RNA–Protein interactions for RNA: ENST00000510405.5

SPOCK1-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-208ENST00000510405 NISCHQ9Y2I1 1504 aa42■■■■■ 4.31
SPOCK1-208ENST00000510405 CCDC180Q9P1Z9 1646 aa37.52■■■■□ 3.6
SPOCK1-208ENST00000510405 ABCC9O60706 1549 aa36.66■■■■□ 3.46
SPOCK1-208ENST00000510405 RB1CC1Q8TDY2 1594 aa35.36■■■■□ 3.25
SPOCK1-208ENST00000510405 NACADO15069 1562 aa35.3■■■■□ 3.24
SPOCK1-208ENST00000510405 MYO15BQ96JP2 1530 aa35.1■■■■□ 3.21
SPOCK1-208ENST00000510405 DCAF8L2P0C7V8 631 aa35.01■■■■□ 3.2
SPOCK1-208ENST00000510405 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
SPOCK1-208ENST00000510405 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
SPOCK1-208ENST00000510405 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
SPOCK1-208ENST00000510405 BICRAQ9NZM4 1560 aa34.18■■■■□ 3.06
SPOCK1-208ENST00000510405 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
SPOCK1-208ENST00000510405 SCRIBQ14160 1630 aa34.05■■■■□ 3.04
SPOCK1-208ENST00000510405 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
SPOCK1-208ENST00000510405 DNAJC5BQ9UF47 199 aa33.68■■■□□ 2.98
SPOCK1-208ENST00000510405 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
SPOCK1-208ENST00000510405 CC2D2AQ9P2K1 1620 aa33.22■■■□□ 2.91
SPOCK1-208ENST00000510405 CECR2Q9BXF3 1484 aa33.03■■■□□ 2.88
SPOCK1-208ENST00000510405 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
SPOCK1-208ENST00000510405 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
SPOCK1-208ENST00000510405 NCAPD3P42695 1498 aa32.53■■■□□ 2.8
SPOCK1-208ENST00000510405 SMARCA2P51531 1590 aa32.52■■■□□ 2.8
SPOCK1-208ENST00000510405 ATAD2BQ9ULI0 1458 aa32.47■■■□□ 2.79
SPOCK1-208ENST00000510405 HMGXB3Q12766 1538 aa32.39■■■□□ 2.78
SPOCK1-208ENST00000510405 PEG3Q9GZU2 1588 aa32.37■■■□□ 2.77
SPOCK1-208ENST00000510405 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
SPOCK1-208ENST00000510405 BAZ1BQ9UIG0 1483 aaKnown RBP32.23■■■□□ 2.75
SPOCK1-208ENST00000510405 WIZO95785 1651 aa31.93■■■□□ 2.7
SPOCK1-208ENST00000510405 RSF1Q96T23 1441 aaPredicted RBP31.89■■■□□ 2.7
SPOCK1-208ENST00000510405 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
SPOCK1-208ENST00000510405 ERCC6Q03468 1493 aa31.71■■■□□ 2.67
SPOCK1-208ENST00000510405 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
SPOCK1-208ENST00000510405 NESP48681 1621 aa31.64■■■□□ 2.66
SPOCK1-208ENST00000510405 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
SPOCK1-208ENST00000510405 PDS5BQ9NTI5 1447 aa31.52■■■□□ 2.64
SPOCK1-208ENST00000510405 CUX2O14529 1486 aa31.5■■■□□ 2.63
SPOCK1-208ENST00000510405 CFTRP13569 1480 aa31.33■■■□□ 2.61
SPOCK1-208ENST00000510405 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
SPOCK1-208ENST00000510405 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
SPOCK1-208ENST00000510405 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
SPOCK1-208ENST00000510405 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
SPOCK1-208ENST00000510405 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
SPOCK1-208ENST00000510405 MRC2Q9UBG0 1479 aa31.16■■■□□ 2.58
SPOCK1-208ENST00000510405 PRDM2Q13029 1718 aa31.14■■■□□ 2.58
SPOCK1-208ENST00000510405 WDR62O43379 1518 aa31.07■■■□□ 2.56
SPOCK1-208ENST00000510405 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
SPOCK1-208ENST00000510405 URB2Q14146 1524 aaKnown RBP30.82■■■□□ 2.52
SPOCK1-208ENST00000510405 ABCC8Q09428 1581 aa30.77■■■□□ 2.52
SPOCK1-208ENST00000510405 TOPBP1Q92547 1522 aa30.65■■■□□ 2.5
SPOCK1-208ENST00000510405 DNMBPQ6XZF7 1577 aa30.64■■■□□ 2.5
SPOCK1-208ENST00000510405 DNAJC5Q9H3Z4 198 aa30.62■■■□□ 2.49
SPOCK1-208ENST00000510405 IFT140Q96RY7 1462 aa30.55■■■□□ 2.48
SPOCK1-208ENST00000510405 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
SPOCK1-208ENST00000510405 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
SPOCK1-208ENST00000510405 CUX1P39880 1505 aa30.32■■■□□ 2.44
SPOCK1-208ENST00000510405 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
SPOCK1-208ENST00000510405 FGD5Q6ZNL6 1462 aa30.26■■■□□ 2.44
SPOCK1-208ENST00000510405 EIF4G3O43432 1585 aaKnown RBP30.25■■■□□ 2.43
SPOCK1-208ENST00000510405 SOGA1O94964 1423 aa30.25■■■□□ 2.43
SPOCK1-208ENST00000510405 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
SPOCK1-208ENST00000510405 RAD54L2Q9Y4B4 1467 aa30.16■■■□□ 2.42
SPOCK1-208ENST00000510405 WRNQ14191 1432 aaPredicted RBP eCLIP30.12■■■□□ 2.41
SPOCK1-208ENST00000510405 AQRO60306 1485 aaKnown RBP eCLIP30.11■■■□□ 2.41
SPOCK1-208ENST00000510405 OSCARQ8IYS5 282 aa30.1■■■□□ 2.41
SPOCK1-208ENST00000510405 TOP2BQ02880 1626 aa30.09■■■□□ 2.41
SPOCK1-208ENST00000510405 BIVM-ERCC5R4GMW8 1640 aa30.09■■■□□ 2.41
SPOCK1-208ENST00000510405 TDRD9Q8NDG6 1382 aaKnown RBP30.03■■■□□ 2.4
SPOCK1-208ENST00000510405 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
SPOCK1-208ENST00000510405 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
SPOCK1-208ENST00000510405 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
SPOCK1-208ENST00000510405 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
SPOCK1-208ENST00000510405 GAPVD1Q14C86 1478 aa29.92■■■□□ 2.38
SPOCK1-208ENST00000510405 ABCA5Q8WWZ7 1642 aa29.9■■■□□ 2.38
SPOCK1-208ENST00000510405 CHD1O14646 1710 aa29.88■■■□□ 2.37
SPOCK1-208ENST00000510405 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
SPOCK1-208ENST00000510405 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
SPOCK1-208ENST00000510405 SYNJ2O15056 1496 aa29.79■■■□□ 2.36
SPOCK1-208ENST00000510405 FBLN2P98095 1184 aa29.78■■■□□ 2.36
SPOCK1-208ENST00000510405 CHMP7Q8WUX9 453 aaPredicted RBP29.74■■■□□ 2.35
SPOCK1-208ENST00000510405 ERICH3Q5RHP9 1530 aa29.7■■■□□ 2.34
SPOCK1-208ENST00000510405 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
SPOCK1-208ENST00000510405 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
SPOCK1-208ENST00000510405 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
SPOCK1-208ENST00000510405 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
SPOCK1-208ENST00000510405 FHAD1B1AJZ9 1412 aa29.59■■■□□ 2.33
SPOCK1-208ENST00000510405 ARHGEF11O15085 1522 aa29.59■■■□□ 2.33
SPOCK1-208ENST00000510405 CLASP1Q7Z460 1538 aa29.59■■■□□ 2.33
SPOCK1-208ENST00000510405 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
SPOCK1-208ENST00000510405 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
SPOCK1-208ENST00000510405 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
SPOCK1-208ENST00000510405 NUP160Q12769 1436 aa29.43■■■□□ 2.3
SPOCK1-208ENST00000510405 CUL7Q14999 1698 aa29.41■■■□□ 2.3
SPOCK1-208ENST00000510405 CEP170Q5SW79 1584 aa29.37■■■□□ 2.29
SPOCK1-208ENST00000510405 IGF1RP08069 1367 aa29.37■■■□□ 2.29
SPOCK1-208ENST00000510405 ARAP1Q96P48 1450 aa29.31■■■□□ 2.28
SPOCK1-208ENST00000510405 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
SPOCK1-208ENST00000510405 SHROOM2Q13796 1616 aa29.24■■■□□ 2.27
SPOCK1-208ENST00000510405 CARMIL1Q5VZK9 1371 aa29.21■■■□□ 2.27
SPOCK1-208ENST00000510405 RUSC2Q8N2Y8 1516 aa29.19■■■□□ 2.26
SPOCK1-208ENST00000510405 KIAA0586Q9BVV6 1533 aa29.14■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms