RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 NISCHQ9Y2I1 1504 aa57.86■■■■■ 6.85
SMAD5-207ENST00000511116 CCDC180Q9P1Z9 1646 aa52■■■■■ 5.92
SMAD5-207ENST00000511116 ABCC9O60706 1549 aa51.99■■■■■ 5.91
SMAD5-207ENST00000511116 RB1CC1Q8TDY2 1594 aa49.52■■■■■ 5.52
SMAD5-207ENST00000511116 NACADO15069 1562 aa49.19■■■■■ 5.47
SMAD5-207ENST00000511116 DNAJC5BQ9UF47 199 aa48.95■■■■■ 5.43
SMAD5-207ENST00000511116 DCAF8L2P0C7V8 631 aa48.59■■■■■ 5.37
SMAD5-207ENST00000511116 MYO15BQ96JP2 1530 aa48.58■■■■■ 5.37
SMAD5-207ENST00000511116 UNC13AQ9UPW8 1703 aa48.41■■■■■ 5.34
SMAD5-207ENST00000511116 PABPN1Q86U42 306 aaKnown RBP eCLIP48.34■■■■■ 5.33
SMAD5-207ENST00000511116 BICRAQ9NZM4 1560 aa48.14■■■■■ 5.3
SMAD5-207ENST00000511116 ZCCHC6Q5VYS8 1495 aaKnown RBP47.94■■■■■ 5.26
SMAD5-207ENST00000511116 DCAF1Q9Y4B6 1507 aa47.88■■■■■ 5.26
SMAD5-207ENST00000511116 SHROOM4Q9ULL8 1493 aa47.55■■■■■ 5.2
SMAD5-207ENST00000511116 SCRIBQ14160 1630 aa47.24■■■■■ 5.15
SMAD5-207ENST00000511116 CC2D2AQ9P2K1 1620 aa47.02■■■■■ 5.12
SMAD5-207ENST00000511116 EIF4G1Q04637 1599 aaKnown RBP46.92■■■■■ 5.1
SMAD5-207ENST00000511116 CECR2Q9BXF3 1484 aa46.9■■■■■ 5.1
SMAD5-207ENST00000511116 NCAPD3P42695 1498 aa45.43■■■■■ 4.86
SMAD5-207ENST00000511116 ATAD2BQ9ULI0 1458 aa45.23■■■■■ 4.83
SMAD5-207ENST00000511116 SMARCA4P51532 1647 aa45.14■■■■■ 4.82
SMAD5-207ENST00000511116 SMARCA2P51531 1590 aa45.1■■■■■ 4.81
SMAD5-207ENST00000511116 HMGXB3Q12766 1538 aa45.09■■■■■ 4.81
SMAD5-207ENST00000511116 DNAJC5Q9H3Z4 198 aa45.07■■■■■ 4.81
SMAD5-207ENST00000511116 CUX2O14529 1486 aa44.98■■■■■ 4.79
SMAD5-207ENST00000511116 BAZ1AQ9NRL2 1556 aaPredicted RBP44.9■■■■■ 4.78
SMAD5-207ENST00000511116 ERCC6Q03468 1493 aa44.88■■■■■ 4.78
SMAD5-207ENST00000511116 PEG3Q9GZU2 1588 aa44.81■■■■■ 4.76
SMAD5-207ENST00000511116 BAZ1BQ9UIG0 1483 aaKnown RBP44.73■■■■■ 4.75
SMAD5-207ENST00000511116 NESP48681 1621 aa44.65■■■■■ 4.74
SMAD5-207ENST00000511116 MROH2BQ7Z745 1585 aa44.54■■■■■ 4.72
SMAD5-207ENST00000511116 LAMC3Q9Y6N6 1575 aa44.39■■■■■ 4.7
SMAD5-207ENST00000511116 THOC2Q8NI27 1593 aaKnown RBP44.31■■■■■ 4.68
SMAD5-207ENST00000511116 PDS5BQ9NTI5 1447 aa44.1■■■■■ 4.65
SMAD5-207ENST00000511116 KIF21AQ7Z4S6 1674 aa44.09■■■■■ 4.65
SMAD5-207ENST00000511116 CADPSQ9ULU8 1353 aa43.99■■■■■ 4.63
SMAD5-207ENST00000511116 WIZO95785 1651 aa43.96■■■■■ 4.63
SMAD5-207ENST00000511116 MRC2Q9UBG0 1479 aa43.74■■■■■ 4.59
SMAD5-207ENST00000511116 WDR62O43379 1518 aa43.68■■■■■ 4.58
SMAD5-207ENST00000511116 RSF1Q96T23 1441 aaPredicted RBP43.58■■■■■ 4.57
SMAD5-207ENST00000511116 CEP164Q9UPV0 1460 aa43.51■■■■■ 4.56
SMAD5-207ENST00000511116 CFTRP13569 1480 aa43.51■■■■■ 4.56
SMAD5-207ENST00000511116 FANCD2Q9BXW9 1451 aa43.46■■■■■ 4.55
SMAD5-207ENST00000511116 TOP2AP11388 1531 aaKnown RBP43.46■■■■■ 4.55
SMAD5-207ENST00000511116 URB2Q14146 1524 aaKnown RBP43.15■■■■■ 4.5
SMAD5-207ENST00000511116 PRDM2Q13029 1718 aa43.02■■■■■ 4.48
SMAD5-207ENST00000511116 CCDC88BA6NC98 1476 aa42.94■■■■■ 4.46
SMAD5-207ENST00000511116 TRIM41Q8WV44 630 aa42.84■■■■■ 4.45
SMAD5-207ENST00000511116 OSCARQ8IYS5 282 aa42.8■■■■■ 4.44
SMAD5-207ENST00000511116 IFT140Q96RY7 1462 aa42.68■■■■■ 4.42
SMAD5-207ENST00000511116 TOPBP1Q92547 1522 aa42.65■■■■■ 4.42
SMAD5-207ENST00000511116 ZNF608Q9ULD9 1512 aaPredicted RBP42.61■■■■■ 4.41
SMAD5-207ENST00000511116 ABCC8Q09428 1581 aa42.56■■■■■ 4.4
SMAD5-207ENST00000511116 DNMBPQ6XZF7 1577 aa42.48■■■■■ 4.39
SMAD5-207ENST00000511116 EIF4G3O43432 1585 aaKnown RBP42.37■■■■■ 4.37
SMAD5-207ENST00000511116 TARBP1Q13395 1621 aaKnown RBP42.31■■■■■ 4.36
SMAD5-207ENST00000511116 RIMBP3CA6NJZ7 1639 aa42.31■■■■■ 4.36
SMAD5-207ENST00000511116 RIMBP3BA6NNM3 1639 aa42.31■■■■■ 4.36
SMAD5-207ENST00000511116 RIMBP3Q9UFD9 1639 aa42.31■■■■■ 4.36
SMAD5-207ENST00000511116 POLA1P09884 1462 aaPredicted RBP42.21■■■■■ 4.35
SMAD5-207ENST00000511116 ARHGEF11O15085 1522 aa42.18■■■■■ 4.34
SMAD5-207ENST00000511116 AQRO60306 1485 aaKnown RBP eCLIP42.17■■■■■ 4.34
SMAD5-207ENST00000511116 CHD1O14646 1710 aa42.05■■■■■ 4.32
SMAD5-207ENST00000511116 RAD54L2Q9Y4B4 1467 aa42■■■■■ 4.31
SMAD5-207ENST00000511116 SOGA1O94964 1423 aa41.96■■■■■ 4.31
SMAD5-207ENST00000511116 WDR97A6NE52 1622 aa41.92■■■■■ 4.3
SMAD5-207ENST00000511116 FGD5Q6ZNL6 1462 aa41.89■■■■■ 4.3
SMAD5-207ENST00000511116 TDRD9Q8NDG6 1382 aaKnown RBP41.88■■■■■ 4.29
SMAD5-207ENST00000511116 CUX1P39880 1505 aa41.86■■■■■ 4.29
SMAD5-207ENST00000511116 FBLN2P98095 1184 aa41.78■■■■■ 4.28
SMAD5-207ENST00000511116 ARAP1Q96P48 1450 aa41.76■■■■■ 4.28
SMAD5-207ENST00000511116 SNAPC4Q5SXM2 1469 aa41.75■■■■■ 4.27
SMAD5-207ENST00000511116 CYB5RLQ6IPT4 315 aa41.75■■■■■ 4.27
SMAD5-207ENST00000511116 MAGI1Q96QZ7 1491 aaPredicted RBP41.7■■■■■ 4.27
SMAD5-207ENST00000511116 CLASP1Q7Z460 1538 aa41.66■■■■■ 4.26
SMAD5-207ENST00000511116 GRIN2BQ13224 1484 aa41.66■■■■■ 4.26
SMAD5-207ENST00000511116 SYNJ1O43426 1573 aa41.55■■■■■ 4.24
SMAD5-207ENST00000511116 SYNJ2O15056 1496 aa41.54■■■■■ 4.24
SMAD5-207ENST00000511116 CHMP7Q8WUX9 453 aaPredicted RBP41.53■■■■■ 4.24
SMAD5-207ENST00000511116 ABCA10Q8WWZ4 1543 aa41.48■■■■■ 4.23
SMAD5-207ENST00000511116 GAPVD1Q14C86 1478 aa41.47■■■■■ 4.23
SMAD5-207ENST00000511116 PBRM1Q86U86 1689 aa41.45■■■■■ 4.23
SMAD5-207ENST00000511116 ABCA5Q8WWZ7 1642 aa41.42■■■■■ 4.22
SMAD5-207ENST00000511116 SUPT5HO00267 1087 aaKnown RBP41.33■■■■■ 4.21
SMAD5-207ENST00000511116 TRHP20396 242 aaPredicted RBP41.26■■■■■ 4.2
SMAD5-207ENST00000511116 WRNQ14191 1432 aaPredicted RBP eCLIP41.22■■■■■ 4.19
SMAD5-207ENST00000511116 BIVM-ERCC5R4GMW8 1640 aa41.18■■■■■ 4.18
SMAD5-207ENST00000511116 TOP2BQ02880 1626 aa41.17■■■■■ 4.18
SMAD5-207ENST00000511116 GRIN2AQ12879 1464 aa41.13■■■■■ 4.17
SMAD5-207ENST00000511116 ADAMTS12P58397 1594 aa41.09■■■■■ 4.17
SMAD5-207ENST00000511116 NUP160Q12769 1436 aa41.04■■■■■ 4.16
SMAD5-207ENST00000511116 CEP170Q5SW79 1584 aa40.99■■■■■ 4.15
SMAD5-207ENST00000511116 FHAD1B1AJZ9 1412 aa40.96■■■■■ 4.15
SMAD5-207ENST00000511116 ERICH3Q5RHP9 1530 aa40.94■■■■■ 4.14
SMAD5-207ENST00000511116 ERCC6L2Q5T890 1561 aa40.93■■■■■ 4.14
SMAD5-207ENST00000511116 SHROOM2Q13796 1616 aa40.89■■■■■ 4.14
SMAD5-207ENST00000511116 PRG4Q92954 1404 aaPredicted RBP40.57■■■■■ 4.08
SMAD5-207ENST00000511116 RUSC2Q8N2Y8 1516 aa40.52■■■■■ 4.08
SMAD5-207ENST00000511116 JPH4Q96JJ6 628 aa40.52■■■■■ 4.08
SMAD5-207ENST00000511116 IGF1RP08069 1367 aa40.36■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms