RNA–Protein interactions for RNA: ENST00000511162.1

SERF1A-206, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-206ENST00000511162 NISCHQ9Y2I1 1504 aa52.81■■■■■ 6.05
SERF1A-206ENST00000511162 CCDC180Q9P1Z9 1646 aa46.86■■■■■ 5.09
SERF1A-206ENST00000511162 ABCC9O60706 1549 aa45.98■■■■■ 4.95
SERF1A-206ENST00000511162 ZCCHC6Q5VYS8 1495 aaKnown RBP44.06■■■■■ 4.64
SERF1A-206ENST00000511162 RB1CC1Q8TDY2 1594 aa44.05■■■■■ 4.64
SERF1A-206ENST00000511162 NACADO15069 1562 aa44.04■■■■■ 4.64
SERF1A-206ENST00000511162 DCAF8L2P0C7V8 631 aa44.02■■■■■ 4.64
SERF1A-206ENST00000511162 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
SERF1A-206ENST00000511162 DCAF1Q9Y4B6 1507 aa43.7■■■■■ 4.59
SERF1A-206ENST00000511162 UNC13AQ9UPW8 1703 aa43.1■■■■■ 4.49
SERF1A-206ENST00000511162 DNAJC5BQ9UF47 199 aa42.83■■■■■ 4.45
SERF1A-206ENST00000511162 PABPN1Q86U42 306 aaKnown RBP eCLIP42.81■■■■■ 4.44
SERF1A-206ENST00000511162 SCRIBQ14160 1630 aa42.8■■■■■ 4.44
SERF1A-206ENST00000511162 BICRAQ9NZM4 1560 aa42.75■■■■■ 4.43
SERF1A-206ENST00000511162 SHROOM4Q9ULL8 1493 aa42.3■■■■■ 4.36
SERF1A-206ENST00000511162 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.26
SERF1A-206ENST00000511162 CC2D2AQ9P2K1 1620 aa41.62■■■■■ 4.25
SERF1A-206ENST00000511162 CECR2Q9BXF3 1484 aa41.4■■■■■ 4.22
SERF1A-206ENST00000511162 SMARCA4P51532 1647 aa40.94■■■■■ 4.14
SERF1A-206ENST00000511162 BAZ1AQ9NRL2 1556 aaPredicted RBP40.92■■■■■ 4.14
SERF1A-206ENST00000511162 MROH2BQ7Z745 1585 aa40.72■■■■■ 4.11
SERF1A-206ENST00000511162 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
SERF1A-206ENST00000511162 SMARCA2P51531 1590 aa40.65■■■■■ 4.1
SERF1A-206ENST00000511162 NCAPD3P42695 1498 aa40.64■■■■■ 4.1
SERF1A-206ENST00000511162 PEG3Q9GZU2 1588 aa40.55■■■■■ 4.08
SERF1A-206ENST00000511162 HMGXB3Q12766 1538 aa40.47■■■■■ 4.07
SERF1A-206ENST00000511162 BAZ1BQ9UIG0 1483 aaKnown RBP40.38■■■■■ 4.05
SERF1A-206ENST00000511162 RSF1Q96T23 1441 aaPredicted RBP40.31■■■■■ 4.04
SERF1A-206ENST00000511162 WIZO95785 1651 aa40.24■■■■■ 4.03
SERF1A-206ENST00000511162 TOP2AP11388 1531 aaKnown RBP39.87■■■■□ 3.97
SERF1A-206ENST00000511162 ERCC6Q03468 1493 aa39.64■■■■□ 3.94
SERF1A-206ENST00000511162 NESP48681 1621 aa39.64■■■■□ 3.94
SERF1A-206ENST00000511162 CUX2O14529 1486 aa39.53■■■■□ 3.92
SERF1A-206ENST00000511162 LAMC3Q9Y6N6 1575 aa39.53■■■■□ 3.92
SERF1A-206ENST00000511162 CADPSQ9ULU8 1353 aa39.46■■■■□ 3.91
SERF1A-206ENST00000511162 CCDC88BA6NC98 1476 aa39.38■■■■□ 3.9
SERF1A-206ENST00000511162 SUPT5HO00267 1087 aaKnown RBP39.37■■■■□ 3.89
SERF1A-206ENST00000511162 CFTRP13569 1480 aa39.28■■■■□ 3.88
SERF1A-206ENST00000511162 PDS5BQ9NTI5 1447 aa39.27■■■■□ 3.88
SERF1A-206ENST00000511162 THOC2Q8NI27 1593 aaKnown RBP39.24■■■■□ 3.87
SERF1A-206ENST00000511162 KIF21AQ7Z4S6 1674 aa39.2■■■■□ 3.87
SERF1A-206ENST00000511162 DNAJC5Q9H3Z4 198 aa39.04■■■■□ 3.84
SERF1A-206ENST00000511162 FANCD2Q9BXW9 1451 aa39.03■■■■□ 3.84
SERF1A-206ENST00000511162 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
SERF1A-206ENST00000511162 PRDM2Q13029 1718 aa38.89■■■■□ 3.82
SERF1A-206ENST00000511162 MRC2Q9UBG0 1479 aa38.89■■■■□ 3.82
SERF1A-206ENST00000511162 WDR62O43379 1518 aa38.76■■■■□ 3.8
SERF1A-206ENST00000511162 URB2Q14146 1524 aaKnown RBP38.63■■■■□ 3.78
SERF1A-206ENST00000511162 TOPBP1Q92547 1522 aa38.43■■■■□ 3.74
SERF1A-206ENST00000511162 ABCC8Q09428 1581 aa38.39■■■■□ 3.74
SERF1A-206ENST00000511162 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
SERF1A-206ENST00000511162 CUX1P39880 1505 aa38.19■■■■□ 3.7
SERF1A-206ENST00000511162 IFT140Q96RY7 1462 aa38.14■■■■□ 3.7
SERF1A-206ENST00000511162 POLA1P09884 1462 aaPredicted RBP38.11■■■■□ 3.69
SERF1A-206ENST00000511162 FGD5Q6ZNL6 1462 aa38.04■■■■□ 3.68
SERF1A-206ENST00000511162 WRNQ14191 1432 aaPredicted RBP eCLIP38■■■■□ 3.67
SERF1A-206ENST00000511162 TARBP1Q13395 1621 aaKnown RBP37.98■■■■□ 3.67
SERF1A-206ENST00000511162 ZNF608Q9ULD9 1512 aaPredicted RBP37.97■■■■□ 3.67
SERF1A-206ENST00000511162 RAD54L2Q9Y4B4 1467 aa37.94■■■■□ 3.66
SERF1A-206ENST00000511162 SOGA1O94964 1423 aa37.94■■■■□ 3.66
SERF1A-206ENST00000511162 SYNJ1O43426 1573 aa37.89■■■■□ 3.66
SERF1A-206ENST00000511162 TOP2BQ02880 1626 aa37.88■■■■□ 3.65
SERF1A-206ENST00000511162 BIVM-ERCC5R4GMW8 1640 aa37.87■■■■□ 3.65
SERF1A-206ENST00000511162 EIF4G3O43432 1585 aaKnown RBP37.82■■■■□ 3.65
SERF1A-206ENST00000511162 AQRO60306 1485 aaKnown RBP eCLIP37.76■■■■□ 3.63
SERF1A-206ENST00000511162 TDRD9Q8NDG6 1382 aaKnown RBP37.72■■■■□ 3.63
SERF1A-206ENST00000511162 OSCARQ8IYS5 282 aa37.7■■■■□ 3.63
SERF1A-206ENST00000511162 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
SERF1A-206ENST00000511162 ABCA10Q8WWZ4 1543 aa37.68■■■■□ 3.62
SERF1A-206ENST00000511162 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.59
SERF1A-206ENST00000511162 ABCA5Q8WWZ7 1642 aa37.5■■■■□ 3.59
SERF1A-206ENST00000511162 GRIN2BQ13224 1484 aa37.49■■■■□ 3.59
SERF1A-206ENST00000511162 SNAPC4Q5SXM2 1469 aa37.43■■■■□ 3.58
SERF1A-206ENST00000511162 TRIM41Q8WV44 630 aa37.39■■■■□ 3.58
SERF1A-206ENST00000511162 CHD1O14646 1710 aa37.38■■■■□ 3.57
SERF1A-206ENST00000511162 MAGI1Q96QZ7 1491 aaPredicted RBP37.38■■■■□ 3.57
SERF1A-206ENST00000511162 PBRM1Q86U86 1689 aa37.37■■■■□ 3.57
SERF1A-206ENST00000511162 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
SERF1A-206ENST00000511162 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
SERF1A-206ENST00000511162 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
SERF1A-206ENST00000511162 FBLN2P98095 1184 aa37.25■■■■□ 3.55
SERF1A-206ENST00000511162 SYNJ2O15056 1496 aa37.23■■■■□ 3.55
SERF1A-206ENST00000511162 ERICH3Q5RHP9 1530 aa37.21■■■■□ 3.55
SERF1A-206ENST00000511162 KIF27Q86VH2 1401 aa37.19■■■■□ 3.54
SERF1A-206ENST00000511162 ARHGEF11O15085 1522 aa37.17■■■■□ 3.54
SERF1A-206ENST00000511162 CHMP7Q8WUX9 453 aaPredicted RBP37.17■■■■□ 3.54
SERF1A-206ENST00000511162 ADAMTS12P58397 1594 aa37.15■■■■□ 3.54
SERF1A-206ENST00000511162 FHAD1B1AJZ9 1412 aa37.09■■■■□ 3.53
SERF1A-206ENST00000511162 GRIN2AQ12879 1464 aa37.01■■■■□ 3.52
SERF1A-206ENST00000511162 IGF1RP08069 1367 aa37.01■■■■□ 3.51
SERF1A-206ENST00000511162 CLASP1Q7Z460 1538 aa36.96■■■■□ 3.51
SERF1A-206ENST00000511162 CUL7Q14999 1698 aa36.89■■■■□ 3.5
SERF1A-206ENST00000511162 RUSC2Q8N2Y8 1516 aa36.89■■■■□ 3.5
SERF1A-206ENST00000511162 NUP160Q12769 1436 aa36.85■■■■□ 3.49
SERF1A-206ENST00000511162 ARAP1Q96P48 1450 aa36.83■■■■□ 3.49
SERF1A-206ENST00000511162 CHIC1Q5VXU3 224 aa36.82■■■■□ 3.48
SERF1A-206ENST00000511162 CEP170Q5SW79 1584 aa36.82■■■■□ 3.48
SERF1A-206ENST00000511162 CARMIL1Q5VZK9 1371 aa36.79■■■■□ 3.48
SERF1A-206ENST00000511162 CYB5RLQ6IPT4 315 aa36.77■■■■□ 3.48
SERF1A-206ENST00000511162 RAPGEF2Q9Y4G8 1499 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms