RNA–Protein interactions for RNA: ENST00000510031.1

COX18-205, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

TSL 1 (best)

Gene COX18, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-205ENST00000510031 NISCHQ9Y2I1 1504 aa43.44■■■■■ 4.54
COX18-205ENST00000510031 CCDC180Q9P1Z9 1646 aa38.72■■■■□ 3.79
COX18-205ENST00000510031 ABCC9O60706 1549 aa38.03■■■■□ 3.68
COX18-205ENST00000510031 RB1CC1Q8TDY2 1594 aa36.59■■■■□ 3.45
COX18-205ENST00000510031 NACADO15069 1562 aa36.53■■■■□ 3.44
COX18-205ENST00000510031 DCAF8L2P0C7V8 631 aa36.36■■■■□ 3.41
COX18-205ENST00000510031 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
COX18-205ENST00000510031 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
COX18-205ENST00000510031 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
COX18-205ENST00000510031 PABPN1Q86U42 306 aaKnown RBP eCLIP35.5■■■■□ 3.27
COX18-205ENST00000510031 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
COX18-205ENST00000510031 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
COX18-205ENST00000510031 SHROOM4Q9ULL8 1493 aa35.25■■■■□ 3.23
COX18-205ENST00000510031 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
COX18-205ENST00000510031 DNAJC5BQ9UF47 199 aa35.05■■■■□ 3.2
COX18-205ENST00000510031 EIF4G1Q04637 1599 aaKnown RBP34.51■■■■□ 3.12
COX18-205ENST00000510031 CC2D2AQ9P2K1 1620 aa34.39■■■■□ 3.1
COX18-205ENST00000510031 CECR2Q9BXF3 1484 aa34.27■■■■□ 3.08
COX18-205ENST00000510031 BAZ1AQ9NRL2 1556 aaPredicted RBP33.73■■■□□ 2.99
COX18-205ENST00000510031 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
COX18-205ENST00000510031 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
COX18-205ENST00000510031 SMARCA2P51531 1590 aa33.64■■■□□ 2.98
COX18-205ENST00000510031 ATAD2BQ9ULI0 1458 aa33.64■■■□□ 2.98
COX18-205ENST00000510031 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
COX18-205ENST00000510031 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
COX18-205ENST00000510031 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
COX18-205ENST00000510031 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
COX18-205ENST00000510031 RSF1Q96T23 1441 aaPredicted RBP33.01■■■□□ 2.87
COX18-205ENST00000510031 WIZO95785 1651 aa32.96■■■□□ 2.87
COX18-205ENST00000510031 ERCC6Q03468 1493 aa32.9■■■□□ 2.86
COX18-205ENST00000510031 LAMC3Q9Y6N6 1575 aa32.83■■■□□ 2.85
COX18-205ENST00000510031 NESP48681 1621 aa32.79■■■□□ 2.84
COX18-205ENST00000510031 TOP2AP11388 1531 aaKnown RBP32.73■■■□□ 2.83
COX18-205ENST00000510031 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
COX18-205ENST00000510031 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
COX18-205ENST00000510031 CUX2O14529 1486 aa32.68■■■□□ 2.82
COX18-205ENST00000510031 CFTRP13569 1480 aa32.45■■■□□ 2.79
COX18-205ENST00000510031 THOC2Q8NI27 1593 aaKnown RBP32.38■■■□□ 2.77
COX18-205ENST00000510031 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
COX18-205ENST00000510031 CCDC88BA6NC98 1476 aa32.32■■■□□ 2.76
COX18-205ENST00000510031 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
COX18-205ENST00000510031 MRC2Q9UBG0 1479 aa32.29■■■□□ 2.76
COX18-205ENST00000510031 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
COX18-205ENST00000510031 WDR62O43379 1518 aa32.17■■■□□ 2.74
COX18-205ENST00000510031 PRDM2Q13029 1718 aa32.03■■■□□ 2.72
COX18-205ENST00000510031 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
COX18-205ENST00000510031 URB2Q14146 1524 aaKnown RBP31.92■■■□□ 2.7
COX18-205ENST00000510031 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
COX18-205ENST00000510031 ABCC8Q09428 1581 aa31.86■■■□□ 2.69
COX18-205ENST00000510031 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
COX18-205ENST00000510031 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
COX18-205ENST00000510031 IFT140Q96RY7 1462 aa31.66■■■□□ 2.66
COX18-205ENST00000510031 POLA1P09884 1462 aaPredicted RBP31.44■■■□□ 2.62
COX18-205ENST00000510031 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.62
COX18-205ENST00000510031 CUX1P39880 1505 aa31.35■■■□□ 2.61
COX18-205ENST00000510031 SOGA1O94964 1423 aa31.35■■■□□ 2.61
COX18-205ENST00000510031 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
COX18-205ENST00000510031 FGD5Q6ZNL6 1462 aa31.33■■■□□ 2.61
COX18-205ENST00000510031 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
COX18-205ENST00000510031 EIF4G3O43432 1585 aaKnown RBP31.27■■■□□ 2.6
COX18-205ENST00000510031 WDR97A6NE52 1622 aa31.25■■■□□ 2.59
COX18-205ENST00000510031 RAD54L2Q9Y4B4 1467 aa31.25■■■□□ 2.59
COX18-205ENST00000510031 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.59
COX18-205ENST00000510031 WRNQ14191 1432 aaPredicted RBP eCLIP31.17■■■□□ 2.58
COX18-205ENST00000510031 TDRD9Q8NDG6 1382 aaKnown RBP31.15■■■□□ 2.58
COX18-205ENST00000510031 TOP2BQ02880 1626 aa31.07■■■□□ 2.56
COX18-205ENST00000510031 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
COX18-205ENST00000510031 GRIN2BQ13224 1484 aa31.04■■■□□ 2.56
COX18-205ENST00000510031 BIVM-ERCC5R4GMW8 1640 aa31.03■■■□□ 2.56
COX18-205ENST00000510031 MAGI1Q96QZ7 1491 aaPredicted RBP31■■■□□ 2.55
COX18-205ENST00000510031 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
COX18-205ENST00000510031 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
COX18-205ENST00000510031 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.54
COX18-205ENST00000510031 FBLN2P98095 1184 aa30.94■■■□□ 2.54
COX18-205ENST00000510031 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
COX18-205ENST00000510031 ABCA5Q8WWZ7 1642 aa30.88■■■□□ 2.53
COX18-205ENST00000510031 SYNJ2O15056 1496 aa30.86■■■□□ 2.53
COX18-205ENST00000510031 CHD1O14646 1710 aa30.84■■■□□ 2.53
COX18-205ENST00000510031 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
COX18-205ENST00000510031 ERICH3Q5RHP9 1530 aa30.71■■■□□ 2.51
COX18-205ENST00000510031 ARHGEF11O15085 1522 aa30.68■■■□□ 2.5
COX18-205ENST00000510031 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
COX18-205ENST00000510031 FHAD1B1AJZ9 1412 aa30.66■■■□□ 2.5
COX18-205ENST00000510031 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
COX18-205ENST00000510031 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
COX18-205ENST00000510031 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
COX18-205ENST00000510031 CLASP1Q7Z460 1538 aa30.63■■■□□ 2.49
COX18-205ENST00000510031 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
COX18-205ENST00000510031 GRIN2AQ12879 1464 aa30.6■■■□□ 2.49
COX18-205ENST00000510031 KIF27Q86VH2 1401 aa30.58■■■□□ 2.49
COX18-205ENST00000510031 NUP160Q12769 1436 aa30.5■■■□□ 2.47
COX18-205ENST00000510031 IGF1RP08069 1367 aa30.43■■■□□ 2.46
COX18-205ENST00000510031 CYB5RLQ6IPT4 315 aa30.43■■■□□ 2.46
COX18-205ENST00000510031 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
COX18-205ENST00000510031 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
COX18-205ENST00000510031 CUL7Q14999 1698 aa30.34■■■□□ 2.45
COX18-205ENST00000510031 CARMIL1Q5VZK9 1371 aa30.27■■■□□ 2.44
COX18-205ENST00000510031 SHROOM2Q13796 1616 aa30.22■■■□□ 2.43
COX18-205ENST00000510031 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
COX18-205ENST00000510031 KIAA0586Q9BVV6 1533 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms