUX2O14529 1486 aa22.35■■□□□ 1.17
RAD1-205ENST00000511456 DNAJC5Q9H3Z4 198 aa22.26■■□□□ 1.15
RAD1-205ENST00000511456 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
RAD1-205ENST00000511456 WIZO95785 1651 aa22.2■■□□□ 1.15
RAD1-205ENST00000511456 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
RAD1-205ENST00000511456 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
RAD1-205ENST00000511456 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
RAD1-205ENST00000511456 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
RAD1-205ENST00000511456 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
RAD1-205ENST00000511456 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
RAD1-205ENST00000511456 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
RAD1-205ENST00000511456 WDR62O43379 1518 aa21.86■■□□□ 1.09
RAD1-205ENST00000511456 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
RAD1-205ENST00000511456 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
RAD1-205ENST00000511456 CFTRP13569 1480 aa21.77■■□□□ 1.08
RAD1-205ENST00000511456 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
RAD1-205ENST00000511456 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
RAD1-205ENST00000511456 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
RAD1-205ENST00000511456 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
RAD1-205ENST00000511456 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
RAD1-205ENST00000511456 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
RAD1-205ENST00000511456 IFT140Q96RY7 1462 aa21.32■■□□□ 1
RAD1-205ENST00000511456 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
RAD1-205ENST00000511456 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
RAD1-205ENST00000511456 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
RAD1-205ENST00000511456 TARBP1Q13395 1621 aaKnown RBP21.25■□□□□ 0.99
RAD1-205ENST00000511456 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
RAD1-205ENST00000511456 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
RAD1-205ENST00000511456 CHD1O14646 1710 aa21.16■□□□□ 0.98
RAD1-205ENST00000511456 RIMBP3CA6NJZ7 1639 aa21.16■□□□□ 0.98
RAD1-205ENST00000511456 RIMBP3BA6NNM3 1639 aa21.16■□□□□ 0.98
RAD1-205ENST00000511456 RIMBP3Q9UFD9 1639 aa21.16■□□□□ 0.98
RAD1-205ENST00000511456 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.981e-7■■■■■ 39.8
RAD1-205ENST00000511456 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
RAD1-205ENST00000511456 CUX1P39880 1505 aa21.09■□□□□ 0.97
RAD1-205ENST00000511456 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
RAD1-205ENST00000511456 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
RAD1-205ENST00000511456 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
RAD1-205ENST00000511456 SOGA1O94964 1423 aa21.01■□□□□ 0.95
RAD1-205ENST00000511456 WDR97A6NE52 1622 aa21■□□□□ 0.95
RAD1-205ENST00000511456 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
RAD1-205ENST00000511456 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
RAD1-205ENST00000511456 FBLN2P98095 1184 aa20.92■□□□□ 0.94
RAD1-205ENST00000511456 PBRM1Q86U86 1689 aa20.89■□□□□ 0.94
RAD1-205ENST00000511456 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
RAD1-205ENST00000511456 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
RAD1-205ENST00000511456 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
RAD1-205ENST00000511456 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
RAD1-205ENST00000511456 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
RAD1-205ENST00000511456 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
RAD1-205ENST00000511456 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
RAD1-205ENST00000511456 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
RAD1-205ENST00000511456 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
RAD1-205ENST00000511456 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
RAD1-205ENST00000511456 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
RAD1-205ENST00000511456 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
RAD1-205ENST00000511456 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
RAD1-205ENST00000511456 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
RAD1-205ENST00000511456 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
RAD1-205ENST00000511456 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
RAD1-205ENST00000511456 CEP170Q5SW79 1584 aa20.61■□□□□ 0.89
RAD1-205ENST00000511456 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
RAD1-205ENST00000511456 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
RAD1-205ENST00000511456 NUP160Q12769 1436 aa20.54■□□□□ 0.88
RAD1-205ENST00000511456 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
RAD1-205ENST00000511456 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
RAD1-205ENST00000511456 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
RAD1-205ENST00000511456 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
RAD1-205ENST00000511456 PRG4Q92954 1404 aaPredicted RBP20.31■□□□□ 0.84
RAD1-205ENST00000511456 CUL7Q14999 1698 aa20.26■□□□□ 0.83
RAD1-205ENST00000511456 KIF13AQ9H1H9 1805 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms