RNA–Protein interactions for RNA: ENST00000511168.5

MRPL3-209, Transcript of mitochondrial ribosomal protein L3, humanhuman

TSL 2

Gene MRPL3, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3-209ENST00000511168 NISCHQ9Y2I1 1504 aa42.24■■■■■ 4.35
MRPL3-209ENST00000511168 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
MRPL3-209ENST00000511168 ABCC9O60706 1549 aa37.03■■■■□ 3.52
MRPL3-209ENST00000511168 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
MRPL3-209ENST00000511168 DCAF8L2P0C7V8 631 aa35.48■■■■□ 3.27
MRPL3-209ENST00000511168 NACADO15069 1562 aa35.46■■■■□ 3.27
MRPL3-209ENST00000511168 MYO15BQ96JP2 1530 aa35.17■■■■□ 3.22
MRPL3-209ENST00000511168 ZCCHC6Q5VYS8 1495 aaKnown RBP35.12■■■■□ 3.21
MRPL3-209ENST00000511168 DCAF1Q9Y4B6 1507 aa34.94■■■■□ 3.18
MRPL3-209ENST00000511168 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
MRPL3-209ENST00000511168 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.13
MRPL3-209ENST00000511168 BICRAQ9NZM4 1560 aa34.42■■■■□ 3.1
MRPL3-209ENST00000511168 SCRIBQ14160 1630 aa34.35■■■■□ 3.09
MRPL3-209ENST00000511168 DNAJC5BQ9UF47 199 aa34.11■■■■□ 3.05
MRPL3-209ENST00000511168 SHROOM4Q9ULL8 1493 aa34.1■■■■□ 3.05
MRPL3-209ENST00000511168 EIF4G1Q04637 1599 aaKnown RBP33.57■■■□□ 2.96
MRPL3-209ENST00000511168 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
MRPL3-209ENST00000511168 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
MRPL3-209ENST00000511168 SMARCA4P51532 1647 aa32.83■■■□□ 2.85
MRPL3-209ENST00000511168 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
MRPL3-209ENST00000511168 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
MRPL3-209ENST00000511168 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
MRPL3-209ENST00000511168 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
MRPL3-209ENST00000511168 MROH2BQ7Z745 1585 aa32.54■■■□□ 2.8
MRPL3-209ENST00000511168 HMGXB3Q12766 1538 aa32.54■■■□□ 2.8
MRPL3-209ENST00000511168 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
MRPL3-209ENST00000511168 BAZ1BQ9UIG0 1483 aaKnown RBP32.45■■■□□ 2.78
MRPL3-209ENST00000511168 WIZO95785 1651 aa32.2■■■□□ 2.75
MRPL3-209ENST00000511168 RSF1Q96T23 1441 aaPredicted RBP32.11■■■□□ 2.73
MRPL3-209ENST00000511168 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
MRPL3-209ENST00000511168 NESP48681 1621 aa31.97■■■□□ 2.71
MRPL3-209ENST00000511168 LAMC3Q9Y6N6 1575 aa31.9■■■□□ 2.7
MRPL3-209ENST00000511168 TOP2AP11388 1531 aaKnown RBP31.84■■■□□ 2.69
MRPL3-209ENST00000511168 CADPSQ9ULU8 1353 aa31.76■■■□□ 2.68
MRPL3-209ENST00000511168 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
MRPL3-209ENST00000511168 CUX2O14529 1486 aa31.68■■■□□ 2.66
MRPL3-209ENST00000511168 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
MRPL3-209ENST00000511168 THOC2Q8NI27 1593 aaKnown RBP31.52■■■□□ 2.64
MRPL3-209ENST00000511168 CFTRP13569 1480 aa31.52■■■□□ 2.64
MRPL3-209ENST00000511168 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
MRPL3-209ENST00000511168 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
MRPL3-209ENST00000511168 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
MRPL3-209ENST00000511168 MRC2Q9UBG0 1479 aa31.37■■■□□ 2.61
MRPL3-209ENST00000511168 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
MRPL3-209ENST00000511168 WDR62O43379 1518 aa31.25■■■□□ 2.59
MRPL3-209ENST00000511168 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
MRPL3-209ENST00000511168 URB2Q14146 1524 aaKnown RBP31.06■■■□□ 2.56
MRPL3-209ENST00000511168 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
MRPL3-209ENST00000511168 ABCC8Q09428 1581 aa30.89■■■□□ 2.54
MRPL3-209ENST00000511168 TOPBP1Q92547 1522 aa30.86■■■□□ 2.53
MRPL3-209ENST00000511168 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
MRPL3-209ENST00000511168 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
MRPL3-209ENST00000511168 POLA1P09884 1462 aaPredicted RBP30.58■■■□□ 2.49
MRPL3-209ENST00000511168 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.48
MRPL3-209ENST00000511168 CUX1P39880 1505 aa30.54■■■□□ 2.48
MRPL3-209ENST00000511168 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
MRPL3-209ENST00000511168 SOGA1O94964 1423 aa30.49■■■□□ 2.47
MRPL3-209ENST00000511168 FGD5Q6ZNL6 1462 aa30.48■■■□□ 2.47
MRPL3-209ENST00000511168 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
MRPL3-209ENST00000511168 RAD54L2Q9Y4B4 1467 aa30.44■■■□□ 2.46
MRPL3-209ENST00000511168 AQRO60306 1485 aaKnown RBP eCLIP30.4■■■□□ 2.462e-8■■■■■ 42.3
MRPL3-209ENST00000511168 OSCARQ8IYS5 282 aa30.39■■■□□ 2.45
MRPL3-209ENST00000511168 TDRD9Q8NDG6 1382 aaKnown RBP30.33■■■□□ 2.45
MRPL3-209ENST00000511168 WRNQ14191 1432 aaPredicted RBP eCLIP30.32■■■□□ 2.44
MRPL3-209ENST00000511168 WDR97A6NE52 1622 aa30.31■■■□□ 2.44
MRPL3-209ENST00000511168 TOP2BQ02880 1626 aa30.25■■■□□ 2.43
MRPL3-209ENST00000511168 BIVM-ERCC5R4GMW8 1640 aa30.24■■■□□ 2.43
MRPL3-209ENST00000511168 SYNJ1O43426 1573 aa30.21■■■□□ 2.43
MRPL3-209ENST00000511168 ABCA10Q8WWZ4 1543 aa30.18■■■□□ 2.42
MRPL3-209ENST00000511168 GRIN2BQ13224 1484 aa30.15■■■□□ 2.42
MRPL3-209ENST00000511168 FBLN2P98095 1184 aa30.15■■■□□ 2.42
MRPL3-209ENST00000511168 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
MRPL3-209ENST00000511168 CHD1O14646 1710 aa30.13■■■□□ 2.41
MRPL3-209ENST00000511168 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
MRPL3-209ENST00000511168 MAGI1Q96QZ7 1491 aaPredicted RBP30.09■■■□□ 2.41
MRPL3-209ENST00000511168 PBRM1Q86U86 1689 aa30.07■■■□□ 2.4
MRPL3-209ENST00000511168 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
MRPL3-209ENST00000511168 CHMP7Q8WUX9 453 aaPredicted RBP30.03■■■□□ 2.4
MRPL3-209ENST00000511168 SYNJ2O15056 1496 aa29.97■■■□□ 2.39
MRPL3-209ENST00000511168 TRIM41Q8WV44 630 aa29.87■■■□□ 2.37
MRPL3-209ENST00000511168 RIMBP3CA6NJZ7 1639 aa29.86■■■□□ 2.37
MRPL3-209ENST00000511168 RIMBP3BA6NNM3 1639 aa29.86■■■□□ 2.37
MRPL3-209ENST00000511168 RIMBP3Q9UFD9 1639 aa29.86■■■□□ 2.37
MRPL3-209ENST00000511168 ERICH3Q5RHP9 1530 aa29.83■■■□□ 2.37
MRPL3-209ENST00000511168 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
MRPL3-209ENST00000511168 ADAMTS12P58397 1594 aa29.79■■■□□ 2.36
MRPL3-209ENST00000511168 CLASP1Q7Z460 1538 aa29.77■■■□□ 2.36
MRPL3-209ENST00000511168 FHAD1B1AJZ9 1412 aa29.77■■■□□ 2.36
MRPL3-209ENST00000511168 GRIN2AQ12879 1464 aa29.75■■■□□ 2.35
MRPL3-209ENST00000511168 KIF27Q86VH2 1401 aa29.71■■■□□ 2.35
MRPL3-209ENST00000511168 NUP160Q12769 1436 aa29.6■■■□□ 2.33
MRPL3-209ENST00000511168 CYB5RLQ6IPT4 315 aa29.6■■■□□ 2.33
MRPL3-209ENST00000511168 CEP170Q5SW79 1584 aa29.58■■■□□ 2.33
MRPL3-209ENST00000511168 IGF1RP08069 1367 aa29.58■■■□□ 2.33
MRPL3-209ENST00000511168 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
MRPL3-209ENST00000511168 CUL7Q14999 1698 aa29.55■■■□□ 2.32
MRPL3-209ENST00000511168 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
MRPL3-209ENST00000511168 SHROOM2Q13796 1616 aa29.4■■■□□ 2.3
MRPL3-209ENST00000511168 RUSC2Q8N2Y8 1516 aa29.36■■■□□ 2.29
MRPL3-209ENST00000511168 JPH4Q96JJ6 628 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms