RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
PROM1-210ENST00000510224 ABCC9O60706 1549 aa16.88■□□□□ 0.29
PROM1-210ENST00000510224 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
PROM1-210ENST00000510224 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
PROM1-210ENST00000510224 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
PROM1-210ENST00000510224 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
PROM1-210ENST00000510224 NACADO15069 1562 aa15.78■□□□□ 0.12
PROM1-210ENST00000510224 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
PROM1-210ENST00000510224 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.09
PROM1-210ENST00000510224 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
PROM1-210ENST00000510224 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
PROM1-210ENST00000510224 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
PROM1-210ENST00000510224 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
PROM1-210ENST00000510224 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
PROM1-210ENST00000510224 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
PROM1-210ENST00000510224 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
PROM1-210ENST00000510224 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
PROM1-210ENST00000510224 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
PROM1-210ENST00000510224 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
PROM1-210ENST00000510224 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
PROM1-210ENST00000510224 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
PROM1-210ENST00000510224 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
PROM1-210ENST00000510224 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
PROM1-210ENST00000510224 ERCC6Q03468 1493 aa14.58□□□□□ -0.07
PROM1-210ENST00000510224 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
PROM1-210ENST00000510224 MROH2BQ7Z745 1585 aa14.57□□□□□ -0.08
PROM1-210ENST00000510224 NESP48681 1621 aa14.5□□□□□ -0.09
PROM1-210ENST00000510224 HMGXB3Q12766 1538 aa14.44□□□□□ -0.1
PROM1-210ENST00000510224 WIZO95785 1651 aa14.4□□□□□ -0.1
PROM1-210ENST00000510224 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
PROM1-210ENST00000510224 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
PROM1-210ENST00000510224 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
PROM1-210ENST00000510224 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
PROM1-210ENST00000510224 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
PROM1-210ENST00000510224 CUX2O14529 1486 aa14.22□□□□□ -0.13
PROM1-210ENST00000510224 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
PROM1-210ENST00000510224 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
PROM1-210ENST00000510224 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
PROM1-210ENST00000510224 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
PROM1-210ENST00000510224 FANCD2Q9BXW9 1451 aa14.13□□□□□ -0.15
PROM1-210ENST00000510224 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
PROM1-210ENST00000510224 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
PROM1-210ENST00000510224 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
PROM1-210ENST00000510224 THOC2Q8NI27 1593 aaKnown RBP14.07□□□□□ -0.16
PROM1-210ENST00000510224 CFTRP13569 1480 aa14.07□□□□□ -0.16
PROM1-210ENST00000510224 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
PROM1-210ENST00000510224 FBLN2P98095 1184 aa13.95□□□□□ -0.18
PROM1-210ENST00000510224 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
PROM1-210ENST00000510224 WDR62O43379 1518 aa13.94□□□□□ -0.18
PROM1-210ENST00000510224 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
PROM1-210ENST00000510224 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
PROM1-210ENST00000510224 ZNF608Q9ULD9 1512 aaPredicted RBP13.83□□□□□ -0.2
PROM1-210ENST00000510224 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
PROM1-210ENST00000510224 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
PROM1-210ENST00000510224 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
PROM1-210ENST00000510224 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.2
PROM1-210ENST00000510224 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
PROM1-210ENST00000510224 SOGA1O94964 1423 aa13.76□□□□□ -0.21
PROM1-210ENST00000510224 PRDM2Q13029 1718 aa13.75□□□□□ -0.21
PROM1-210ENST00000510224 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
PROM1-210ENST00000510224 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
PROM1-210ENST00000510224 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
PROM1-210ENST00000510224 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
PROM1-210ENST00000510224 CYB5RLQ6IPT4 315 aa13.68□□□□□ -0.22
PROM1-210ENST00000510224 CUX1P39880 1505 aa13.65□□□□□ -0.22
PROM1-210ENST00000510224 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
PROM1-210ENST00000510224 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PROM1-210ENST00000510224 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
PROM1-210ENST00000510224 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.23
PROM1-210ENST00000510224 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
PROM1-210ENST00000510224 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
PROM1-210ENST00000510224 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
PROM1-210ENST00000510224 CHD1O14646 1710 aa13.51□□□□□ -0.25
PROM1-210ENST00000510224 TTBK1Q5TCY1 1321 aaPredicted RBP13.5□□□□□ -0.25
PROM1-210ENST00000510224 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
PROM1-210ENST00000510224 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
PROM1-210ENST00000510224 RIMBP3CA6NJZ7 1639 aa13.47□□□□□ -0.25
PROM1-210ENST00000510224 RIMBP3BA6NNM3 1639 aa13.47□□□□□ -0.25
PROM1-210ENST00000510224 RIMBP3Q9UFD9 1639 aa13.47□□□□□ -0.25
PROM1-210ENST00000510224 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.26
PROM1-210ENST00000510224 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
PROM1-210ENST00000510224 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
PROM1-210ENST00000510224 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
PROM1-210ENST00000510224 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
PROM1-210ENST00000510224 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
PROM1-210ENST00000510224 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
PROM1-210ENST00000510224 GRIN2AQ12879 1464 aa13.35□□□□□ -0.27
PROM1-210ENST00000510224 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
PROM1-210ENST00000510224 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
PROM1-210ENST00000510224 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
PROM1-210ENST00000510224 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
PROM1-210ENST00000510224 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
PROM1-210ENST00000510224 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
PROM1-210ENST00000510224 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
PROM1-210ENST00000510224 IGF1RP08069 1367 aa13.28□□□□□ -0.28
PROM1-210ENST00000510224 CLASP1Q7Z460 1538 aa13.28□□□□□ -0.28
PROM1-210ENST00000510224 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
PROM1-210ENST00000510224 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
PROM1-210ENST00000510224 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
PROM1-210ENST00000510224 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms