RNA–Protein interactions for RNA: ENST00000510817.1

TMEM173-208, Transcript of transmembrane protein 173, humanhuman

TSL 2

Gene TMEM173, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-208ENST00000510817 NISCHQ9Y2I1 1504 aa35.09■■■■□ 3.21
TMEM173-208ENST00000510817 ABCC9O60706 1549 aa32.04■■■□□ 2.72
TMEM173-208ENST00000510817 CCDC180Q9P1Z9 1646 aa31.65■■■□□ 2.66
TMEM173-208ENST00000510817 DNAJC5BQ9UF47 199 aa30.59■■■□□ 2.49
TMEM173-208ENST00000510817 RB1CC1Q8TDY2 1594 aa30.33■■■□□ 2.45
TMEM173-208ENST00000510817 NACADO15069 1562 aa30.07■■■□□ 2.4
TMEM173-208ENST00000510817 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.35
TMEM173-208ENST00000510817 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
TMEM173-208ENST00000510817 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
TMEM173-208ENST00000510817 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
TMEM173-208ENST00000510817 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
TMEM173-208ENST00000510817 SHROOM4Q9ULL8 1493 aa29.12■■■□□ 2.25
TMEM173-208ENST00000510817 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
TMEM173-208ENST00000510817 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
TMEM173-208ENST00000510817 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
TMEM173-208ENST00000510817 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
TMEM173-208ENST00000510817 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
TMEM173-208ENST00000510817 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
TMEM173-208ENST00000510817 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
TMEM173-208ENST00000510817 CUX2O14529 1486 aa27.89■■■□□ 2.05
TMEM173-208ENST00000510817 NCAPD3P42695 1498 aa27.83■■■□□ 2.04
TMEM173-208ENST00000510817 ERCC6Q03468 1493 aa27.65■■■□□ 2.02
TMEM173-208ENST00000510817 ATAD2BQ9ULI0 1458 aa27.62■■■□□ 2.01
TMEM173-208ENST00000510817 HMGXB3Q12766 1538 aa27.51■■■□□ 2
TMEM173-208ENST00000510817 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
TMEM173-208ENST00000510817 NESP48681 1621 aa27.42■■□□□ 1.98
TMEM173-208ENST00000510817 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
TMEM173-208ENST00000510817 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.95
TMEM173-208ENST00000510817 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
TMEM173-208ENST00000510817 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
TMEM173-208ENST00000510817 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
TMEM173-208ENST00000510817 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
TMEM173-208ENST00000510817 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
TMEM173-208ENST00000510817 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
TMEM173-208ENST00000510817 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
TMEM173-208ENST00000510817 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
TMEM173-208ENST00000510817 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
TMEM173-208ENST00000510817 WDR62O43379 1518 aa26.8■■□□□ 1.88
TMEM173-208ENST00000510817 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
TMEM173-208ENST00000510817 WIZO95785 1651 aa26.61■■□□□ 1.85
TMEM173-208ENST00000510817 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
TMEM173-208ENST00000510817 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
TMEM173-208ENST00000510817 CFTRP13569 1480 aa26.52■■□□□ 1.84
TMEM173-208ENST00000510817 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
TMEM173-208ENST00000510817 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
TMEM173-208ENST00000510817 RSF1Q96T23 1441 aaPredicted RBP26.31■■□□□ 1.8
TMEM173-208ENST00000510817 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
TMEM173-208ENST00000510817 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
TMEM173-208ENST00000510817 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
TMEM173-208ENST00000510817 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
TMEM173-208ENST00000510817 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
TMEM173-208ENST00000510817 ZNF608Q9ULD9 1512 aaPredicted RBP26.12■■□□□ 1.77
TMEM173-208ENST00000510817 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
TMEM173-208ENST00000510817 ARHGEF11O15085 1522 aa26.08■■□□□ 1.77
TMEM173-208ENST00000510817 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
TMEM173-208ENST00000510817 CCDC88BA6NC98 1476 aa26■■□□□ 1.75
TMEM173-208ENST00000510817 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
TMEM173-208ENST00000510817 EIF4G3O43432 1585 aaKnown RBP25.9■■□□□ 1.74
TMEM173-208ENST00000510817 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
TMEM173-208ENST00000510817 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
TMEM173-208ENST00000510817 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
TMEM173-208ENST00000510817 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.721e-8■■■■■ 34.4
TMEM173-208ENST00000510817 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
TMEM173-208ENST00000510817 CHD1O14646 1710 aa25.77■■□□□ 1.72
TMEM173-208ENST00000510817 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
TMEM173-208ENST00000510817 TRHP20396 242 aaPredicted RBP25.65■■□□□ 1.7
TMEM173-208ENST00000510817 FBLN2P98095 1184 aa25.62■■□□□ 1.69
TMEM173-208ENST00000510817 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
TMEM173-208ENST00000510817 SOGA1O94964 1423 aa25.58■■□□□ 1.69
TMEM173-208ENST00000510817 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
TMEM173-208ENST00000510817 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
TMEM173-208ENST00000510817 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
TMEM173-208ENST00000510817 SNAPC4Q5SXM2 1469 aa25.51■■□□□ 1.67
TMEM173-208ENST00000510817 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
TMEM173-208ENST00000510817 FGD5Q6ZNL6 1462 aa25.46■■□□□ 1.67
TMEM173-208ENST00000510817 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
TMEM173-208ENST00000510817 CHMP7Q8WUX9 453 aaPredicted RBP25.43■■□□□ 1.66
TMEM173-208ENST00000510817 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
TMEM173-208ENST00000510817 CUX1P39880 1505 aa25.39■■□□□ 1.66
TMEM173-208ENST00000510817 SYNJ2O15056 1496 aa25.39■■□□□ 1.65
TMEM173-208ENST00000510817 GAPVD1Q14C86 1478 aa25.28■■□□□ 1.64
TMEM173-208ENST00000510817 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
TMEM173-208ENST00000510817 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
TMEM173-208ENST00000510817 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
TMEM173-208ENST00000510817 ABCA5Q8WWZ7 1642 aa25.18■■□□□ 1.62
TMEM173-208ENST00000510817 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
TMEM173-208ENST00000510817 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
TMEM173-208ENST00000510817 NUP160Q12769 1436 aa25.08■■□□□ 1.61
TMEM173-208ENST00000510817 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
TMEM173-208ENST00000510817 SHROOM2Q13796 1616 aa25■■□□□ 1.59
TMEM173-208ENST00000510817 ADAMTS12P58397 1594 aa24.99■■□□□ 1.59
TMEM173-208ENST00000510817 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
TMEM173-208ENST00000510817 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
TMEM173-208ENST00000510817 KIF13AQ9H1H9 1805 aa24.86■■□□□ 1.57
TMEM173-208ENST00000510817 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
TMEM173-208ENST00000510817 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
TMEM173-208ENST00000510817 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
TMEM173-208ENST00000510817 PRG4Q92954 1404 aaPredicted RBP24.79■■□□□ 1.56
TMEM173-208ENST00000510817 JPH4Q96JJ6 628 aa24.78■■□□□ 1.56
TMEM173-208ENST00000510817 ABCC10Q5T3U5 1492 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms