RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 NISCHQ9Y2I1 1504 aa54.65■■■■■ 6.34
SPOCK1-209ENST00000510689 CCDC180Q9P1Z9 1646 aa48.9■■■■■ 5.42
SPOCK1-209ENST00000510689 ABCC9O60706 1549 aa48.41■■■■■ 5.34
SPOCK1-209ENST00000510689 RB1CC1Q8TDY2 1594 aa46.28■■■■■ 5
SPOCK1-209ENST00000510689 NACADO15069 1562 aa46.1■■■■■ 4.97
SPOCK1-209ENST00000510689 DCAF8L2P0C7V8 631 aa45.71■■■■■ 4.91
SPOCK1-209ENST00000510689 MYO15BQ96JP2 1530 aa45.67■■■■■ 4.9
SPOCK1-209ENST00000510689 UNC13AQ9UPW8 1703 aa45.4■■■■■ 4.86
SPOCK1-209ENST00000510689 ZCCHC6Q5VYS8 1495 aaKnown RBP45.38■■■■■ 4.86
SPOCK1-209ENST00000510689 DCAF1Q9Y4B6 1507 aa45.22■■■■■ 4.83
SPOCK1-209ENST00000510689 DNAJC5BQ9UF47 199 aa45.18■■■■■ 4.82
SPOCK1-209ENST00000510689 PABPN1Q86U42 306 aaKnown RBP eCLIP45.1■■■■■ 4.81
SPOCK1-209ENST00000510689 BICRAQ9NZM4 1560 aa45.05■■■■■ 4.8
SPOCK1-209ENST00000510689 SCRIBQ14160 1630 aa44.48■■■■■ 4.71
SPOCK1-209ENST00000510689 SHROOM4Q9ULL8 1493 aa44.4■■■■■ 4.7
SPOCK1-209ENST00000510689 EIF4G1Q04637 1599 aaKnown RBP43.82■■■■■ 4.61
SPOCK1-209ENST00000510689 CC2D2AQ9P2K1 1620 aa43.81■■■■■ 4.6
SPOCK1-209ENST00000510689 CECR2Q9BXF3 1484 aa43.57■■■■■ 4.56
SPOCK1-209ENST00000510689 NCAPD3P42695 1498 aa42.58■■■■■ 4.41
SPOCK1-209ENST00000510689 SMARCA4P51532 1647 aa42.54■■■■■ 4.4
SPOCK1-209ENST00000510689 ATAD2BQ9ULI0 1458 aa42.49■■■■■ 4.39
SPOCK1-209ENST00000510689 BAZ1AQ9NRL2 1556 aaPredicted RBP42.35■■■■■ 4.37
SPOCK1-209ENST00000510689 SMARCA2P51531 1590 aa42.35■■■■■ 4.37
SPOCK1-209ENST00000510689 HMGXB3Q12766 1538 aa42.28■■■■■ 4.36
SPOCK1-209ENST00000510689 PEG3Q9GZU2 1588 aa42.2■■■■■ 4.35
SPOCK1-209ENST00000510689 MROH2BQ7Z745 1585 aa42.12■■■■■ 4.33
SPOCK1-209ENST00000510689 BAZ1BQ9UIG0 1483 aaKnown RBP42.02■■■■■ 4.32
SPOCK1-209ENST00000510689 NESP48681 1621 aa41.75■■■■■ 4.27
SPOCK1-209ENST00000510689 ERCC6Q03468 1493 aa41.68■■■■■ 4.26
SPOCK1-209ENST00000510689 WIZO95785 1651 aa41.62■■■■■ 4.25
SPOCK1-209ENST00000510689 CUX2O14529 1486 aa41.59■■■■■ 4.25
SPOCK1-209ENST00000510689 LAMC3Q9Y6N6 1575 aa41.52■■■■■ 4.24
SPOCK1-209ENST00000510689 RSF1Q96T23 1441 aaPredicted RBP41.38■■■■■ 4.22
SPOCK1-209ENST00000510689 THOC2Q8NI27 1593 aaKnown RBP41.29■■■■■ 4.2
SPOCK1-209ENST00000510689 KIF21AQ7Z4S6 1674 aa41.26■■■■■ 4.2
SPOCK1-209ENST00000510689 CADPSQ9ULU8 1353 aa41.25■■■■■ 4.19
SPOCK1-209ENST00000510689 PDS5BQ9NTI5 1447 aa41.19■■■■■ 4.18
SPOCK1-209ENST00000510689 DNAJC5Q9H3Z4 198 aa41.15■■■■■ 4.18
SPOCK1-209ENST00000510689 TOP2AP11388 1531 aaKnown RBP41.1■■■■■ 4.17
SPOCK1-209ENST00000510689 CFTRP13569 1480 aa40.9■■■■■ 4.14
SPOCK1-209ENST00000510689 MRC2Q9UBG0 1479 aa40.85■■■■■ 4.13
SPOCK1-209ENST00000510689 WDR62O43379 1518 aa40.79■■■■■ 4.12
SPOCK1-209ENST00000510689 FANCD2Q9BXW9 1451 aa40.77■■■■■ 4.12
SPOCK1-209ENST00000510689 CEP164Q9UPV0 1460 aa40.74■■■■■ 4.11
SPOCK1-209ENST00000510689 CCDC88BA6NC98 1476 aa40.64■■■■■ 4.1
SPOCK1-209ENST00000510689 PRDM2Q13029 1718 aa40.58■■■■■ 4.09
SPOCK1-209ENST00000510689 URB2Q14146 1524 aaKnown RBP40.46■■■■■ 4.07
SPOCK1-209ENST00000510689 TOPBP1Q92547 1522 aa40.07■■■■■ 4.01
SPOCK1-209ENST00000510689 ABCC8Q09428 1581 aa39.97■■■■□ 3.99
SPOCK1-209ENST00000510689 DNMBPQ6XZF7 1577 aa39.95■■■■□ 3.99
SPOCK1-209ENST00000510689 IFT140Q96RY7 1462 aa39.94■■■■□ 3.98
SPOCK1-209ENST00000510689 ZNF608Q9ULD9 1512 aaPredicted RBP39.88■■■■□ 3.97
SPOCK1-209ENST00000510689 TARBP1Q13395 1621 aaKnown RBP39.75■■■■□ 3.95
SPOCK1-209ENST00000510689 OSCARQ8IYS5 282 aa39.7■■■■□ 3.95
SPOCK1-209ENST00000510689 POLA1P09884 1462 aaPredicted RBP39.68■■■■□ 3.94
SPOCK1-209ENST00000510689 EIF4G3O43432 1585 aaKnown RBP39.67■■■■□ 3.94
SPOCK1-209ENST00000510689 SUPT5HO00267 1087 aaKnown RBP39.66■■■■□ 3.94
SPOCK1-209ENST00000510689 CUX1P39880 1505 aa39.55■■■■□ 3.92
SPOCK1-209ENST00000510689 AQRO60306 1485 aaKnown RBP eCLIP39.53■■■■□ 3.92
SPOCK1-209ENST00000510689 RAD54L2Q9Y4B4 1467 aa39.51■■■■□ 3.92
SPOCK1-209ENST00000510689 FGD5Q6ZNL6 1462 aa39.47■■■■□ 3.91
SPOCK1-209ENST00000510689 SOGA1O94964 1423 aa39.46■■■■□ 3.91
SPOCK1-209ENST00000510689 TDRD9Q8NDG6 1382 aaKnown RBP39.33■■■■□ 3.89
SPOCK1-209ENST00000510689 TRIM41Q8WV44 630 aa39.33■■■■□ 3.89
SPOCK1-209ENST00000510689 CHD1O14646 1710 aa39.33■■■■□ 3.89
SPOCK1-209ENST00000510689 WDR97A6NE52 1622 aa39.32■■■■□ 3.89
SPOCK1-209ENST00000510689 RIMBP3CA6NJZ7 1639 aa39.22■■■■□ 3.87
SPOCK1-209ENST00000510689 RIMBP3BA6NNM3 1639 aa39.22■■■■□ 3.87
SPOCK1-209ENST00000510689 RIMBP3Q9UFD9 1639 aa39.22■■■■□ 3.87
SPOCK1-209ENST00000510689 ARHGEF11O15085 1522 aa39.12■■■■□ 3.85
SPOCK1-209ENST00000510689 SNAPC4Q5SXM2 1469 aa39.11■■■■□ 3.85
SPOCK1-209ENST00000510689 GRIN2BQ13224 1484 aa39.08■■■■□ 3.85
SPOCK1-209ENST00000510689 ABCA10Q8WWZ4 1543 aa39.08■■■■□ 3.85
SPOCK1-209ENST00000510689 MAGI1Q96QZ7 1491 aaPredicted RBP39.06■■■■□ 3.84
SPOCK1-209ENST00000510689 BIVM-ERCC5R4GMW8 1640 aa39.04■■■■□ 3.84
SPOCK1-209ENST00000510689 FBLN2P98095 1184 aa39.04■■■■□ 3.84
SPOCK1-209ENST00000510689 PBRM1Q86U86 1689 aa39.01■■■■□ 3.84
SPOCK1-209ENST00000510689 TOP2BQ02880 1626 aa39.01■■■■□ 3.84
SPOCK1-209ENST00000510689 ABCA5Q8WWZ7 1642 aa39.01■■■■□ 3.84
SPOCK1-209ENST00000510689 GAPVD1Q14C86 1478 aa39■■■■□ 3.83
SPOCK1-209ENST00000510689 SYNJ1O43426 1573 aa38.97■■■■□ 3.83
SPOCK1-209ENST00000510689 WRNQ14191 1432 aaPredicted RBP eCLIP38.96■■■■□ 3.83
SPOCK1-209ENST00000510689 SYNJ2O15056 1496 aa38.92■■■■□ 3.82
SPOCK1-209ENST00000510689 CLASP1Q7Z460 1538 aa38.91■■■■□ 3.82
SPOCK1-209ENST00000510689 CHMP7Q8WUX9 453 aaPredicted RBP38.87■■■■□ 3.81
SPOCK1-209ENST00000510689 ARAP1Q96P48 1450 aa38.78■■■■□ 3.8
SPOCK1-209ENST00000510689 CYB5RLQ6IPT4 315 aa38.72■■■■□ 3.79
SPOCK1-209ENST00000510689 ADAMTS12P58397 1594 aa38.65■■■■□ 3.78
SPOCK1-209ENST00000510689 GRIN2AQ12879 1464 aa38.6■■■■□ 3.77
SPOCK1-209ENST00000510689 ERICH3Q5RHP9 1530 aa38.58■■■■□ 3.77
SPOCK1-209ENST00000510689 FHAD1B1AJZ9 1412 aa38.53■■■■□ 3.76
SPOCK1-209ENST00000510689 NUP160Q12769 1436 aa38.5■■■■□ 3.75
SPOCK1-209ENST00000510689 CEP170Q5SW79 1584 aa38.48■■■■□ 3.75
SPOCK1-209ENST00000510689 SHROOM2Q13796 1616 aa38.33■■■■□ 3.73
SPOCK1-209ENST00000510689 ERCC6L2Q5T890 1561 aa38.32■■■■□ 3.73
SPOCK1-209ENST00000510689 IGF1RP08069 1367 aa38.2■■■■□ 3.71
SPOCK1-209ENST00000510689 KIF27Q86VH2 1401 aa38.17■■■■□ 3.7
SPOCK1-209ENST00000510689 RUSC2Q8N2Y8 1516 aa38.1■■■■□ 3.69
SPOCK1-209ENST00000510689 CUL7Q14999 1698 aa38.08■■■■□ 3.69
SPOCK1-209ENST00000510689 TRHP20396 242 aaPredicted RBP38.06■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms