RNA–Protein interactions for RNA: ENST00000510234.5

LINC01411-204, Transcript of long intergenic non-protein coding RNA 1411, humanhuman

TSL 3 BASIC

Gene LINC01411, Length 938 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01411-204ENST00000510234 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.07
LINC01411-204ENST00000510234 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
LINC01411-204ENST00000510234 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
LINC01411-204ENST00000510234 ABCC9O60706 1549 aa20.19■□□□□ 0.82
LINC01411-204ENST00000510234 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
LINC01411-204ENST00000510234 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
LINC01411-204ENST00000510234 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
LINC01411-204ENST00000510234 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
LINC01411-204ENST00000510234 NACADO15069 1562 aa18.64■□□□□ 0.57
LINC01411-204ENST00000510234 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
LINC01411-204ENST00000510234 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
LINC01411-204ENST00000510234 UNC13AQ9UPW8 1703 aa18.53■□□□□ 0.56
LINC01411-204ENST00000510234 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
LINC01411-204ENST00000510234 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
LINC01411-204ENST00000510234 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
LINC01411-204ENST00000510234 CC2D2AQ9P2K1 1620 aa18.17■□□□□ 0.5
LINC01411-204ENST00000510234 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
LINC01411-204ENST00000510234 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
LINC01411-204ENST00000510234 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
LINC01411-204ENST00000510234 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
LINC01411-204ENST00000510234 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
LINC01411-204ENST00000510234 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
LINC01411-204ENST00000510234 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
LINC01411-204ENST00000510234 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
LINC01411-204ENST00000510234 CUX2O14529 1486 aa17.47■□□□□ 0.39
LINC01411-204ENST00000510234 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
LINC01411-204ENST00000510234 NESP48681 1621 aa17.25■□□□□ 0.35
LINC01411-204ENST00000510234 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
LINC01411-204ENST00000510234 FOXD1Q16676 465 aa17.25■□□□□ 0.35
LINC01411-204ENST00000510234 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
LINC01411-204ENST00000510234 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
LINC01411-204ENST00000510234 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
LINC01411-204ENST00000510234 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
LINC01411-204ENST00000510234 SMARCA4P51532 1647 aa17.02■□□□□ 0.31
LINC01411-204ENST00000510234 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
LINC01411-204ENST00000510234 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
LINC01411-204ENST00000510234 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
LINC01411-204ENST00000510234 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.3
LINC01411-204ENST00000510234 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
LINC01411-204ENST00000510234 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
LINC01411-204ENST00000510234 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
LINC01411-204ENST00000510234 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
LINC01411-204ENST00000510234 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
LINC01411-204ENST00000510234 WDR62O43379 1518 aa16.73■□□□□ 0.27
LINC01411-204ENST00000510234 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
LINC01411-204ENST00000510234 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
LINC01411-204ENST00000510234 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
LINC01411-204ENST00000510234 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
LINC01411-204ENST00000510234 WIZO95785 1651 aa16.54■□□□□ 0.24
LINC01411-204ENST00000510234 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
LINC01411-204ENST00000510234 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
LINC01411-204ENST00000510234 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
LINC01411-204ENST00000510234 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
LINC01411-204ENST00000510234 CFTRP13569 1480 aa16.44■□□□□ 0.22
LINC01411-204ENST00000510234 MSH5O43196 834 aa16.44■□□□□ 0.22
LINC01411-204ENST00000510234 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
LINC01411-204ENST00000510234 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
LINC01411-204ENST00000510234 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
LINC01411-204ENST00000510234 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
LINC01411-204ENST00000510234 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
LINC01411-204ENST00000510234 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
LINC01411-204ENST00000510234 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
LINC01411-204ENST00000510234 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
LINC01411-204ENST00000510234 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
LINC01411-204ENST00000510234 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
LINC01411-204ENST00000510234 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
LINC01411-204ENST00000510234 CHD1O14646 1710 aa16.16■□□□□ 0.18
LINC01411-204ENST00000510234 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
LINC01411-204ENST00000510234 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
LINC01411-204ENST00000510234 FBLN2P98095 1184 aa16.11■□□□□ 0.17
LINC01411-204ENST00000510234 TARBP1Q13395 1621 aaKnown RBP16.08■□□□□ 0.17
LINC01411-204ENST00000510234 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
LINC01411-204ENST00000510234 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
LINC01411-204ENST00000510234 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
LINC01411-204ENST00000510234 RAD54L2Q9Y4B4 1467 aa16.01■□□□□ 0.15
LINC01411-204ENST00000510234 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
LINC01411-204ENST00000510234 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
LINC01411-204ENST00000510234 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
LINC01411-204ENST00000510234 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
LINC01411-204ENST00000510234 SOGA1O94964 1423 aa15.9■□□□□ 0.14
LINC01411-204ENST00000510234 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
LINC01411-204ENST00000510234 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
LINC01411-204ENST00000510234 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
LINC01411-204ENST00000510234 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
LINC01411-204ENST00000510234 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
LINC01411-204ENST00000510234 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
LINC01411-204ENST00000510234 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
LINC01411-204ENST00000510234 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
LINC01411-204ENST00000510234 CUX1P39880 1505 aa15.78■□□□□ 0.12
LINC01411-204ENST00000510234 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
LINC01411-204ENST00000510234 WDR97A6NE52 1622 aa15.75■□□□□ 0.11
LINC01411-204ENST00000510234 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
LINC01411-204ENST00000510234 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
LINC01411-204ENST00000510234 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
LINC01411-204ENST00000510234 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
LINC01411-204ENST00000510234 KIF13AQ9H1H9 1805 aa15.62■□□□□ 0.09
LINC01411-204ENST00000510234 ADRA2BP18089 450 aa15.62■□□□□ 0.09
LINC01411-204ENST00000510234 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
LINC01411-204ENST00000510234 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
LINC01411-204ENST00000510234 NUP160Q12769 1436 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms