RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 NISCHQ9Y2I1 1504 aa38.01■■■■□ 3.67
SH3TC1-220ENST00000511002 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
SH3TC1-220ENST00000511002 ABCC9O60706 1549 aa33.44■■■□□ 2.94
SH3TC1-220ENST00000511002 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
SH3TC1-220ENST00000511002 NACADO15069 1562 aa31.86■■■□□ 2.69
SH3TC1-220ENST00000511002 DCAF8L2P0C7V8 631 aa31.84■■■□□ 2.69
SH3TC1-220ENST00000511002 ZCCHC6Q5VYS8 1495 aaKnown RBP31.63■■■□□ 2.65
SH3TC1-220ENST00000511002 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
SH3TC1-220ENST00000511002 DCAF1Q9Y4B6 1507 aa31.37■■■□□ 2.61
SH3TC1-220ENST00000511002 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
SH3TC1-220ENST00000511002 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
SH3TC1-220ENST00000511002 BICRAQ9NZM4 1560 aa31.12■■■□□ 2.57
SH3TC1-220ENST00000511002 DNAJC5BQ9UF47 199 aa30.97■■■□□ 2.55
SH3TC1-220ENST00000511002 SCRIBQ14160 1630 aa30.96■■■□□ 2.55
SH3TC1-220ENST00000511002 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
SH3TC1-220ENST00000511002 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
SH3TC1-220ENST00000511002 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
SH3TC1-220ENST00000511002 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
SH3TC1-220ENST00000511002 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
SH3TC1-220ENST00000511002 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
SH3TC1-220ENST00000511002 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
SH3TC1-220ENST00000511002 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
SH3TC1-220ENST00000511002 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
SH3TC1-220ENST00000511002 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
SH3TC1-220ENST00000511002 HMGXB3Q12766 1538 aa29.26■■■□□ 2.27
SH3TC1-220ENST00000511002 PEG3Q9GZU2 1588 aa29.23■■■□□ 2.27
SH3TC1-220ENST00000511002 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
SH3TC1-220ENST00000511002 WIZO95785 1651 aa29.02■■■□□ 2.24
SH3TC1-220ENST00000511002 NESP48681 1621 aa28.91■■■□□ 2.22
SH3TC1-220ENST00000511002 RSF1Q96T23 1441 aaPredicted RBP28.89■■■□□ 2.22
SH3TC1-220ENST00000511002 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
SH3TC1-220ENST00000511002 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
SH3TC1-220ENST00000511002 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
SH3TC1-220ENST00000511002 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
SH3TC1-220ENST00000511002 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
SH3TC1-220ENST00000511002 CUX2O14529 1486 aa28.52■■■□□ 2.16
SH3TC1-220ENST00000511002 THOC2Q8NI27 1593 aaKnown RBP28.48■■■□□ 2.15
SH3TC1-220ENST00000511002 PDS5BQ9NTI5 1447 aa28.45■■■□□ 2.15
SH3TC1-220ENST00000511002 CFTRP13569 1480 aa28.35■■■□□ 2.13
SH3TC1-220ENST00000511002 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.13
SH3TC1-220ENST00000511002 FANCD2Q9BXW9 1451 aa28.26■■■□□ 2.11
SH3TC1-220ENST00000511002 MRC2Q9UBG0 1479 aa28.24■■■□□ 2.11
SH3TC1-220ENST00000511002 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
SH3TC1-220ENST00000511002 WDR62O43379 1518 aa28.17■■■□□ 2.1
SH3TC1-220ENST00000511002 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
SH3TC1-220ENST00000511002 URB2Q14146 1524 aaKnown RBP28.04■■■□□ 2.08
SH3TC1-220ENST00000511002 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
SH3TC1-220ENST00000511002 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
SH3TC1-220ENST00000511002 TOPBP1Q92547 1522 aa27.8■■■□□ 2.04
SH3TC1-220ENST00000511002 DNMBPQ6XZF7 1577 aa27.72■■■□□ 2.03
SH3TC1-220ENST00000511002 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
SH3TC1-220ENST00000511002 IFT140Q96RY7 1462 aa27.63■■■□□ 2.01
SH3TC1-220ENST00000511002 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
SH3TC1-220ENST00000511002 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
SH3TC1-220ENST00000511002 CUX1P39880 1505 aa27.53■■■□□ 2
SH3TC1-220ENST00000511002 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
SH3TC1-220ENST00000511002 RAD54L2Q9Y4B4 1467 aa27.47■■□□□ 1.99
SH3TC1-220ENST00000511002 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
SH3TC1-220ENST00000511002 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
SH3TC1-220ENST00000511002 AQRO60306 1485 aaKnown RBP eCLIP27.41■■□□□ 1.989e-7■■■■■ 31.4
SH3TC1-220ENST00000511002 SOGA1O94964 1423 aa27.4■■□□□ 1.98
SH3TC1-220ENST00000511002 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
SH3TC1-220ENST00000511002 OSCARQ8IYS5 282 aa27.28■■□□□ 1.96
SH3TC1-220ENST00000511002 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
SH3TC1-220ENST00000511002 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
SH3TC1-220ENST00000511002 WRNQ14191 1432 aaPredicted RBP eCLIP27.21■■□□□ 1.95
SH3TC1-220ENST00000511002 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
SH3TC1-220ENST00000511002 CHD1O14646 1710 aa27.19■■□□□ 1.94
SH3TC1-220ENST00000511002 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
SH3TC1-220ENST00000511002 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
SH3TC1-220ENST00000511002 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
SH3TC1-220ENST00000511002 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
SH3TC1-220ENST00000511002 GRIN2BQ13224 1484 aa27.09■■□□□ 1.93
SH3TC1-220ENST00000511002 FBLN2P98095 1184 aa27.08■■□□□ 1.93
SH3TC1-220ENST00000511002 PBRM1Q86U86 1689 aa27.08■■□□□ 1.92
SH3TC1-220ENST00000511002 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
SH3TC1-220ENST00000511002 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
SH3TC1-220ENST00000511002 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
SH3TC1-220ENST00000511002 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
SH3TC1-220ENST00000511002 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
SH3TC1-220ENST00000511002 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
SH3TC1-220ENST00000511002 SYNJ2O15056 1496 aa26.94■■□□□ 1.9
SH3TC1-220ENST00000511002 CHMP7Q8WUX9 453 aaPredicted RBP26.93■■□□□ 1.9
SH3TC1-220ENST00000511002 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
SH3TC1-220ENST00000511002 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
SH3TC1-220ENST00000511002 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
SH3TC1-220ENST00000511002 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
SH3TC1-220ENST00000511002 GRIN2AQ12879 1464 aa26.77■■□□□ 1.88
SH3TC1-220ENST00000511002 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
SH3TC1-220ENST00000511002 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
SH3TC1-220ENST00000511002 CEP170Q5SW79 1584 aa26.7■■□□□ 1.86
SH3TC1-220ENST00000511002 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
SH3TC1-220ENST00000511002 NUP160Q12769 1436 aa26.66■■□□□ 1.86
SH3TC1-220ENST00000511002 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
SH3TC1-220ENST00000511002 IGF1RP08069 1367 aa26.59■■□□□ 1.85
SH3TC1-220ENST00000511002 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
SH3TC1-220ENST00000511002 CUL7Q14999 1698 aa26.5■■□□□ 1.83
SH3TC1-220ENST00000511002 SHROOM2Q13796 1616 aa26.5■■□□□ 1.83
SH3TC1-220ENST00000511002 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
SH3TC1-220ENST00000511002 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms