RNA–Protein interactions for RNA: ENST00000511226.5

SPOCK3-216, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-216ENST00000511226 NISCHQ9Y2I1 1504 aa45.31■■■■■ 4.84
SPOCK3-216ENST00000511226 ABCC9O60706 1549 aa42.44■■■■■ 4.38
SPOCK3-216ENST00000511226 CCDC180Q9P1Z9 1646 aa40.99■■■■■ 4.15
SPOCK3-216ENST00000511226 DNAJC5BQ9UF47 199 aa40.97■■■■■ 4.15
SPOCK3-216ENST00000511226 RB1CC1Q8TDY2 1594 aa39.72■■■■□ 3.95
SPOCK3-216ENST00000511226 PABPN1Q86U42 306 aaKnown RBP eCLIP39.46■■■■□ 3.91
SPOCK3-216ENST00000511226 NACADO15069 1562 aa39.15■■■■□ 3.86
SPOCK3-216ENST00000511226 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
SPOCK3-216ENST00000511226 UNC13AQ9UPW8 1703 aa38.69■■■■□ 3.78
SPOCK3-216ENST00000511226 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
SPOCK3-216ENST00000511226 DNAJC5Q9H3Z4 198 aa38.44■■■■□ 3.74
SPOCK3-216ENST00000511226 CECR2Q9BXF3 1484 aa38.32■■■■□ 3.72
SPOCK3-216ENST00000511226 CC2D2AQ9P2K1 1620 aa38.16■■■■□ 3.7
SPOCK3-216ENST00000511226 MYO15BQ96JP2 1530 aa38.15■■■■□ 3.7
SPOCK3-216ENST00000511226 SHROOM4Q9ULL8 1493 aa37.86■■■■□ 3.65
SPOCK3-216ENST00000511226 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.64
SPOCK3-216ENST00000511226 SCRIBQ14160 1630 aa37.45■■■■□ 3.59
SPOCK3-216ENST00000511226 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
SPOCK3-216ENST00000511226 DCAF1Q9Y4B6 1507 aa37.25■■■■□ 3.55
SPOCK3-216ENST00000511226 CUX2O14529 1486 aa36.94■■■■□ 3.5
SPOCK3-216ENST00000511226 ERCC6Q03468 1493 aa36.71■■■■□ 3.47
SPOCK3-216ENST00000511226 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
SPOCK3-216ENST00000511226 NCAPD3P42695 1498 aa36.23■■■■□ 3.39
SPOCK3-216ENST00000511226 NESP48681 1621 aa36.1■■■■□ 3.37
SPOCK3-216ENST00000511226 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
SPOCK3-216ENST00000511226 THOC2Q8NI27 1593 aaKnown RBP35.8■■■■□ 3.32
SPOCK3-216ENST00000511226 HMGXB3Q12766 1538 aa35.74■■■■□ 3.31
SPOCK3-216ENST00000511226 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
SPOCK3-216ENST00000511226 BAZ1BQ9UIG0 1483 aaKnown RBP35.54■■■■□ 3.28
SPOCK3-216ENST00000511226 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
SPOCK3-216ENST00000511226 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.28
SPOCK3-216ENST00000511226 PDS5BQ9NTI5 1447 aa35.47■■■■□ 3.27
SPOCK3-216ENST00000511226 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
SPOCK3-216ENST00000511226 OSCARQ8IYS5 282 aa35.25■■■■□ 3.23
SPOCK3-216ENST00000511226 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
SPOCK3-216ENST00000511226 MRC2Q9UBG0 1479 aa35.2■■■■□ 3.23
SPOCK3-216ENST00000511226 PEG3Q9GZU2 1588 aa35.14■■■■□ 3.22
SPOCK3-216ENST00000511226 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
SPOCK3-216ENST00000511226 WDR62O43379 1518 aa35.07■■■■□ 3.21
SPOCK3-216ENST00000511226 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
SPOCK3-216ENST00000511226 CEP164Q9UPV0 1460 aa34.83■■■■□ 3.17
SPOCK3-216ENST00000511226 RIMBP3CA6NJZ7 1639 aa34.73■■■■□ 3.15
SPOCK3-216ENST00000511226 RIMBP3BA6NNM3 1639 aa34.73■■■■□ 3.15
SPOCK3-216ENST00000511226 RIMBP3Q9UFD9 1639 aa34.73■■■■□ 3.15
SPOCK3-216ENST00000511226 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
SPOCK3-216ENST00000511226 TRHP20396 242 aaPredicted RBP34.6■■■■□ 3.13
SPOCK3-216ENST00000511226 CYB5RLQ6IPT4 315 aa34.57■■■■□ 3.12
SPOCK3-216ENST00000511226 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
SPOCK3-216ENST00000511226 URB2Q14146 1524 aaKnown RBP34.48■■■■□ 3.11
SPOCK3-216ENST00000511226 AEBP2Q6ZN18 517 aaPredicted RBP34.46■■■■□ 3.11
SPOCK3-216ENST00000511226 CFTRP13569 1480 aa34.42■■■■□ 3.1
SPOCK3-216ENST00000511226 WIZO95785 1651 aa34.41■■■■□ 3.1
SPOCK3-216ENST00000511226 ZNF608Q9ULD9 1512 aaPredicted RBP34.29■■■■□ 3.08
SPOCK3-216ENST00000511226 IFT140Q96RY7 1462 aa34.18■■■■□ 3.06
SPOCK3-216ENST00000511226 RSF1Q96T23 1441 aaPredicted RBP34.17■■■■□ 3.06
SPOCK3-216ENST00000511226 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
SPOCK3-216ENST00000511226 FBLN2P98095 1184 aa34.03■■■■□ 3.04
SPOCK3-216ENST00000511226 EIF4G3O43432 1585 aaKnown RBP33.9■■■■□ 3.02
SPOCK3-216ENST00000511226 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
SPOCK3-216ENST00000511226 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.01
SPOCK3-216ENST00000511226 TOP2AP11388 1531 aaKnown RBP33.87■■■■□ 3.01
SPOCK3-216ENST00000511226 CHD1O14646 1710 aa33.85■■■■□ 3.01
SPOCK3-216ENST00000511226 SUPT5HO00267 1087 aaKnown RBP33.77■■■■□ 3
SPOCK3-216ENST00000511226 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
SPOCK3-216ENST00000511226 ABCC8Q09428 1581 aa33.71■■■□□ 2.99
SPOCK3-216ENST00000511226 CCDC88BA6NC98 1476 aa33.61■■■□□ 2.97
SPOCK3-216ENST00000511226 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
SPOCK3-216ENST00000511226 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
SPOCK3-216ENST00000511226 CHMP7Q8WUX9 453 aaPredicted RBP33.53■■■□□ 2.96
SPOCK3-216ENST00000511226 TDRD9Q8NDG6 1382 aaKnown RBP33.52■■■□□ 2.96
SPOCK3-216ENST00000511226 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
SPOCK3-216ENST00000511226 POLA1P09884 1462 aaPredicted RBP33.47■■■□□ 2.95
SPOCK3-216ENST00000511226 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
SPOCK3-216ENST00000511226 SNAPC4Q5SXM2 1469 aa33.43■■■□□ 2.94
SPOCK3-216ENST00000511226 SOGA1O94964 1423 aa33.39■■■□□ 2.94
SPOCK3-216ENST00000511226 SYNJ1O43426 1573 aa33.37■■■□□ 2.93
SPOCK3-216ENST00000511226 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
SPOCK3-216ENST00000511226 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
SPOCK3-216ENST00000511226 SYNJ2O15056 1496 aa33.17■■■□□ 2.9
SPOCK3-216ENST00000511226 GRIN2BQ13224 1484 aa33.17■■■□□ 2.9
SPOCK3-216ENST00000511226 FGD5Q6ZNL6 1462 aa33.11■■■□□ 2.89
SPOCK3-216ENST00000511226 WDR97A6NE52 1622 aa33.09■■■□□ 2.89
SPOCK3-216ENST00000511226 ILDR1Q86SU0 546 aaPredicted RBP33.08■■■□□ 2.89
SPOCK3-216ENST00000511226 ERCC6L2Q5T890 1561 aa32.96■■■□□ 2.87
SPOCK3-216ENST00000511226 CUX1P39880 1505 aa32.87■■■□□ 2.85
SPOCK3-216ENST00000511226 KDM4FA0A1W2PPD8 638 aa32.82■■■□□ 2.84
SPOCK3-216ENST00000511226 PBRM1Q86U86 1689 aa32.79■■■□□ 2.84
SPOCK3-216ENST00000511226 CEP170Q5SW79 1584 aa32.75■■■□□ 2.83
SPOCK3-216ENST00000511226 FAM69CQ0P6D2 419 aa32.75■■■□□ 2.83
SPOCK3-216ENST00000511226 KIF13AQ9H1H9 1805 aa32.74■■■□□ 2.83
SPOCK3-216ENST00000511226 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
SPOCK3-216ENST00000511226 NUP160Q12769 1436 aa32.64■■■□□ 2.82
SPOCK3-216ENST00000511226 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
SPOCK3-216ENST00000511226 ABCA5Q8WWZ7 1642 aa32.6■■■□□ 2.81
SPOCK3-216ENST00000511226 NPM1P06748 294 aaKnown RBP eCLIP32.57■■■□□ 2.8
SPOCK3-216ENST00000511226 ABCC10Q5T3U5 1492 aa32.56■■■□□ 2.8
SPOCK3-216ENST00000511226 SHROOM2Q13796 1616 aa32.53■■■□□ 2.8
SPOCK3-216ENST00000511226 PRG4Q92954 1404 aaPredicted RBP32.52■■■□□ 2.8
SPOCK3-216ENST00000511226 JPH4Q96JJ6 628 aa32.47■■■□□ 2.79
SPOCK3-216ENST00000511226 ADAMTS12P58397 1594 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms