RNA–Protein interactions for RNA: ENST00000511262.5

NEK11-213, Transcript of NIMA related kinase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK11, Length 2,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-213ENST00000511262 NISCHQ9Y2I1 1504 aa30.16■■■□□ 2.42
NEK11-213ENST00000511262 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
NEK11-213ENST00000511262 ABCC9O60706 1549 aa26.44■■□□□ 1.82
NEK11-213ENST00000511262 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
NEK11-213ENST00000511262 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
NEK11-213ENST00000511262 NACADO15069 1562 aa25.17■■□□□ 1.62
NEK11-213ENST00000511262 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
NEK11-213ENST00000511262 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
NEK11-213ENST00000511262 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
NEK11-213ENST00000511262 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
NEK11-213ENST00000511262 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
NEK11-213ENST00000511262 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
NEK11-213ENST00000511262 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
NEK11-213ENST00000511262 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
NEK11-213ENST00000511262 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
NEK11-213ENST00000511262 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
NEK11-213ENST00000511262 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
NEK11-213ENST00000511262 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
NEK11-213ENST00000511262 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
NEK11-213ENST00000511262 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
NEK11-213ENST00000511262 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
NEK11-213ENST00000511262 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
NEK11-213ENST00000511262 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
NEK11-213ENST00000511262 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
NEK11-213ENST00000511262 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.3
NEK11-213ENST00000511262 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
NEK11-213ENST00000511262 PEG3Q9GZU2 1588 aa23.11■■□□□ 1.29
NEK11-213ENST00000511262 WIZO95785 1651 aa23.1■■□□□ 1.29
NEK11-213ENST00000511262 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
NEK11-213ENST00000511262 NESP48681 1621 aa22.88■■□□□ 1.25
NEK11-213ENST00000511262 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
NEK11-213ENST00000511262 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
NEK11-213ENST00000511262 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
NEK11-213ENST00000511262 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
NEK11-213ENST00000511262 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
NEK11-213ENST00000511262 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
NEK11-213ENST00000511262 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
NEK11-213ENST00000511262 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
NEK11-213ENST00000511262 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
NEK11-213ENST00000511262 CFTRP13569 1480 aa22.44■■□□□ 1.18
NEK11-213ENST00000511262 CUX2O14529 1486 aa22.39■■□□□ 1.18
NEK11-213ENST00000511262 FANCD2Q9BXW9 1451 aa22.39■■□□□ 1.18
NEK11-213ENST00000511262 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
NEK11-213ENST00000511262 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
NEK11-213ENST00000511262 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
NEK11-213ENST00000511262 WDR62O43379 1518 aa22.23■■□□□ 1.15
NEK11-213ENST00000511262 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
NEK11-213ENST00000511262 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
NEK11-213ENST00000511262 DNMBPQ6XZF7 1577 aa21.96■■□□□ 1.11
NEK11-213ENST00000511262 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
NEK11-213ENST00000511262 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
NEK11-213ENST00000511262 CUX1P39880 1505 aa21.86■■□□□ 1.09
NEK11-213ENST00000511262 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
NEK11-213ENST00000511262 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
NEK11-213ENST00000511262 RAD54L2Q9Y4B4 1467 aa21.81■■□□□ 1.08
NEK11-213ENST00000511262 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
NEK11-213ENST00000511262 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
NEK11-213ENST00000511262 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.08
NEK11-213ENST00000511262 EIF4G3O43432 1585 aaKnown RBP21.76■■□□□ 1.07
NEK11-213ENST00000511262 SOGA1O94964 1423 aa21.74■■□□□ 1.07
NEK11-213ENST00000511262 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
NEK11-213ENST00000511262 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
NEK11-213ENST00000511262 TDRD9Q8NDG6 1382 aaKnown RBP21.69■■□□□ 1.06
NEK11-213ENST00000511262 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
NEK11-213ENST00000511262 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
NEK11-213ENST00000511262 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
NEK11-213ENST00000511262 WDR97A6NE52 1622 aa21.58■■□□□ 1.05
NEK11-213ENST00000511262 FBLN2P98095 1184 aa21.55■■□□□ 1.04
NEK11-213ENST00000511262 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
NEK11-213ENST00000511262 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
NEK11-213ENST00000511262 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
NEK11-213ENST00000511262 CHD1O14646 1710 aa21.5■■□□□ 1.03
NEK11-213ENST00000511262 GAPVD1Q14C86 1478 aa21.48■■□□□ 1.03
NEK11-213ENST00000511262 PBRM1Q86U86 1689 aa21.48■■□□□ 1.03
NEK11-213ENST00000511262 ABCA5Q8WWZ7 1642 aa21.47■■□□□ 1.03
NEK11-213ENST00000511262 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
NEK11-213ENST00000511262 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
NEK11-213ENST00000511262 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
NEK11-213ENST00000511262 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
NEK11-213ENST00000511262 ADAMTS12P58397 1594 aa21.28■■□□□ 1
NEK11-213ENST00000511262 TRIM41Q8WV44 630 aa21.27■■□□□ 1
NEK11-213ENST00000511262 RIMBP3CA6NJZ7 1639 aa21.24■□□□□ 0.99
NEK11-213ENST00000511262 RIMBP3BA6NNM3 1639 aa21.24■□□□□ 0.99
NEK11-213ENST00000511262 RIMBP3Q9UFD9 1639 aa21.24■□□□□ 0.99
NEK11-213ENST00000511262 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
NEK11-213ENST00000511262 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
NEK11-213ENST00000511262 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
NEK11-213ENST00000511262 KIF27Q86VH2 1401 aa21.2■□□□□ 0.99
NEK11-213ENST00000511262 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
NEK11-213ENST00000511262 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
NEK11-213ENST00000511262 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
NEK11-213ENST00000511262 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
NEK11-213ENST00000511262 IGF1RP08069 1367 aa21.13■□□□□ 0.97
NEK11-213ENST00000511262 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
NEK11-213ENST00000511262 NUP160Q12769 1436 aa21.07■□□□□ 0.96
NEK11-213ENST00000511262 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
NEK11-213ENST00000511262 CUL7Q14999 1698 aa21.06■□□□□ 0.96
NEK11-213ENST00000511262 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.96
NEK11-213ENST00000511262 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
NEK11-213ENST00000511262 SHROOM2Q13796 1616 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms