RNA–Protein interactions for RNA: ENST00000510072.1

TRIM41-205, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 752 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-205ENST00000510072 NISCHQ9Y2I1 1504 aa61.25■■■■■ 7.4
TRIM41-205ENST00000510072 CCDC180Q9P1Z9 1646 aa54.7■■■■■ 6.35
TRIM41-205ENST00000510072 ABCC9O60706 1549 aa53.78■■■■■ 6.2
TRIM41-205ENST00000510072 RB1CC1Q8TDY2 1594 aa51.59■■■■■ 5.85
TRIM41-205ENST00000510072 NACADO15069 1562 aa51.46■■■■■ 5.83
TRIM41-205ENST00000510072 MYO15BQ96JP2 1530 aa51.08■■■■■ 5.77
TRIM41-205ENST00000510072 DCAF8L2P0C7V8 631 aa50.99■■■■■ 5.75
TRIM41-205ENST00000510072 ZCCHC6Q5VYS8 1495 aaKnown RBP50.98■■■■■ 5.75
TRIM41-205ENST00000510072 DCAF1Q9Y4B6 1507 aa50.71■■■■■ 5.71
TRIM41-205ENST00000510072 UNC13AQ9UPW8 1703 aa50.56■■■■■ 5.68
TRIM41-205ENST00000510072 BICRAQ9NZM4 1560 aa50.18■■■■■ 5.62
TRIM41-205ENST00000510072 PABPN1Q86U42 306 aaKnown RBP eCLIP50.1■■■■■ 5.61
TRIM41-205ENST00000510072 SCRIBQ14160 1630 aa49.79■■■■■ 5.56
TRIM41-205ENST00000510072 DNAJC5BQ9UF47 199 aa49.77■■■■■ 5.56
TRIM41-205ENST00000510072 SHROOM4Q9ULL8 1493 aa49.57■■■■■ 5.53
TRIM41-205ENST00000510072 EIF4G1Q04637 1599 aaKnown RBP48.81■■■■■ 5.4
TRIM41-205ENST00000510072 CC2D2AQ9P2K1 1620 aa48.7■■■■■ 5.39
TRIM41-205ENST00000510072 CECR2Q9BXF3 1484 aa48.38■■■■■ 5.34
TRIM41-205ENST00000510072 SMARCA4P51532 1647 aa47.64■■■■■ 5.22
TRIM41-205ENST00000510072 NCAPD3P42695 1498 aa47.49■■■■■ 5.19
TRIM41-205ENST00000510072 BAZ1AQ9NRL2 1556 aaPredicted RBP47.48■■■■■ 5.19
TRIM41-205ENST00000510072 ATAD2BQ9ULI0 1458 aa47.45■■■■■ 5.19
TRIM41-205ENST00000510072 SMARCA2P51531 1590 aa47.35■■■■■ 5.17
TRIM41-205ENST00000510072 HMGXB3Q12766 1538 aa47.26■■■■■ 5.16
TRIM41-205ENST00000510072 PEG3Q9GZU2 1588 aa47.24■■■■■ 5.15
TRIM41-205ENST00000510072 MROH2BQ7Z745 1585 aa47.2■■■■■ 5.15
TRIM41-205ENST00000510072 BAZ1BQ9UIG0 1483 aaKnown RBP46.98■■■■■ 5.11
TRIM41-205ENST00000510072 WIZO95785 1651 aa46.67■■■■■ 5.06
TRIM41-205ENST00000510072 RSF1Q96T23 1441 aaPredicted RBP46.48■■■■■ 5.03
TRIM41-205ENST00000510072 NESP48681 1621 aa46.47■■■■■ 5.03
TRIM41-205ENST00000510072 ERCC6Q03468 1493 aa46.31■■■■■ 5
TRIM41-205ENST00000510072 LAMC3Q9Y6N6 1575 aa46.3■■■■■ 5
TRIM41-205ENST00000510072 TOP2AP11388 1531 aaKnown RBP46.16■■■■■ 4.98
TRIM41-205ENST00000510072 CUX2O14529 1486 aa46.09■■■■■ 4.97
TRIM41-205ENST00000510072 CADPSQ9ULU8 1353 aa46.02■■■■■ 4.96
TRIM41-205ENST00000510072 KIF21AQ7Z4S6 1674 aa45.96■■■■■ 4.95
TRIM41-205ENST00000510072 THOC2Q8NI27 1593 aaKnown RBP45.96■■■■■ 4.95
TRIM41-205ENST00000510072 PDS5BQ9NTI5 1447 aa45.91■■■■■ 4.94
TRIM41-205ENST00000510072 CFTRP13569 1480 aa45.73■■■■■ 4.91
TRIM41-205ENST00000510072 CCDC88BA6NC98 1476 aa45.57■■■■■ 4.89
TRIM41-205ENST00000510072 MRC2Q9UBG0 1479 aa45.54■■■■■ 4.88
TRIM41-205ENST00000510072 FANCD2Q9BXW9 1451 aa45.51■■■■■ 4.88
TRIM41-205ENST00000510072 CEP164Q9UPV0 1460 aa45.49■■■■■ 4.87
TRIM41-205ENST00000510072 WDR62O43379 1518 aa45.47■■■■■ 4.87
TRIM41-205ENST00000510072 PRDM2Q13029 1718 aa45.42■■■■■ 4.86
TRIM41-205ENST00000510072 URB2Q14146 1524 aaKnown RBP45.16■■■■■ 4.82
TRIM41-205ENST00000510072 DNAJC5Q9H3Z4 198 aa45.08■■■■■ 4.81
TRIM41-205ENST00000510072 TOPBP1Q92547 1522 aa44.78■■■■■ 4.76
TRIM41-205ENST00000510072 SUPT5HO00267 1087 aaKnown RBP44.75■■■■■ 4.75
TRIM41-205ENST00000510072 DNMBPQ6XZF7 1577 aa44.71■■■■■ 4.75
TRIM41-205ENST00000510072 ABCC8Q09428 1581 aa44.68■■■■■ 4.74
TRIM41-205ENST00000510072 IFT140Q96RY7 1462 aa44.56■■■■■ 4.72
TRIM41-205ENST00000510072 ZNF608Q9ULD9 1512 aaPredicted RBP44.44■■■■■ 4.7
TRIM41-205ENST00000510072 TARBP1Q13395 1621 aaKnown RBP44.39■■■■■ 4.7
TRIM41-205ENST00000510072 POLA1P09884 1462 aaPredicted RBP44.38■■■■■ 4.69
TRIM41-205ENST00000510072 CUX1P39880 1505 aa44.32■■■■■ 4.69
TRIM41-205ENST00000510072 EIF4G3O43432 1585 aaKnown RBP44.28■■■■■ 4.68
TRIM41-205ENST00000510072 FGD5Q6ZNL6 1462 aa44.19■■■■■ 4.66
TRIM41-205ENST00000510072 RAD54L2Q9Y4B4 1467 aa44.15■■■■■ 4.66
TRIM41-205ENST00000510072 SOGA1O94964 1423 aa44.08■■■■■ 4.65
TRIM41-205ENST00000510072 AQRO60306 1485 aaKnown RBP eCLIP44.07■■■■■ 4.658e-8■■■■■ 28.7
TRIM41-205ENST00000510072 WDR97A6NE52 1622 aa43.99■■■■■ 4.63
TRIM41-205ENST00000510072 OSCARQ8IYS5 282 aa43.94■■■■■ 4.62
TRIM41-205ENST00000510072 TDRD9Q8NDG6 1382 aaKnown RBP43.89■■■■■ 4.62
TRIM41-205ENST00000510072 BIVM-ERCC5R4GMW8 1640 aa43.85■■■■■ 4.61
TRIM41-205ENST00000510072 TOP2BQ02880 1626 aa43.82■■■■■ 4.61
TRIM41-205ENST00000510072 SYNJ1O43426 1573 aa43.8■■■■■ 4.6
TRIM41-205ENST00000510072 CHD1O14646 1710 aa43.8■■■■■ 4.6
TRIM41-205ENST00000510072 WRNQ14191 1432 aaPredicted RBP eCLIP43.79■■■■■ 4.6
TRIM41-205ENST00000510072 ABCA10Q8WWZ4 1543 aa43.76■■■■■ 4.6
TRIM41-205ENST00000510072 ABCA5Q8WWZ7 1642 aa43.69■■■■■ 4.58
TRIM41-205ENST00000510072 SNAPC4Q5SXM2 1469 aa43.69■■■■■ 4.58
TRIM41-205ENST00000510072 GRIN2BQ13224 1484 aa43.67■■■■■ 4.58
TRIM41-205ENST00000510072 PBRM1Q86U86 1689 aa43.64■■■■■ 4.58
TRIM41-205ENST00000510072 MAGI1Q96QZ7 1491 aaPredicted RBP43.63■■■■■ 4.57
TRIM41-205ENST00000510072 GAPVD1Q14C86 1478 aa43.61■■■■■ 4.57
TRIM41-205ENST00000510072 RIMBP3CA6NJZ7 1639 aa43.48■■■■■ 4.55
TRIM41-205ENST00000510072 RIMBP3BA6NNM3 1639 aa43.48■■■■■ 4.55
TRIM41-205ENST00000510072 RIMBP3Q9UFD9 1639 aa43.48■■■■■ 4.55
TRIM41-205ENST00000510072 SYNJ2O15056 1496 aa43.45■■■■■ 4.55
TRIM41-205ENST00000510072 FBLN2P98095 1184 aa43.43■■■■■ 4.54
TRIM41-205ENST00000510072 ARHGEF11O15085 1522 aa43.41■■■■■ 4.54
TRIM41-205ENST00000510072 CLASP1Q7Z460 1538 aa43.36■■■■■ 4.53
TRIM41-205ENST00000510072 CHMP7Q8WUX9 453 aaPredicted RBP43.3■■■■■ 4.52
TRIM41-205ENST00000510072 TRIM41Q8WV44 630 aa43.29■■■■■ 4.52
TRIM41-205ENST00000510072 ADAMTS12P58397 1594 aa43.29■■■■■ 4.52
TRIM41-205ENST00000510072 ERICH3Q5RHP9 1530 aa43.22■■■■■ 4.51
TRIM41-205ENST00000510072 GRIN2AQ12879 1464 aa43.14■■■■■ 4.5
TRIM41-205ENST00000510072 FHAD1B1AJZ9 1412 aa43.09■■■■■ 4.49
TRIM41-205ENST00000510072 ARAP1Q96P48 1450 aa43.06■■■■■ 4.48
TRIM41-205ENST00000510072 NUP160Q12769 1436 aa43■■■■■ 4.47
TRIM41-205ENST00000510072 CEP170Q5SW79 1584 aa42.99■■■■■ 4.47
TRIM41-205ENST00000510072 KIF27Q86VH2 1401 aa42.87■■■■■ 4.45
TRIM41-205ENST00000510072 CYB5RLQ6IPT4 315 aa42.84■■■■■ 4.45
TRIM41-205ENST00000510072 SHROOM2Q13796 1616 aa42.79■■■■■ 4.44
TRIM41-205ENST00000510072 IGF1RP08069 1367 aa42.78■■■■■ 4.44
TRIM41-205ENST00000510072 CUL7Q14999 1698 aa42.76■■■■■ 4.44
TRIM41-205ENST00000510072 ERCC6L2Q5T890 1561 aa42.71■■■■■ 4.43
TRIM41-205ENST00000510072 RUSC2Q8N2Y8 1516 aa42.67■■■■■ 4.42
TRIM41-205ENST00000510072 CARMIL1Q5VZK9 1371 aa42.48■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms