RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
PDGFC-206ENST00000510982 ABCC9O60706 1549 aa19.26■□□□□ 0.67
PDGFC-206ENST00000510982 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
PDGFC-206ENST00000510982 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
PDGFC-206ENST00000510982 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PDGFC-206ENST00000510982 NACADO15069 1562 aa18.18■□□□□ 0.5
PDGFC-206ENST00000510982 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
PDGFC-206ENST00000510982 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
PDGFC-206ENST00000510982 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
PDGFC-206ENST00000510982 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
PDGFC-206ENST00000510982 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
PDGFC-206ENST00000510982 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
PDGFC-206ENST00000510982 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
PDGFC-206ENST00000510982 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
PDGFC-206ENST00000510982 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
PDGFC-206ENST00000510982 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
PDGFC-206ENST00000510982 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
PDGFC-206ENST00000510982 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
PDGFC-206ENST00000510982 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
PDGFC-206ENST00000510982 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.28
PDGFC-206ENST00000510982 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
PDGFC-206ENST00000510982 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
PDGFC-206ENST00000510982 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
PDGFC-206ENST00000510982 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
PDGFC-206ENST00000510982 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
PDGFC-206ENST00000510982 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
PDGFC-206ENST00000510982 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
PDGFC-206ENST00000510982 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
PDGFC-206ENST00000510982 NESP48681 1621 aa16.55■□□□□ 0.24
PDGFC-206ENST00000510982 CUX2O14529 1486 aa16.54■□□□□ 0.24
PDGFC-206ENST00000510982 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
PDGFC-206ENST00000510982 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
PDGFC-206ENST00000510982 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
PDGFC-206ENST00000510982 WIZO95785 1651 aa16.34■□□□□ 0.21
PDGFC-206ENST00000510982 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
PDGFC-206ENST00000510982 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
PDGFC-206ENST00000510982 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.19
PDGFC-206ENST00000510982 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
PDGFC-206ENST00000510982 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
PDGFC-206ENST00000510982 CFTRP13569 1480 aa16.12■□□□□ 0.17
PDGFC-206ENST00000510982 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
PDGFC-206ENST00000510982 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
PDGFC-206ENST00000510982 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
PDGFC-206ENST00000510982 WDR62O43379 1518 aa16.1■□□□□ 0.17
PDGFC-206ENST00000510982 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
PDGFC-206ENST00000510982 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
PDGFC-206ENST00000510982 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
PDGFC-206ENST00000510982 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
PDGFC-206ENST00000510982 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
PDGFC-206ENST00000510982 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
PDGFC-206ENST00000510982 TOPBP1Q92547 1522 aa15.81■□□□□ 0.12
PDGFC-206ENST00000510982 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
PDGFC-206ENST00000510982 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
PDGFC-206ENST00000510982 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
PDGFC-206ENST00000510982 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
PDGFC-206ENST00000510982 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDGFC-206ENST00000510982 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
PDGFC-206ENST00000510982 FBLN2P98095 1184 aa15.66■□□□□ 0.1
PDGFC-206ENST00000510982 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
PDGFC-206ENST00000510982 SOGA1O94964 1423 aa15.64■□□□□ 0.09
PDGFC-206ENST00000510982 EIF4G3O43432 1585 aaKnown RBP15.63■□□□□ 0.09
PDGFC-206ENST00000510982 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
PDGFC-206ENST00000510982 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
PDGFC-206ENST00000510982 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
PDGFC-206ENST00000510982 RIMBP3CA6NJZ7 1639 aa15.58■□□□□ 0.09
PDGFC-206ENST00000510982 RIMBP3BA6NNM3 1639 aa15.58■□□□□ 0.09
PDGFC-206ENST00000510982 RIMBP3Q9UFD9 1639 aa15.58■□□□□ 0.09
PDGFC-206ENST00000510982 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
PDGFC-206ENST00000510982 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
PDGFC-206ENST00000510982 ARHGEF11O15085 1522 aa15.55■□□□□ 0.08
PDGFC-206ENST00000510982 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
PDGFC-206ENST00000510982 CUX1P39880 1505 aa15.53■□□□□ 0.08
PDGFC-206ENST00000510982 CHD1O14646 1710 aa15.52■□□□□ 0.08
PDGFC-206ENST00000510982 SNAPC4Q5SXM2 1469 aa15.48■□□□□ 0.07
PDGFC-206ENST00000510982 GRIN2BQ13224 1484 aa15.46■□□□□ 0.06
PDGFC-206ENST00000510982 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
PDGFC-206ENST00000510982 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
PDGFC-206ENST00000510982 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
PDGFC-206ENST00000510982 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
PDGFC-206ENST00000510982 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
PDGFC-206ENST00000510982 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
PDGFC-206ENST00000510982 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
PDGFC-206ENST00000510982 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
PDGFC-206ENST00000510982 WRNQ14191 1432 aaPredicted RBP eCLIP15.36■□□□□ 0.05
PDGFC-206ENST00000510982 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
PDGFC-206ENST00000510982 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
PDGFC-206ENST00000510982 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
PDGFC-206ENST00000510982 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
PDGFC-206ENST00000510982 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
PDGFC-206ENST00000510982 GRIN2AQ12879 1464 aa15.24■□□□□ 0.03
PDGFC-206ENST00000510982 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
PDGFC-206ENST00000510982 NUP160Q12769 1436 aa15.18■□□□□ 0.02
PDGFC-206ENST00000510982 ADAMTS12P58397 1594 aa15.18■□□□□ 0.02
PDGFC-206ENST00000510982 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
PDGFC-206ENST00000510982 CEP170Q5SW79 1584 aa15.15■□□□□ 0.02
PDGFC-206ENST00000510982 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
PDGFC-206ENST00000510982 ERCC6L2Q5T890 1561 aa15.14■□□□□ 0.01
PDGFC-206ENST00000510982 CHIC1Q5VXU3 224 aa15.13■□□□□ 0.01
PDGFC-206ENST00000510982 PRG4Q92954 1404 aaPredicted RBP15.09■□□□□ 0.01
PDGFC-206ENST00000510982 IGF1RP08069 1367 aa15.07■□□□□ 0
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