RNA–Protein interactions for RNA: ENST00000511344.1

CSF1R-205, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 4

Gene CSF1R, Length 655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-205ENST00000511344 NISCHQ9Y2I1 1504 aa43.84■■■■■ 4.61
CSF1R-205ENST00000511344 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
CSF1R-205ENST00000511344 ABCC9O60706 1549 aa37.96■■■■□ 3.67
CSF1R-205ENST00000511344 ZCCHC6Q5VYS8 1495 aaKnown RBP36.57■■■■□ 3.45
CSF1R-205ENST00000511344 RB1CC1Q8TDY2 1594 aa36.56■■■■□ 3.44
CSF1R-205ENST00000511344 NACADO15069 1562 aa36.54■■■■□ 3.44
CSF1R-205ENST00000511344 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
CSF1R-205ENST00000511344 MYO15BQ96JP2 1530 aa36.37■■■■□ 3.41
CSF1R-205ENST00000511344 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
CSF1R-205ENST00000511344 UNC13AQ9UPW8 1703 aa35.79■■■■□ 3.32
CSF1R-205ENST00000511344 SCRIBQ14160 1630 aa35.56■■■■□ 3.28
CSF1R-205ENST00000511344 BICRAQ9NZM4 1560 aa35.48■■■■□ 3.27
CSF1R-205ENST00000511344 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
CSF1R-205ENST00000511344 SHROOM4Q9ULL8 1493 aa35.08■■■■□ 3.21
CSF1R-205ENST00000511344 DNAJC5BQ9UF47 199 aa34.68■■■■□ 3.14
CSF1R-205ENST00000511344 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
CSF1R-205ENST00000511344 CC2D2AQ9P2K1 1620 aa34.34■■■■□ 3.09
CSF1R-205ENST00000511344 CECR2Q9BXF3 1484 aa34.15■■■■□ 3.06
CSF1R-205ENST00000511344 SMARCA4P51532 1647 aa34.01■■■■□ 3.04
CSF1R-205ENST00000511344 BAZ1AQ9NRL2 1556 aaPredicted RBP33.97■■■■□ 3.03
CSF1R-205ENST00000511344 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
CSF1R-205ENST00000511344 ATAD2BQ9ULI0 1458 aa33.77■■■■□ 3
CSF1R-205ENST00000511344 SMARCA2P51531 1590 aa33.72■■■□□ 2.99
CSF1R-205ENST00000511344 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
CSF1R-205ENST00000511344 PEG3Q9GZU2 1588 aa33.67■■■□□ 2.98
CSF1R-205ENST00000511344 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
CSF1R-205ENST00000511344 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
CSF1R-205ENST00000511344 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
CSF1R-205ENST00000511344 WIZO95785 1651 aa33.46■■■□□ 2.95
CSF1R-205ENST00000511344 TOP2AP11388 1531 aaKnown RBP33.11■■■□□ 2.89
CSF1R-205ENST00000511344 NESP48681 1621 aa32.9■■■□□ 2.86
CSF1R-205ENST00000511344 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.84
CSF1R-205ENST00000511344 CADPSQ9ULU8 1353 aa32.72■■■□□ 2.83
CSF1R-205ENST00000511344 CCDC88BA6NC98 1476 aa32.7■■■□□ 2.83
CSF1R-205ENST00000511344 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
CSF1R-205ENST00000511344 SUPT5HO00267 1087 aaKnown RBP32.68■■■□□ 2.82
CSF1R-205ENST00000511344 CFTRP13569 1480 aa32.59■■■□□ 2.81
CSF1R-205ENST00000511344 PDS5BQ9NTI5 1447 aa32.56■■■□□ 2.8
CSF1R-205ENST00000511344 KIF21AQ7Z4S6 1674 aa32.53■■■□□ 2.8
CSF1R-205ENST00000511344 THOC2Q8NI27 1593 aaKnown RBP32.39■■■□□ 2.78
CSF1R-205ENST00000511344 PRDM2Q13029 1718 aa32.39■■■□□ 2.78
CSF1R-205ENST00000511344 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
CSF1R-205ENST00000511344 CEP164Q9UPV0 1460 aa32.33■■■□□ 2.77
CSF1R-205ENST00000511344 CUX2O14529 1486 aa32.29■■■□□ 2.76
CSF1R-205ENST00000511344 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.75
CSF1R-205ENST00000511344 WDR62O43379 1518 aa32.16■■■□□ 2.74
CSF1R-205ENST00000511344 URB2Q14146 1524 aaKnown RBP32.06■■■□□ 2.72
CSF1R-205ENST00000511344 TOPBP1Q92547 1522 aa31.89■■■□□ 2.7
CSF1R-205ENST00000511344 DNMBPQ6XZF7 1577 aa31.87■■■□□ 2.69
CSF1R-205ENST00000511344 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
CSF1R-205ENST00000511344 CUX1P39880 1505 aa31.71■■■□□ 2.67
CSF1R-205ENST00000511344 IFT140Q96RY7 1462 aa31.64■■■□□ 2.66
CSF1R-205ENST00000511344 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
CSF1R-205ENST00000511344 FGD5Q6ZNL6 1462 aa31.58■■■□□ 2.65
CSF1R-205ENST00000511344 TARBP1Q13395 1621 aaKnown RBP31.55■■■□□ 2.64
CSF1R-205ENST00000511344 WRNQ14191 1432 aaPredicted RBP eCLIP31.54■■■□□ 2.64
CSF1R-205ENST00000511344 ZNF608Q9ULD9 1512 aaPredicted RBP31.5■■■□□ 2.63
CSF1R-205ENST00000511344 SYNJ1O43426 1573 aa31.5■■■□□ 2.63
CSF1R-205ENST00000511344 RAD54L2Q9Y4B4 1467 aa31.49■■■□□ 2.63
CSF1R-205ENST00000511344 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
CSF1R-205ENST00000511344 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
CSF1R-205ENST00000511344 SOGA1O94964 1423 aa31.47■■■□□ 2.63
CSF1R-205ENST00000511344 EIF4G3O43432 1585 aaKnown RBP31.41■■■□□ 2.62
CSF1R-205ENST00000511344 WDR97A6NE52 1622 aa31.34■■■□□ 2.61
CSF1R-205ENST00000511344 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.61
CSF1R-205ENST00000511344 TDRD9Q8NDG6 1382 aaKnown RBP31.29■■■□□ 2.6
CSF1R-205ENST00000511344 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.59
CSF1R-205ENST00000511344 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
CSF1R-205ENST00000511344 GAPVD1Q14C86 1478 aa31.12■■■□□ 2.57
CSF1R-205ENST00000511344 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
CSF1R-205ENST00000511344 DNAJC5Q9H3Z4 198 aa31.09■■■□□ 2.57
CSF1R-205ENST00000511344 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
CSF1R-205ENST00000511344 SNAPC4Q5SXM2 1469 aa31.06■■■□□ 2.56
CSF1R-205ENST00000511344 MAGI1Q96QZ7 1491 aaPredicted RBP31■■■□□ 2.55
CSF1R-205ENST00000511344 CHD1O14646 1710 aa30.98■■■□□ 2.55
CSF1R-205ENST00000511344 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
CSF1R-205ENST00000511344 ERICH3Q5RHP9 1530 aa30.89■■■□□ 2.54
CSF1R-205ENST00000511344 SYNJ2O15056 1496 aa30.89■■■□□ 2.53
CSF1R-205ENST00000511344 FBLN2P98095 1184 aa30.88■■■□□ 2.53
CSF1R-205ENST00000511344 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
CSF1R-205ENST00000511344 KIF27Q86VH2 1401 aa30.85■■■□□ 2.53
CSF1R-205ENST00000511344 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
CSF1R-205ENST00000511344 CHMP7Q8WUX9 453 aaPredicted RBP30.81■■■□□ 2.52
CSF1R-205ENST00000511344 FHAD1B1AJZ9 1412 aa30.76■■■□□ 2.51
CSF1R-205ENST00000511344 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
CSF1R-205ENST00000511344 IGF1RP08069 1367 aa30.7■■■□□ 2.51
CSF1R-205ENST00000511344 CUL7Q14999 1698 aa30.65■■■□□ 2.5
CSF1R-205ENST00000511344 RUSC2Q8N2Y8 1516 aa30.65■■■□□ 2.5
CSF1R-205ENST00000511344 CLASP1Q7Z460 1538 aa30.64■■■□□ 2.5
CSF1R-205ENST00000511344 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
CSF1R-205ENST00000511344 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
CSF1R-205ENST00000511344 NUP160Q12769 1436 aa30.56■■■□□ 2.48
CSF1R-205ENST00000511344 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
CSF1R-205ENST00000511344 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
CSF1R-205ENST00000511344 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
CSF1R-205ENST00000511344 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
CSF1R-205ENST00000511344 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
CSF1R-205ENST00000511344 RAPGEF2Q9Y4G8 1499 aa30.38■■■□□ 2.45
CSF1R-205ENST00000511344 SHROOM2Q13796 1616 aa30.34■■■□□ 2.45
CSF1R-205ENST00000511344 EEA1Q15075 1411 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms