RNA–Protein interactions for RNA: ENST00000511278.5

CTNND2-213, Transcript of catenin delta 2, humanhuman

TSL 4

Gene CTNND2, Length 575 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-213ENST00000511278 NISCHQ9Y2I1 1504 aa30.19■■■□□ 2.42
CTNND2-213ENST00000511278 ABCC9O60706 1549 aa27.21■■□□□ 1.95
CTNND2-213ENST00000511278 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
CTNND2-213ENST00000511278 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
CTNND2-213ENST00000511278 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
CTNND2-213ENST00000511278 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
CTNND2-213ENST00000511278 NACADO15069 1562 aa25.64■■□□□ 1.69
CTNND2-213ENST00000511278 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
CTNND2-213ENST00000511278 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
CTNND2-213ENST00000511278 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.63
CTNND2-213ENST00000511278 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
CTNND2-213ENST00000511278 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
CTNND2-213ENST00000511278 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
CTNND2-213ENST00000511278 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
CTNND2-213ENST00000511278 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
CTNND2-213ENST00000511278 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
CTNND2-213ENST00000511278 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
CTNND2-213ENST00000511278 EIF4G1Q04637 1599 aaKnown RBP24.47■■□□□ 1.51
CTNND2-213ENST00000511278 NCAPD3P42695 1498 aa23.69■■□□□ 1.38
CTNND2-213ENST00000511278 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
CTNND2-213ENST00000511278 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
CTNND2-213ENST00000511278 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
CTNND2-213ENST00000511278 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
CTNND2-213ENST00000511278 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
CTNND2-213ENST00000511278 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
CTNND2-213ENST00000511278 CUX2O14529 1486 aa23.44■■□□□ 1.34
CTNND2-213ENST00000511278 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
CTNND2-213ENST00000511278 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
CTNND2-213ENST00000511278 NESP48681 1621 aa23.35■■□□□ 1.33
CTNND2-213ENST00000511278 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
CTNND2-213ENST00000511278 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
CTNND2-213ENST00000511278 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
CTNND2-213ENST00000511278 THOC2Q8NI27 1593 aaKnown RBP23.07■■□□□ 1.28
CTNND2-213ENST00000511278 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
CTNND2-213ENST00000511278 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
CTNND2-213ENST00000511278 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
CTNND2-213ENST00000511278 WIZO95785 1651 aa22.97■■□□□ 1.27
CTNND2-213ENST00000511278 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
CTNND2-213ENST00000511278 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
CTNND2-213ENST00000511278 WDR62O43379 1518 aa22.76■■□□□ 1.23
CTNND2-213ENST00000511278 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
CTNND2-213ENST00000511278 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
CTNND2-213ENST00000511278 CFTRP13569 1480 aa22.69■■□□□ 1.22
CTNND2-213ENST00000511278 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
CTNND2-213ENST00000511278 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
CTNND2-213ENST00000511278 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
CTNND2-213ENST00000511278 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
CTNND2-213ENST00000511278 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
CTNND2-213ENST00000511278 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
CTNND2-213ENST00000511278 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
CTNND2-213ENST00000511278 ZNF608Q9ULD9 1512 aaPredicted RBP22.27■■□□□ 1.16
CTNND2-213ENST00000511278 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
CTNND2-213ENST00000511278 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
CTNND2-213ENST00000511278 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
CTNND2-213ENST00000511278 EIF4G3O43432 1585 aaKnown RBP22.09■■□□□ 1.13
CTNND2-213ENST00000511278 AQRO60306 1485 aaKnown RBP eCLIP22.09■■□□□ 1.13
CTNND2-213ENST00000511278 RIMBP3CA6NJZ7 1639 aa22.07■■□□□ 1.12
CTNND2-213ENST00000511278 RIMBP3BA6NNM3 1639 aa22.07■■□□□ 1.12
CTNND2-213ENST00000511278 RIMBP3Q9UFD9 1639 aa22.07■■□□□ 1.12
CTNND2-213ENST00000511278 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
CTNND2-213ENST00000511278 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
CTNND2-213ENST00000511278 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
CTNND2-213ENST00000511278 FBLN2P98095 1184 aa22■■□□□ 1.11
CTNND2-213ENST00000511278 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
CTNND2-213ENST00000511278 SOGA1O94964 1423 aa21.97■■□□□ 1.11
CTNND2-213ENST00000511278 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
CTNND2-213ENST00000511278 TDRD9Q8NDG6 1382 aaKnown RBP21.95■■□□□ 1.1
CTNND2-213ENST00000511278 CHD1O14646 1710 aa21.94■■□□□ 1.1
CTNND2-213ENST00000511278 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
CTNND2-213ENST00000511278 CUX1P39880 1505 aa21.85■■□□□ 1.09
CTNND2-213ENST00000511278 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
CTNND2-213ENST00000511278 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
CTNND2-213ENST00000511278 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
CTNND2-213ENST00000511278 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
CTNND2-213ENST00000511278 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
CTNND2-213ENST00000511278 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
CTNND2-213ENST00000511278 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
CTNND2-213ENST00000511278 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
CTNND2-213ENST00000511278 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.06
CTNND2-213ENST00000511278 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
CTNND2-213ENST00000511278 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
CTNND2-213ENST00000511278 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
CTNND2-213ENST00000511278 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
CTNND2-213ENST00000511278 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
CTNND2-213ENST00000511278 ABCA5Q8WWZ7 1642 aa21.57■■□□□ 1.04
CTNND2-213ENST00000511278 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
CTNND2-213ENST00000511278 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
CTNND2-213ENST00000511278 TOP2BQ02880 1626 aa21.47■■□□□ 1.03
CTNND2-213ENST00000511278 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
CTNND2-213ENST00000511278 ADAMTS12P58397 1594 aa21.41■■□□□ 1.02
CTNND2-213ENST00000511278 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
CTNND2-213ENST00000511278 NUP160Q12769 1436 aa21.4■■□□□ 1.02
CTNND2-213ENST00000511278 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
CTNND2-213ENST00000511278 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
CTNND2-213ENST00000511278 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
CTNND2-213ENST00000511278 SHROOM2Q13796 1616 aa21.28■■□□□ 1
CTNND2-213ENST00000511278 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
CTNND2-213ENST00000511278 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
CTNND2-213ENST00000511278 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
CTNND2-213ENST00000511278 IGF1RP08069 1367 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms