RNA–Protein interactions for RNA: ENST00000510088.5

CCDC169-213, Transcript of coiled-coil domain containing 169, humanhuman

TSL 1 (best) BASIC

Gene CCDC169, Length 1,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC169-213ENST00000510088 AEBP2Q6ZN18 517 aaPredicted RBP27.05■■□□□ 1.92
CCDC169-213ENST00000510088 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
CCDC169-213ENST00000510088 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
CCDC169-213ENST00000510088 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
CCDC169-213ENST00000510088 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.25
CCDC169-213ENST00000510088 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
CCDC169-213ENST00000510088 ABCC9O60706 1549 aa22.24■■□□□ 1.15
CCDC169-213ENST00000510088 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
CCDC169-213ENST00000510088 NACADO15069 1562 aa21.48■■□□□ 1.03
CCDC169-213ENST00000510088 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
CCDC169-213ENST00000510088 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
CCDC169-213ENST00000510088 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
CCDC169-213ENST00000510088 FOXD1Q16676 465 aa21.43■■□□□ 1.02
CCDC169-213ENST00000510088 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
CCDC169-213ENST00000510088 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
CCDC169-213ENST00000510088 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
CCDC169-213ENST00000510088 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
CCDC169-213ENST00000510088 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCDC169-213ENST00000510088 BICRAQ9NZM4 1560 aa20.78■□□□□ 0.92
CCDC169-213ENST00000510088 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
CCDC169-213ENST00000510088 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
CCDC169-213ENST00000510088 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
CCDC169-213ENST00000510088 ADRA2BP18089 450 aa20.31■□□□□ 0.84
CCDC169-213ENST00000510088 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
CCDC169-213ENST00000510088 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
CCDC169-213ENST00000510088 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
CCDC169-213ENST00000510088 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
CCDC169-213ENST00000510088 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
CCDC169-213ENST00000510088 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
CCDC169-213ENST00000510088 MSH5O43196 834 aa19.91■□□□□ 0.78
CCDC169-213ENST00000510088 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
CCDC169-213ENST00000510088 MROH2BQ7Z745 1585 aa19.86■□□□□ 0.77
CCDC169-213ENST00000510088 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
CCDC169-213ENST00000510088 SMARCA2P51531 1590 aa19.84■□□□□ 0.77
CCDC169-213ENST00000510088 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
CCDC169-213ENST00000510088 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
CCDC169-213ENST00000510088 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
CCDC169-213ENST00000510088 BAZ1BQ9UIG0 1483 aaKnown RBP19.7■□□□□ 0.74
CCDC169-213ENST00000510088 WIZO95785 1651 aa19.59■□□□□ 0.73
CCDC169-213ENST00000510088 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
CCDC169-213ENST00000510088 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
CCDC169-213ENST00000510088 NESP48681 1621 aa19.27■□□□□ 0.68
CCDC169-213ENST00000510088 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
CCDC169-213ENST00000510088 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
CCDC169-213ENST00000510088 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
CCDC169-213ENST00000510088 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
CCDC169-213ENST00000510088 CFTRP13569 1480 aa19.18■□□□□ 0.66
CCDC169-213ENST00000510088 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
CCDC169-213ENST00000510088 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
CCDC169-213ENST00000510088 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
CCDC169-213ENST00000510088 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
CCDC169-213ENST00000510088 CUX2O14529 1486 aa18.97■□□□□ 0.63
CCDC169-213ENST00000510088 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
CCDC169-213ENST00000510088 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
CCDC169-213ENST00000510088 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
CCDC169-213ENST00000510088 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
CCDC169-213ENST00000510088 WDR62O43379 1518 aa18.86■□□□□ 0.61
CCDC169-213ENST00000510088 URB2Q14146 1524 aaKnown RBP18.83■□□□□ 0.6
CCDC169-213ENST00000510088 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
CCDC169-213ENST00000510088 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
CCDC169-213ENST00000510088 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
CCDC169-213ENST00000510088 CUX1P39880 1505 aa18.63■□□□□ 0.57
CCDC169-213ENST00000510088 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
CCDC169-213ENST00000510088 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
CCDC169-213ENST00000510088 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
CCDC169-213ENST00000510088 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
CCDC169-213ENST00000510088 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
CCDC169-213ENST00000510088 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
CCDC169-213ENST00000510088 SOGA1O94964 1423 aa18.53■□□□□ 0.56
CCDC169-213ENST00000510088 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
CCDC169-213ENST00000510088 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
CCDC169-213ENST00000510088 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
CCDC169-213ENST00000510088 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
CCDC169-213ENST00000510088 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
CCDC169-213ENST00000510088 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
CCDC169-213ENST00000510088 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
CCDC169-213ENST00000510088 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
CCDC169-213ENST00000510088 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC169-213ENST00000510088 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
CCDC169-213ENST00000510088 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
CCDC169-213ENST00000510088 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
CCDC169-213ENST00000510088 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
CCDC169-213ENST00000510088 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
CCDC169-213ENST00000510088 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
CCDC169-213ENST00000510088 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.51
CCDC169-213ENST00000510088 DNAJC5Q9H3Z4 198 aa18.25■□□□□ 0.51
CCDC169-213ENST00000510088 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
CCDC169-213ENST00000510088 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
CCDC169-213ENST00000510088 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
CCDC169-213ENST00000510088 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
CCDC169-213ENST00000510088 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
CCDC169-213ENST00000510088 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
CCDC169-213ENST00000510088 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
CCDC169-213ENST00000510088 FBLN2P98095 1184 aa18.16■□□□□ 0.5
CCDC169-213ENST00000510088 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
CCDC169-213ENST00000510088 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
CCDC169-213ENST00000510088 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
CCDC169-213ENST00000510088 IGF1RP08069 1367 aa18.12■□□□□ 0.49
CCDC169-213ENST00000510088 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
CCDC169-213ENST00000510088 CHD1O14646 1710 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms