RNA–Protein interactions for RNA: ENST00000510048.1

CXCL2-203, Transcript of C-X-C motif chemokine ligand 2, humanhuman

TSL 3

Gene CXCL2, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL2-203ENST00000510048 NISCHQ9Y2I1 1504 aa46.7■■■■■ 5.07
CXCL2-203ENST00000510048 CCDC180Q9P1Z9 1646 aa41.58■■■■■ 4.25
CXCL2-203ENST00000510048 ABCC9O60706 1549 aa40.83■■■■■ 4.13
CXCL2-203ENST00000510048 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
CXCL2-203ENST00000510048 NACADO15069 1562 aa39.15■■■■□ 3.86
CXCL2-203ENST00000510048 DCAF8L2P0C7V8 631 aa39.05■■■■□ 3.84
CXCL2-203ENST00000510048 MYO15BQ96JP2 1530 aa38.89■■■■□ 3.82
CXCL2-203ENST00000510048 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
CXCL2-203ENST00000510048 DCAF1Q9Y4B6 1507 aa38.65■■■■□ 3.78
CXCL2-203ENST00000510048 UNC13AQ9UPW8 1703 aa38.32■■■■□ 3.73
CXCL2-203ENST00000510048 PABPN1Q86U42 306 aaKnown RBP eCLIP38.13■■■■□ 3.69
CXCL2-203ENST00000510048 BICRAQ9NZM4 1560 aa38.05■■■■□ 3.68
CXCL2-203ENST00000510048 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
CXCL2-203ENST00000510048 DNAJC5BQ9UF47 199 aa37.65■■■■□ 3.62
CXCL2-203ENST00000510048 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
CXCL2-203ENST00000510048 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
CXCL2-203ENST00000510048 CC2D2AQ9P2K1 1620 aa36.94■■■■□ 3.5
CXCL2-203ENST00000510048 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
CXCL2-203ENST00000510048 SMARCA4P51532 1647 aa36.26■■■■□ 3.39
CXCL2-203ENST00000510048 BAZ1AQ9NRL2 1556 aaPredicted RBP36.19■■■■□ 3.38
CXCL2-203ENST00000510048 NCAPD3P42695 1498 aa36.13■■■■□ 3.37
CXCL2-203ENST00000510048 ATAD2BQ9ULI0 1458 aa36.12■■■■□ 3.37
CXCL2-203ENST00000510048 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
CXCL2-203ENST00000510048 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
CXCL2-203ENST00000510048 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
CXCL2-203ENST00000510048 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
CXCL2-203ENST00000510048 BAZ1BQ9UIG0 1483 aaKnown RBP35.8■■■■□ 3.32
CXCL2-203ENST00000510048 WIZO95785 1651 aa35.57■■■■□ 3.28
CXCL2-203ENST00000510048 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
CXCL2-203ENST00000510048 NESP48681 1621 aa35.28■■■■□ 3.24
CXCL2-203ENST00000510048 ERCC6Q03468 1493 aa35.2■■■■□ 3.23
CXCL2-203ENST00000510048 TOP2AP11388 1531 aaKnown RBP35.19■■■■□ 3.22
CXCL2-203ENST00000510048 LAMC3Q9Y6N6 1575 aa35.19■■■■□ 3.22
CXCL2-203ENST00000510048 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.2
CXCL2-203ENST00000510048 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
CXCL2-203ENST00000510048 CUX2O14529 1486 aa34.92■■■■□ 3.18
CXCL2-203ENST00000510048 KIF21AQ7Z4S6 1674 aa34.86■■■■□ 3.17
CXCL2-203ENST00000510048 CFTRP13569 1480 aa34.83■■■■□ 3.17
CXCL2-203ENST00000510048 THOC2Q8NI27 1593 aaKnown RBP34.79■■■■□ 3.16
CXCL2-203ENST00000510048 CCDC88BA6NC98 1476 aa34.79■■■■□ 3.16
CXCL2-203ENST00000510048 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
CXCL2-203ENST00000510048 CEP164Q9UPV0 1460 aa34.61■■■■□ 3.13
CXCL2-203ENST00000510048 MRC2Q9UBG0 1479 aa34.6■■■■□ 3.13
CXCL2-203ENST00000510048 PRDM2Q13029 1718 aa34.53■■■■□ 3.12
CXCL2-203ENST00000510048 WDR62O43379 1518 aa34.5■■■■□ 3.11
CXCL2-203ENST00000510048 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
CXCL2-203ENST00000510048 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
CXCL2-203ENST00000510048 TOPBP1Q92547 1522 aa34.08■■■■□ 3.05
CXCL2-203ENST00000510048 ABCC8Q09428 1581 aa34.07■■■■□ 3.05
CXCL2-203ENST00000510048 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
CXCL2-203ENST00000510048 DNMBPQ6XZF7 1577 aa34.02■■■■□ 3.04
CXCL2-203ENST00000510048 IFT140Q96RY7 1462 aa33.91■■■■□ 3.02
CXCL2-203ENST00000510048 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
CXCL2-203ENST00000510048 CUX1P39880 1505 aa33.76■■■■□ 3
CXCL2-203ENST00000510048 ZNF608Q9ULD9 1512 aaPredicted RBP33.76■■■■□ 3
CXCL2-203ENST00000510048 TARBP1Q13395 1621 aaKnown RBP33.72■■■□□ 2.99
CXCL2-203ENST00000510048 FGD5Q6ZNL6 1462 aa33.66■■■□□ 2.98
CXCL2-203ENST00000510048 SOGA1O94964 1423 aa33.64■■■□□ 2.98
CXCL2-203ENST00000510048 RAD54L2Q9Y4B4 1467 aa33.63■■■□□ 2.97
CXCL2-203ENST00000510048 EIF4G3O43432 1585 aaKnown RBP33.61■■■□□ 2.97
CXCL2-203ENST00000510048 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.96
CXCL2-203ENST00000510048 WRNQ14191 1432 aaPredicted RBP eCLIP33.48■■■□□ 2.95
CXCL2-203ENST00000510048 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
CXCL2-203ENST00000510048 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
CXCL2-203ENST00000510048 OSCARQ8IYS5 282 aa33.45■■■□□ 2.95
CXCL2-203ENST00000510048 TOP2BQ02880 1626 aa33.43■■■□□ 2.94
CXCL2-203ENST00000510048 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
CXCL2-203ENST00000510048 SYNJ1O43426 1573 aa33.4■■■□□ 2.94
CXCL2-203ENST00000510048 ABCA10Q8WWZ4 1543 aa33.35■■■□□ 2.93
CXCL2-203ENST00000510048 GRIN2BQ13224 1484 aa33.27■■■□□ 2.92
CXCL2-203ENST00000510048 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
CXCL2-203ENST00000510048 SNAPC4Q5SXM2 1469 aa33.24■■■□□ 2.91
CXCL2-203ENST00000510048 ABCA5Q8WWZ7 1642 aa33.22■■■□□ 2.91
CXCL2-203ENST00000510048 CHD1O14646 1710 aa33.22■■■□□ 2.91
CXCL2-203ENST00000510048 MAGI1Q96QZ7 1491 aaPredicted RBP33.2■■■□□ 2.91
CXCL2-203ENST00000510048 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
CXCL2-203ENST00000510048 FBLN2P98095 1184 aa33.16■■■□□ 2.9
CXCL2-203ENST00000510048 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
CXCL2-203ENST00000510048 CHMP7Q8WUX9 453 aaPredicted RBP33.07■■■□□ 2.88
CXCL2-203ENST00000510048 ERICH3Q5RHP9 1530 aa32.95■■■□□ 2.87
CXCL2-203ENST00000510048 ADAMTS12P58397 1594 aa32.91■■■□□ 2.86
CXCL2-203ENST00000510048 RIMBP3CA6NJZ7 1639 aa32.91■■■□□ 2.86
CXCL2-203ENST00000510048 RIMBP3BA6NNM3 1639 aa32.91■■■□□ 2.86
CXCL2-203ENST00000510048 RIMBP3Q9UFD9 1639 aa32.91■■■□□ 2.86
CXCL2-203ENST00000510048 ARHGEF11O15085 1522 aa32.88■■■□□ 2.85
CXCL2-203ENST00000510048 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
CXCL2-203ENST00000510048 FHAD1B1AJZ9 1412 aa32.86■■■□□ 2.85
CXCL2-203ENST00000510048 GRIN2AQ12879 1464 aa32.83■■■□□ 2.85
CXCL2-203ENST00000510048 TRIM41Q8WV44 630 aa32.82■■■□□ 2.84
CXCL2-203ENST00000510048 KIF27Q86VH2 1401 aa32.79■■■□□ 2.84
CXCL2-203ENST00000510048 IGF1RP08069 1367 aa32.71■■■□□ 2.83
CXCL2-203ENST00000510048 NUP160Q12769 1436 aa32.71■■■□□ 2.83
CXCL2-203ENST00000510048 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
CXCL2-203ENST00000510048 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
CXCL2-203ENST00000510048 CUL7Q14999 1698 aa32.6■■■□□ 2.81
CXCL2-203ENST00000510048 CYB5RLQ6IPT4 315 aa32.59■■■□□ 2.81
CXCL2-203ENST00000510048 CARMIL1Q5VZK9 1371 aa32.5■■■□□ 2.79
CXCL2-203ENST00000510048 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
CXCL2-203ENST00000510048 RUSC2Q8N2Y8 1516 aa32.45■■■□□ 2.78
CXCL2-203ENST00000510048 ERCC6L2Q5T890 1561 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms