RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.25
BRIX1-203ENST00000510834 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
BRIX1-203ENST00000510834 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.69
BRIX1-203ENST00000510834 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
BRIX1-203ENST00000510834 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
BRIX1-203ENST00000510834 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
BRIX1-203ENST00000510834 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
BRIX1-203ENST00000510834 ABCC9O60706 1549 aa18.35■□□□□ 0.53
BRIX1-203ENST00000510834 NACADO15069 1562 aa18.35■□□□□ 0.53
BRIX1-203ENST00000510834 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
BRIX1-203ENST00000510834 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
BRIX1-203ENST00000510834 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
BRIX1-203ENST00000510834 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
BRIX1-203ENST00000510834 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
BRIX1-203ENST00000510834 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
BRIX1-203ENST00000510834 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
BRIX1-203ENST00000510834 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
BRIX1-203ENST00000510834 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
BRIX1-203ENST00000510834 WIZO95785 1651 aa17.62■□□□□ 0.41
BRIX1-203ENST00000510834 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
BRIX1-203ENST00000510834 SMARCA4P51532 1647 aa17.56■□□□□ 0.4
BRIX1-203ENST00000510834 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
BRIX1-203ENST00000510834 EIF4G1Q04637 1599 aaKnown RBP17.35■□□□□ 0.37
BRIX1-203ENST00000510834 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
BRIX1-203ENST00000510834 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
BRIX1-203ENST00000510834 SMARCA2P51531 1590 aa17.29■□□□□ 0.36
BRIX1-203ENST00000510834 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
BRIX1-203ENST00000510834 TRIM41Q8WV44 630 aa17.21■□□□□ 0.34
BRIX1-203ENST00000510834 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
BRIX1-203ENST00000510834 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
BRIX1-203ENST00000510834 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
BRIX1-203ENST00000510834 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
BRIX1-203ENST00000510834 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
BRIX1-203ENST00000510834 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
BRIX1-203ENST00000510834 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
BRIX1-203ENST00000510834 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
BRIX1-203ENST00000510834 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
BRIX1-203ENST00000510834 EEA1Q15075 1411 aa16.8■□□□□ 0.28
BRIX1-203ENST00000510834 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
BRIX1-203ENST00000510834 SOGA1O94964 1423 aa16.73■□□□□ 0.27
BRIX1-203ENST00000510834 AEBP2Q6ZN18 517 aaPredicted RBP16.71■□□□□ 0.26
BRIX1-203ENST00000510834 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.26
BRIX1-203ENST00000510834 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
BRIX1-203ENST00000510834 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
BRIX1-203ENST00000510834 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
BRIX1-203ENST00000510834 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
BRIX1-203ENST00000510834 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
BRIX1-203ENST00000510834 CFTRP13569 1480 aa16.64■□□□□ 0.25
BRIX1-203ENST00000510834 KIF21BO75037 1637 aa16.62■□□□□ 0.25
BRIX1-203ENST00000510834 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
BRIX1-203ENST00000510834 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
BRIX1-203ENST00000510834 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
BRIX1-203ENST00000510834 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
BRIX1-203ENST00000510834 HRCP23327 699 aa16.56■□□□□ 0.24
BRIX1-203ENST00000510834 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
BRIX1-203ENST00000510834 CEP162Q5TB80 1403 aa16.54■□□□□ 0.24
BRIX1-203ENST00000510834 CUX1P39880 1505 aa16.54■□□□□ 0.24
BRIX1-203ENST00000510834 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
BRIX1-203ENST00000510834 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
BRIX1-203ENST00000510834 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
BRIX1-203ENST00000510834 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
BRIX1-203ENST00000510834 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
BRIX1-203ENST00000510834 PRXQ9BXM0 1461 aa16.36■□□□□ 0.21
BRIX1-203ENST00000510834 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
BRIX1-203ENST00000510834 CLIP1P30622 1438 aa16.32■□□□□ 0.2
BRIX1-203ENST00000510834 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
BRIX1-203ENST00000510834 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
BRIX1-203ENST00000510834 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
BRIX1-203ENST00000510834 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
BRIX1-203ENST00000510834 NESP48681 1621 aa16.24■□□□□ 0.19
BRIX1-203ENST00000510834 CUX2O14529 1486 aa16.24■□□□□ 0.19
BRIX1-203ENST00000510834 PPARGC1BQ86YN6 1023 aaKnown RBP16.24■□□□□ 0.19
BRIX1-203ENST00000510834 TOPBP1Q92547 1522 aa16.21■□□□□ 0.19
BRIX1-203ENST00000510834 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
BRIX1-203ENST00000510834 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
BRIX1-203ENST00000510834 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
BRIX1-203ENST00000510834 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
BRIX1-203ENST00000510834 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
BRIX1-203ENST00000510834 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
BRIX1-203ENST00000510834 IGF1RP08069 1367 aa16.13■□□□□ 0.17
BRIX1-203ENST00000510834 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
BRIX1-203ENST00000510834 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
BRIX1-203ENST00000510834 CUL7Q14999 1698 aa16.1■□□□□ 0.17
BRIX1-203ENST00000510834 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.17
BRIX1-203ENST00000510834 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
BRIX1-203ENST00000510834 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
BRIX1-203ENST00000510834 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
BRIX1-203ENST00000510834 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
BRIX1-203ENST00000510834 RANGAP1P46060 587 aaPredicted RBP16.03■□□□□ 0.16
BRIX1-203ENST00000510834 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.16
BRIX1-203ENST00000510834 APLP2Q06481 763 aa16.02■□□□□ 0.15
BRIX1-203ENST00000510834 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
BRIX1-203ENST00000510834 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
BRIX1-203ENST00000510834 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
BRIX1-203ENST00000510834 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
BRIX1-203ENST00000510834 MRC2Q9UBG0 1479 aa15.92■□□□□ 0.14
BRIX1-203ENST00000510834 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
BRIX1-203ENST00000510834 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
BRIX1-203ENST00000510834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
BRIX1-203ENST00000510834 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms