RNA–Protein interactions for RNA: ENST00000511396.1

APOBEC3AP1-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A pseudogene 1, humanhuman

BASIC

Gene APOBEC3AP1, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3AP1-201ENST00000511396 NISCHQ9Y2I1 1504 aa16.72■□□□□ 0.27
APOBEC3AP1-201ENST00000511396 ABCC9O60706 1549 aa15.89■□□□□ 0.13
APOBEC3AP1-201ENST00000511396 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
APOBEC3AP1-201ENST00000511396 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
APOBEC3AP1-201ENST00000511396 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
APOBEC3AP1-201ENST00000511396 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.05
APOBEC3AP1-201ENST00000511396 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
APOBEC3AP1-201ENST00000511396 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
APOBEC3AP1-201ENST00000511396 NACADO15069 1562 aa14.43□□□□□ -0.1
APOBEC3AP1-201ENST00000511396 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
APOBEC3AP1-201ENST00000511396 DNAJC5Q9H3Z4 198 aa14.36□□□□□ -0.11
APOBEC3AP1-201ENST00000511396 CECR2Q9BXF3 1484 aa14.28□□□□□ -0.12
APOBEC3AP1-201ENST00000511396 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
APOBEC3AP1-201ENST00000511396 EIF4G1Q04637 1599 aaKnown RBP14.04□□□□□ -0.16
APOBEC3AP1-201ENST00000511396 SCRIBQ14160 1630 aa14□□□□□ -0.17
APOBEC3AP1-201ENST00000511396 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
APOBEC3AP1-201ENST00000511396 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
APOBEC3AP1-201ENST00000511396 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
APOBEC3AP1-201ENST00000511396 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
APOBEC3AP1-201ENST00000511396 CUX2O14529 1486 aa13.69□□□□□ -0.22
APOBEC3AP1-201ENST00000511396 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
APOBEC3AP1-201ENST00000511396 DCAF1Q9Y4B6 1507 aa13.61□□□□□ -0.23
APOBEC3AP1-201ENST00000511396 NESP48681 1621 aa13.53□□□□□ -0.24
APOBEC3AP1-201ENST00000511396 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
APOBEC3AP1-201ENST00000511396 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
APOBEC3AP1-201ENST00000511396 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
APOBEC3AP1-201ENST00000511396 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
APOBEC3AP1-201ENST00000511396 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
APOBEC3AP1-201ENST00000511396 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
APOBEC3AP1-201ENST00000511396 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
APOBEC3AP1-201ENST00000511396 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
APOBEC3AP1-201ENST00000511396 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
APOBEC3AP1-201ENST00000511396 LAMC3Q9Y6N6 1575 aa13.12□□□□□ -0.31
APOBEC3AP1-201ENST00000511396 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
APOBEC3AP1-201ENST00000511396 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
APOBEC3AP1-201ENST00000511396 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
APOBEC3AP1-201ENST00000511396 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.32
APOBEC3AP1-201ENST00000511396 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.32
APOBEC3AP1-201ENST00000511396 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.32
APOBEC3AP1-201ENST00000511396 WDR62O43379 1518 aa13.01□□□□□ -0.33
APOBEC3AP1-201ENST00000511396 TRHP20396 242 aaPredicted RBP12.98□□□□□ -0.33
APOBEC3AP1-201ENST00000511396 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
APOBEC3AP1-201ENST00000511396 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
APOBEC3AP1-201ENST00000511396 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
APOBEC3AP1-201ENST00000511396 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
APOBEC3AP1-201ENST00000511396 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
APOBEC3AP1-201ENST00000511396 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
APOBEC3AP1-201ENST00000511396 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
APOBEC3AP1-201ENST00000511396 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
APOBEC3AP1-201ENST00000511396 WIZO95785 1651 aa12.84□□□□□ -0.35
APOBEC3AP1-201ENST00000511396 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.35
APOBEC3AP1-201ENST00000511396 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
APOBEC3AP1-201ENST00000511396 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
APOBEC3AP1-201ENST00000511396 FBLN2P98095 1184 aa12.73□□□□□ -0.37
APOBEC3AP1-201ENST00000511396 CHD1O14646 1710 aa12.71□□□□□ -0.38
APOBEC3AP1-201ENST00000511396 CFTRP13569 1480 aa12.68□□□□□ -0.38
APOBEC3AP1-201ENST00000511396 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
APOBEC3AP1-201ENST00000511396 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
APOBEC3AP1-201ENST00000511396 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
APOBEC3AP1-201ENST00000511396 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
APOBEC3AP1-201ENST00000511396 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
APOBEC3AP1-201ENST00000511396 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
APOBEC3AP1-201ENST00000511396 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
APOBEC3AP1-201ENST00000511396 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3AP1-201ENST00000511396 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
APOBEC3AP1-201ENST00000511396 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
APOBEC3AP1-201ENST00000511396 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
APOBEC3AP1-201ENST00000511396 SNAPC4Q5SXM2 1469 aa12.45□□□□□ -0.42
APOBEC3AP1-201ENST00000511396 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
APOBEC3AP1-201ENST00000511396 CLASP1Q7Z460 1538 aa12.44□□□□□ -0.42
APOBEC3AP1-201ENST00000511396 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
APOBEC3AP1-201ENST00000511396 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3AP1-201ENST00000511396 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3AP1-201ENST00000511396 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
APOBEC3AP1-201ENST00000511396 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
APOBEC3AP1-201ENST00000511396 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
APOBEC3AP1-201ENST00000511396 SOGA1O94964 1423 aa12.36□□□□□ -0.43
APOBEC3AP1-201ENST00000511396 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
APOBEC3AP1-201ENST00000511396 FGD5Q6ZNL6 1462 aa12.29□□□□□ -0.44
APOBEC3AP1-201ENST00000511396 KIF13AQ9H1H9 1805 aa12.29□□□□□ -0.44
APOBEC3AP1-201ENST00000511396 KDM4FA0A1W2PPD8 638 aa12.28□□□□□ -0.44
APOBEC3AP1-201ENST00000511396 SYNJ2O15056 1496 aa12.27□□□□□ -0.45
APOBEC3AP1-201ENST00000511396 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
APOBEC3AP1-201ENST00000511396 MAGI1Q96QZ7 1491 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3AP1-201ENST00000511396 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
APOBEC3AP1-201ENST00000511396 CUX1P39880 1505 aa12.21□□□□□ -0.46
APOBEC3AP1-201ENST00000511396 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
APOBEC3AP1-201ENST00000511396 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
APOBEC3AP1-201ENST00000511396 TSPOAP1O95153 1857 aa12.18□□□□□ -0.46
APOBEC3AP1-201ENST00000511396 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
APOBEC3AP1-201ENST00000511396 KDM6BO15054 1643 aa12.12□□□□□ -0.47
APOBEC3AP1-201ENST00000511396 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
APOBEC3AP1-201ENST00000511396 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
APOBEC3AP1-201ENST00000511396 PRG4Q92954 1404 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3AP1-201ENST00000511396 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
APOBEC3AP1-201ENST00000511396 TTBK1Q5TCY1 1321 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3AP1-201ENST00000511396 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
APOBEC3AP1-201ENST00000511396 DIP2BQ9P265 1576 aa12.06□□□□□ -0.48
APOBEC3AP1-201ENST00000511396 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
APOBEC3AP1-201ENST00000511396 NUP160Q12769 1436 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms