RNA–Protein interactions for RNA: ENST00000511097.6

CAST-235, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-235ENST00000511097 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
CAST-235ENST00000511097 CCDC180Q9P1Z9 1646 aa37.05■■■■□ 3.52
CAST-235ENST00000511097 ABCC9O60706 1549 aa36.31■■■■□ 3.4
CAST-235ENST00000511097 RB1CC1Q8TDY2 1594 aa34.94■■■■□ 3.18
CAST-235ENST00000511097 NACADO15069 1562 aa34.91■■■■□ 3.18
CAST-235ENST00000511097 MYO15BQ96JP2 1530 aa34.75■■■■□ 3.15
CAST-235ENST00000511097 DCAF8L2P0C7V8 631 aa34.74■■■■□ 3.15
CAST-235ENST00000511097 ZCCHC6Q5VYS8 1495 aaKnown RBP34.67■■■■□ 3.14
CAST-235ENST00000511097 DCAF1Q9Y4B6 1507 aa34.52■■■■□ 3.12
CAST-235ENST00000511097 UNC13AQ9UPW8 1703 aa33.99■■■■□ 3.03
CAST-235ENST00000511097 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
CAST-235ENST00000511097 BICRAQ9NZM4 1560 aa33.85■■■■□ 3.01
CAST-235ENST00000511097 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
CAST-235ENST00000511097 SHROOM4Q9ULL8 1493 aa33.65■■■□□ 2.98
CAST-235ENST00000511097 DNAJC5BQ9UF47 199 aa33.43■■■□□ 2.94
CAST-235ENST00000511097 EIF4G1Q04637 1599 aaKnown RBP32.99■■■□□ 2.87
CAST-235ENST00000511097 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
CAST-235ENST00000511097 CECR2Q9BXF3 1484 aa32.69■■■□□ 2.82
CAST-235ENST00000511097 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
CAST-235ENST00000511097 SMARCA4P51532 1647 aa32.3■■■□□ 2.76
CAST-235ENST00000511097 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
CAST-235ENST00000511097 ATAD2BQ9ULI0 1458 aa32.2■■■□□ 2.74
CAST-235ENST00000511097 SMARCA2P51531 1590 aa32.17■■■□□ 2.74
CAST-235ENST00000511097 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
CAST-235ENST00000511097 HMGXB3Q12766 1538 aa32.05■■■□□ 2.72
CAST-235ENST00000511097 MROH2BQ7Z745 1585 aa32.05■■■□□ 2.72
CAST-235ENST00000511097 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
CAST-235ENST00000511097 RSF1Q96T23 1441 aaPredicted RBP31.68■■■□□ 2.66
CAST-235ENST00000511097 WIZO95785 1651 aa31.64■■■□□ 2.65
CAST-235ENST00000511097 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
CAST-235ENST00000511097 NESP48681 1621 aa31.37■■■□□ 2.61
CAST-235ENST00000511097 LAMC3Q9Y6N6 1575 aa31.36■■■□□ 2.61
CAST-235ENST00000511097 ERCC6Q03468 1493 aa31.34■■■□□ 2.61
CAST-235ENST00000511097 CADPSQ9ULU8 1353 aa31.28■■■□□ 2.6
CAST-235ENST00000511097 PDS5BQ9NTI5 1447 aa31.2■■■□□ 2.58
CAST-235ENST00000511097 CUX2O14529 1486 aa31.11■■■□□ 2.57
CAST-235ENST00000511097 CFTRP13569 1480 aa31.07■■■□□ 2.56
CAST-235ENST00000511097 CCDC88BA6NC98 1476 aa31■■■□□ 2.55
CAST-235ENST00000511097 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
CAST-235ENST00000511097 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.55
CAST-235ENST00000511097 FANCD2Q9BXW9 1451 aa30.88■■■□□ 2.53
CAST-235ENST00000511097 CEP164Q9UPV0 1460 aa30.86■■■□□ 2.53
CAST-235ENST00000511097 MRC2Q9UBG0 1479 aa30.84■■■□□ 2.53
CAST-235ENST00000511097 WDR62O43379 1518 aa30.74■■■□□ 2.51
CAST-235ENST00000511097 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
CAST-235ENST00000511097 PRDM2Q13029 1718 aa30.68■■■□□ 2.5
CAST-235ENST00000511097 URB2Q14146 1524 aaKnown RBP30.55■■■□□ 2.48
CAST-235ENST00000511097 ABCC8Q09428 1581 aa30.43■■■□□ 2.46
CAST-235ENST00000511097 TOPBP1Q92547 1522 aa30.36■■■□□ 2.45
CAST-235ENST00000511097 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
CAST-235ENST00000511097 DNAJC5Q9H3Z4 198 aa30.28■■■□□ 2.44
CAST-235ENST00000511097 IFT140Q96RY7 1462 aa30.24■■■□□ 2.43
CAST-235ENST00000511097 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
CAST-235ENST00000511097 CUX1P39880 1505 aa30.07■■■□□ 2.4
CAST-235ENST00000511097 ZNF608Q9ULD9 1512 aaPredicted RBP30.04■■■□□ 2.4
CAST-235ENST00000511097 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
CAST-235ENST00000511097 FGD5Q6ZNL6 1462 aa30■■■□□ 2.39
CAST-235ENST00000511097 SOGA1O94964 1423 aa29.98■■■□□ 2.39
CAST-235ENST00000511097 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
CAST-235ENST00000511097 EIF4G3O43432 1585 aaKnown RBP29.91■■■□□ 2.38
CAST-235ENST00000511097 WRNQ14191 1432 aaPredicted RBP eCLIP29.88■■■□□ 2.37
CAST-235ENST00000511097 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
CAST-235ENST00000511097 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.372e-6■■■■□ 24.3
CAST-235ENST00000511097 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
CAST-235ENST00000511097 TDRD9Q8NDG6 1382 aaKnown RBP29.8■■■□□ 2.36
CAST-235ENST00000511097 TOP2BQ02880 1626 aa29.8■■■□□ 2.36
CAST-235ENST00000511097 BIVM-ERCC5R4GMW8 1640 aa29.78■■■□□ 2.36
CAST-235ENST00000511097 ABCA10Q8WWZ4 1543 aa29.75■■■□□ 2.35
CAST-235ENST00000511097 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
CAST-235ENST00000511097 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
CAST-235ENST00000511097 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
CAST-235ENST00000511097 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
CAST-235ENST00000511097 SNAPC4Q5SXM2 1469 aa29.6■■■□□ 2.33
CAST-235ENST00000511097 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
CAST-235ENST00000511097 FBLN2P98095 1184 aa29.52■■■□□ 2.32
CAST-235ENST00000511097 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
CAST-235ENST00000511097 CHD1O14646 1710 aa29.48■■■□□ 2.31
CAST-235ENST00000511097 CHMP7Q8WUX9 453 aaPredicted RBP29.48■■■□□ 2.31
CAST-235ENST00000511097 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
CAST-235ENST00000511097 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
CAST-235ENST00000511097 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
CAST-235ENST00000511097 ADAMTS12P58397 1594 aa29.31■■■□□ 2.28
CAST-235ENST00000511097 KIF27Q86VH2 1401 aa29.29■■■□□ 2.28
CAST-235ENST00000511097 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
CAST-235ENST00000511097 GRIN2AQ12879 1464 aa29.27■■■□□ 2.28
CAST-235ENST00000511097 ARHGEF11O15085 1522 aa29.27■■■□□ 2.28
CAST-235ENST00000511097 RIMBP3CA6NJZ7 1639 aa29.23■■■□□ 2.27
CAST-235ENST00000511097 RIMBP3BA6NNM3 1639 aa29.23■■■□□ 2.27
CAST-235ENST00000511097 RIMBP3Q9UFD9 1639 aa29.23■■■□□ 2.27
CAST-235ENST00000511097 NUP160Q12769 1436 aa29.18■■■□□ 2.26
CAST-235ENST00000511097 IGF1RP08069 1367 aa29.17■■■□□ 2.26
CAST-235ENST00000511097 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
CAST-235ENST00000511097 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
CAST-235ENST00000511097 CUL7Q14999 1698 aa29.07■■■□□ 2.24
CAST-235ENST00000511097 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
CAST-235ENST00000511097 CARMIL1Q5VZK9 1371 aa28.99■■■□□ 2.23
CAST-235ENST00000511097 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
CAST-235ENST00000511097 SHROOM2Q13796 1616 aa28.92■■■□□ 2.22
CAST-235ENST00000511097 RUSC2Q8N2Y8 1516 aa28.89■■■□□ 2.21
CAST-235ENST00000511097 KIAA0586Q9BVV6 1533 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms