RNA–Protein interactions for RNA: ENST00000510712.1

HS3ST1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

TSL 2

Gene HS3ST1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-202ENST00000510712 NISCHQ9Y2I1 1504 aa37.06■■■■□ 3.52
HS3ST1-202ENST00000510712 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
HS3ST1-202ENST00000510712 ABCC9O60706 1549 aa32.14■■■□□ 2.74
HS3ST1-202ENST00000510712 NACADO15069 1562 aa30.98■■■□□ 2.55
HS3ST1-202ENST00000510712 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
HS3ST1-202ENST00000510712 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
HS3ST1-202ENST00000510712 ZCCHC6Q5VYS8 1495 aaKnown RBP30.88■■■□□ 2.53
HS3ST1-202ENST00000510712 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
HS3ST1-202ENST00000510712 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
HS3ST1-202ENST00000510712 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
HS3ST1-202ENST00000510712 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
HS3ST1-202ENST00000510712 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
HS3ST1-202ENST00000510712 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
HS3ST1-202ENST00000510712 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
HS3ST1-202ENST00000510712 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
HS3ST1-202ENST00000510712 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
HS3ST1-202ENST00000510712 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
HS3ST1-202ENST00000510712 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
HS3ST1-202ENST00000510712 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
HS3ST1-202ENST00000510712 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
HS3ST1-202ENST00000510712 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
HS3ST1-202ENST00000510712 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
HS3ST1-202ENST00000510712 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
HS3ST1-202ENST00000510712 MROH2BQ7Z745 1585 aa28.53■■■□□ 2.16
HS3ST1-202ENST00000510712 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
HS3ST1-202ENST00000510712 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
HS3ST1-202ENST00000510712 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
HS3ST1-202ENST00000510712 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
HS3ST1-202ENST00000510712 WIZO95785 1651 aa28.17■■■□□ 2.1
HS3ST1-202ENST00000510712 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
HS3ST1-202ENST00000510712 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
HS3ST1-202ENST00000510712 NESP48681 1621 aa27.81■■■□□ 2.04
HS3ST1-202ENST00000510712 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
HS3ST1-202ENST00000510712 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
HS3ST1-202ENST00000510712 PDS5BQ9NTI5 1447 aa27.65■■■□□ 2.02
HS3ST1-202ENST00000510712 CCDC88BA6NC98 1476 aa27.62■■■□□ 2.01
HS3ST1-202ENST00000510712 CFTRP13569 1480 aa27.6■■■□□ 2.01
HS3ST1-202ENST00000510712 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
HS3ST1-202ENST00000510712 CUX2O14529 1486 aa27.47■■□□□ 1.99
HS3ST1-202ENST00000510712 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
HS3ST1-202ENST00000510712 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
HS3ST1-202ENST00000510712 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.97
HS3ST1-202ENST00000510712 CEP164Q9UPV0 1460 aa27.37■■□□□ 1.97
HS3ST1-202ENST00000510712 MRC2Q9UBG0 1479 aa27.33■■□□□ 1.97
HS3ST1-202ENST00000510712 PRDM2Q13029 1718 aa27.28■■□□□ 1.96
HS3ST1-202ENST00000510712 WDR62O43379 1518 aa27.24■■□□□ 1.95
HS3ST1-202ENST00000510712 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
HS3ST1-202ENST00000510712 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
HS3ST1-202ENST00000510712 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
HS3ST1-202ENST00000510712 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
HS3ST1-202ENST00000510712 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
HS3ST1-202ENST00000510712 CUX1P39880 1505 aa26.76■■□□□ 1.87
HS3ST1-202ENST00000510712 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
HS3ST1-202ENST00000510712 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
HS3ST1-202ENST00000510712 TARBP1Q13395 1621 aaKnown RBP26.66■■□□□ 1.86
HS3ST1-202ENST00000510712 SOGA1O94964 1423 aa26.65■■□□□ 1.86
HS3ST1-202ENST00000510712 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
HS3ST1-202ENST00000510712 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
HS3ST1-202ENST00000510712 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
HS3ST1-202ENST00000510712 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
HS3ST1-202ENST00000510712 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
HS3ST1-202ENST00000510712 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
HS3ST1-202ENST00000510712 EIF4G3O43432 1585 aaKnown RBP26.52■■□□□ 1.84
HS3ST1-202ENST00000510712 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
HS3ST1-202ENST00000510712 SYNJ1O43426 1573 aa26.51■■□□□ 1.83
HS3ST1-202ENST00000510712 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.83
HS3ST1-202ENST00000510712 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
HS3ST1-202ENST00000510712 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
HS3ST1-202ENST00000510712 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
HS3ST1-202ENST00000510712 OSCARQ8IYS5 282 aa26.34■■□□□ 1.81
HS3ST1-202ENST00000510712 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
HS3ST1-202ENST00000510712 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
HS3ST1-202ENST00000510712 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
HS3ST1-202ENST00000510712 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
HS3ST1-202ENST00000510712 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
HS3ST1-202ENST00000510712 FBLN2P98095 1184 aa26.18■■□□□ 1.78
HS3ST1-202ENST00000510712 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
HS3ST1-202ENST00000510712 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
HS3ST1-202ENST00000510712 CHD1O14646 1710 aa26.14■■□□□ 1.77
HS3ST1-202ENST00000510712 ERICH3Q5RHP9 1530 aa26.14■■□□□ 1.77
HS3ST1-202ENST00000510712 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
HS3ST1-202ENST00000510712 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
HS3ST1-202ENST00000510712 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
HS3ST1-202ENST00000510712 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
HS3ST1-202ENST00000510712 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
HS3ST1-202ENST00000510712 IGF1RP08069 1367 aa25.99■■□□□ 1.75
HS3ST1-202ENST00000510712 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
HS3ST1-202ENST00000510712 NUP160Q12769 1436 aa25.89■■□□□ 1.74
HS3ST1-202ENST00000510712 CUL7Q14999 1698 aa25.87■■□□□ 1.73
HS3ST1-202ENST00000510712 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
HS3ST1-202ENST00000510712 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
HS3ST1-202ENST00000510712 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
HS3ST1-202ENST00000510712 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
HS3ST1-202ENST00000510712 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
HS3ST1-202ENST00000510712 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
HS3ST1-202ENST00000510712 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
HS3ST1-202ENST00000510712 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
HS3ST1-202ENST00000510712 RAPGEF2Q9Y4G8 1499 aa25.67■■□□□ 1.7
HS3ST1-202ENST00000510712 KIAA0586Q9BVV6 1533 aa25.67■■□□□ 1.7
HS3ST1-202ENST00000510712 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms