RNA–Protein interactions for RNA: ENST00000510177.5

GDNF-206, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene GDNF, Length 295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-206ENST00000510177 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
GDNF-206ENST00000510177 ABCC9O60706 1549 aa37.5■■■■□ 3.59
GDNF-206ENST00000510177 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.49
GDNF-206ENST00000510177 DNAJC5BQ9UF47 199 aa35.69■■■■□ 3.3
GDNF-206ENST00000510177 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
GDNF-206ENST00000510177 NACADO15069 1562 aa35■■■■□ 3.19
GDNF-206ENST00000510177 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
GDNF-206ENST00000510177 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
GDNF-206ENST00000510177 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
GDNF-206ENST00000510177 BICRAQ9NZM4 1560 aa34.38■■■■□ 3.09
GDNF-206ENST00000510177 MYO15BQ96JP2 1530 aa34.33■■■■□ 3.09
GDNF-206ENST00000510177 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
GDNF-206ENST00000510177 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
GDNF-206ENST00000510177 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
GDNF-206ENST00000510177 CC2D2AQ9P2K1 1620 aa33.79■■■■□ 3
GDNF-206ENST00000510177 DCAF1Q9Y4B6 1507 aa33.71■■■□□ 2.99
GDNF-206ENST00000510177 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
GDNF-206ENST00000510177 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
GDNF-206ENST00000510177 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
GDNF-206ENST00000510177 CUX2O14529 1486 aa32.47■■■□□ 2.79
GDNF-206ENST00000510177 ERCC6Q03468 1493 aa32.39■■■□□ 2.78
GDNF-206ENST00000510177 NCAPD3P42695 1498 aa32.36■■■□□ 2.77
GDNF-206ENST00000510177 ATAD2BQ9ULI0 1458 aa32.22■■■□□ 2.75
GDNF-206ENST00000510177 NESP48681 1621 aa32.06■■■□□ 2.72
GDNF-206ENST00000510177 SMARCA2P51531 1590 aa32.03■■■□□ 2.72
GDNF-206ENST00000510177 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
GDNF-206ENST00000510177 SMARCA4P51532 1647 aa31.99■■■□□ 2.71
GDNF-206ENST00000510177 BAZ1BQ9UIG0 1483 aaKnown RBP31.85■■■□□ 2.69
GDNF-206ENST00000510177 THOC2Q8NI27 1593 aaKnown RBP31.77■■■□□ 2.68
GDNF-206ENST00000510177 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
GDNF-206ENST00000510177 PEG3Q9GZU2 1588 aa31.67■■■□□ 2.66
GDNF-206ENST00000510177 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
GDNF-206ENST00000510177 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
GDNF-206ENST00000510177 MROH2BQ7Z745 1585 aa31.54■■■□□ 2.64
GDNF-206ENST00000510177 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.64
GDNF-206ENST00000510177 TRIM41Q8WV44 630 aa31.49■■■□□ 2.63
GDNF-206ENST00000510177 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
GDNF-206ENST00000510177 MRC2Q9UBG0 1479 aa31.32■■■□□ 2.6
GDNF-206ENST00000510177 WDR62O43379 1518 aa31.24■■■□□ 2.59
GDNF-206ENST00000510177 WIZO95785 1651 aa31.09■■■□□ 2.57
GDNF-206ENST00000510177 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
GDNF-206ENST00000510177 FANCD2Q9BXW9 1451 aa31.02■■■□□ 2.56
GDNF-206ENST00000510177 OSCARQ8IYS5 282 aa30.95■■■□□ 2.55
GDNF-206ENST00000510177 CFTRP13569 1480 aa30.89■■■□□ 2.54
GDNF-206ENST00000510177 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
GDNF-206ENST00000510177 RSF1Q96T23 1441 aaPredicted RBP30.71■■■□□ 2.51
GDNF-206ENST00000510177 TOP2AP11388 1531 aaKnown RBP30.67■■■□□ 2.5
GDNF-206ENST00000510177 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
GDNF-206ENST00000510177 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
GDNF-206ENST00000510177 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
GDNF-206ENST00000510177 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
GDNF-206ENST00000510177 IFT140Q96RY7 1462 aa30.48■■■□□ 2.47
GDNF-206ENST00000510177 ARHGEF11O15085 1522 aa30.44■■■□□ 2.46
GDNF-206ENST00000510177 CCDC88BA6NC98 1476 aa30.38■■■□□ 2.45
GDNF-206ENST00000510177 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
GDNF-206ENST00000510177 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
GDNF-206ENST00000510177 CYB5RLQ6IPT4 315 aa30.3■■■□□ 2.44
GDNF-206ENST00000510177 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
GDNF-206ENST00000510177 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
GDNF-206ENST00000510177 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
GDNF-206ENST00000510177 DNMBPQ6XZF7 1577 aa30.17■■■□□ 2.42
GDNF-206ENST00000510177 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
GDNF-206ENST00000510177 FBLN2P98095 1184 aa30.13■■■□□ 2.41
GDNF-206ENST00000510177 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
GDNF-206ENST00000510177 TARBP1Q13395 1621 aaKnown RBP30.09■■■□□ 2.41
GDNF-206ENST00000510177 CHD1O14646 1710 aa30.08■■■□□ 2.41
GDNF-206ENST00000510177 POLA1P09884 1462 aaPredicted RBP30.03■■■□□ 2.4
GDNF-206ENST00000510177 RAD54L2Q9Y4B4 1467 aa29.96■■■□□ 2.39
GDNF-206ENST00000510177 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
GDNF-206ENST00000510177 SOGA1O94964 1423 aa29.9■■■□□ 2.38
GDNF-206ENST00000510177 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
GDNF-206ENST00000510177 CLASP1Q7Z460 1538 aa29.8■■■□□ 2.36
GDNF-206ENST00000510177 CHMP7Q8WUX9 453 aaPredicted RBP29.79■■■□□ 2.36
GDNF-206ENST00000510177 FGD5Q6ZNL6 1462 aa29.77■■■□□ 2.36
GDNF-206ENST00000510177 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
GDNF-206ENST00000510177 MAGI1Q96QZ7 1491 aaPredicted RBP29.7■■■□□ 2.35
GDNF-206ENST00000510177 WDR97A6NE52 1622 aa29.69■■■□□ 2.34
GDNF-206ENST00000510177 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
GDNF-206ENST00000510177 CUX1P39880 1505 aa29.66■■■□□ 2.34
GDNF-206ENST00000510177 SYNJ2O15056 1496 aa29.63■■■□□ 2.33
GDNF-206ENST00000510177 AEBP2Q6ZN18 517 aaPredicted RBP29.62■■■□□ 2.33
GDNF-206ENST00000510177 GAPVD1Q14C86 1478 aa29.55■■■□□ 2.32
GDNF-206ENST00000510177 PBRM1Q86U86 1689 aa29.43■■■□□ 2.3
GDNF-206ENST00000510177 ABCA10Q8WWZ4 1543 aa29.38■■■□□ 2.29
GDNF-206ENST00000510177 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
GDNF-206ENST00000510177 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
GDNF-206ENST00000510177 GRIN2AQ12879 1464 aa29.29■■■□□ 2.28
GDNF-206ENST00000510177 NUP160Q12769 1436 aa29.22■■■□□ 2.27
GDNF-206ENST00000510177 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
GDNF-206ENST00000510177 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
GDNF-206ENST00000510177 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
GDNF-206ENST00000510177 FHAD1B1AJZ9 1412 aa29.11■■■□□ 2.25
GDNF-206ENST00000510177 SHROOM2Q13796 1616 aa29.09■■■□□ 2.25
GDNF-206ENST00000510177 SUPT5HO00267 1087 aaKnown RBP29.03■■■□□ 2.24
GDNF-206ENST00000510177 PRG4Q92954 1404 aaPredicted RBP29.01■■■□□ 2.23
GDNF-206ENST00000510177 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
GDNF-206ENST00000510177 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
GDNF-206ENST00000510177 BIVM-ERCC5R4GMW8 1640 aa28.96■■■□□ 2.23
GDNF-206ENST00000510177 JPH4Q96JJ6 628 aa28.95■■■□□ 2.22
GDNF-206ENST00000510177 KIF13AQ9H1H9 1805 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms