RNA–Protein interactions for RNA: ENST00000511273.1

CDH18-210, Transcript of cadherin 18, humanhuman

TSL 5 BASIC

Gene CDH18, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-210ENST00000511273 NISCHQ9Y2I1 1504 aa17.24■□□□□ 0.35
CDH18-210ENST00000511273 ABCC9O60706 1549 aa16.59■□□□□ 0.25
CDH18-210ENST00000511273 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
CDH18-210ENST00000511273 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
CDH18-210ENST00000511273 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
CDH18-210ENST00000511273 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
CDH18-210ENST00000511273 NACADO15069 1562 aa15.51■□□□□ 0.07
CDH18-210ENST00000511273 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
CDH18-210ENST00000511273 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
CDH18-210ENST00000511273 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
CDH18-210ENST00000511273 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
CDH18-210ENST00000511273 CUX2O14529 1486 aa15.18■□□□□ 0.02
CDH18-210ENST00000511273 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
CDH18-210ENST00000511273 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
CDH18-210ENST00000511273 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
CDH18-210ENST00000511273 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
CDH18-210ENST00000511273 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
CDH18-210ENST00000511273 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
CDH18-210ENST00000511273 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
CDH18-210ENST00000511273 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
CDH18-210ENST00000511273 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
CDH18-210ENST00000511273 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
CDH18-210ENST00000511273 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
CDH18-210ENST00000511273 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
CDH18-210ENST00000511273 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
CDH18-210ENST00000511273 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
CDH18-210ENST00000511273 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
CDH18-210ENST00000511273 AEBP2Q6ZN18 517 aaPredicted RBP14.1□□□□□ -0.15
CDH18-210ENST00000511273 RIMBP3CA6NJZ7 1639 aa14.02□□□□□ -0.16
CDH18-210ENST00000511273 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.16
CDH18-210ENST00000511273 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.16
CDH18-210ENST00000511273 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
CDH18-210ENST00000511273 WDR62O43379 1518 aa13.98□□□□□ -0.17
CDH18-210ENST00000511273 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
CDH18-210ENST00000511273 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.17
CDH18-210ENST00000511273 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
CDH18-210ENST00000511273 NESP48681 1621 aa13.92□□□□□ -0.18
CDH18-210ENST00000511273 MRC2Q9UBG0 1479 aa13.91□□□□□ -0.18
CDH18-210ENST00000511273 ATAD2BQ9ULI0 1458 aa13.89□□□□□ -0.19
CDH18-210ENST00000511273 ARHGEF11O15085 1522 aa13.84□□□□□ -0.19
CDH18-210ENST00000511273 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
CDH18-210ENST00000511273 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
CDH18-210ENST00000511273 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
CDH18-210ENST00000511273 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
CDH18-210ENST00000511273 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
CDH18-210ENST00000511273 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
CDH18-210ENST00000511273 ARAP1Q96P48 1450 aa13.6□□□□□ -0.23
CDH18-210ENST00000511273 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
CDH18-210ENST00000511273 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
CDH18-210ENST00000511273 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
CDH18-210ENST00000511273 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
CDH18-210ENST00000511273 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
CDH18-210ENST00000511273 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
CDH18-210ENST00000511273 CHD1O14646 1710 aa13.41□□□□□ -0.26
CDH18-210ENST00000511273 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
CDH18-210ENST00000511273 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
CDH18-210ENST00000511273 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
CDH18-210ENST00000511273 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
CDH18-210ENST00000511273 CLASP1Q7Z460 1538 aa13.33□□□□□ -0.28
CDH18-210ENST00000511273 CFTRP13569 1480 aa13.29□□□□□ -0.28
CDH18-210ENST00000511273 SYNJ1O43426 1573 aa13.26□□□□□ -0.29
CDH18-210ENST00000511273 ABCC8Q09428 1581 aa13.26□□□□□ -0.29
CDH18-210ENST00000511273 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
CDH18-210ENST00000511273 KIF13AQ9H1H9 1805 aa13.17□□□□□ -0.3
CDH18-210ENST00000511273 FBXO41Q8TF61 875 aa13.16□□□□□ -0.3
CDH18-210ENST00000511273 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
CDH18-210ENST00000511273 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
CDH18-210ENST00000511273 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
CDH18-210ENST00000511273 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
CDH18-210ENST00000511273 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
CDH18-210ENST00000511273 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
CDH18-210ENST00000511273 MAGI1Q96QZ7 1491 aaPredicted RBP13.07□□□□□ -0.32
CDH18-210ENST00000511273 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
CDH18-210ENST00000511273 KDM6BO15054 1643 aa13.04□□□□□ -0.32
CDH18-210ENST00000511273 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.32
CDH18-210ENST00000511273 SOCS7O14512 581 aa13.01□□□□□ -0.33
CDH18-210ENST00000511273 MAPKBP1O60336 1514 aa12.96□□□□□ -0.34
CDH18-210ENST00000511273 SYNJ2O15056 1496 aa12.96□□□□□ -0.34
CDH18-210ENST00000511273 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
CDH18-210ENST00000511273 SNAPC4Q5SXM2 1469 aa12.93□□□□□ -0.34
CDH18-210ENST00000511273 TOP2AP11388 1531 aaKnown RBP12.92□□□□□ -0.34
CDH18-210ENST00000511273 DIP2BQ9P265 1576 aa12.91□□□□□ -0.34
CDH18-210ENST00000511273 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDH18-210ENST00000511273 ADGRL1O94910 1474 aa12.9□□□□□ -0.34
CDH18-210ENST00000511273 SHROOM2Q13796 1616 aa12.9□□□□□ -0.34
CDH18-210ENST00000511273 WIZO95785 1651 aa12.89□□□□□ -0.35
CDH18-210ENST00000511273 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
CDH18-210ENST00000511273 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
CDH18-210ENST00000511273 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
CDH18-210ENST00000511273 PBRM1Q86U86 1689 aa12.83□□□□□ -0.36
CDH18-210ENST00000511273 FBLN2P98095 1184 aa12.82□□□□□ -0.36
CDH18-210ENST00000511273 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
CDH18-210ENST00000511273 CHMP7Q8WUX9 453 aaPredicted RBP12.79□□□□□ -0.36
CDH18-210ENST00000511273 SPATA31D1Q6ZQQ2 1576 aa12.75□□□□□ -0.37
CDH18-210ENST00000511273 NUP160Q12769 1436 aa12.73□□□□□ -0.37
CDH18-210ENST00000511273 GLI2P10070 1586 aa12.73□□□□□ -0.37
CDH18-210ENST00000511273 SOGA1O94964 1423 aa12.71□□□□□ -0.38
CDH18-210ENST00000511273 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
CDH18-210ENST00000511273 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
CDH18-210ENST00000511273 ABCA5Q8WWZ7 1642 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms