RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 NISCHQ9Y2I1 1504 aa37.04■■■■□ 3.52
APBB3-214ENST00000509914 CCDC180Q9P1Z9 1646 aa32.54■■■□□ 2.8
APBB3-214ENST00000509914 ABCC9O60706 1549 aa31.31■■■□□ 2.6
APBB3-214ENST00000509914 ZCCHC6Q5VYS8 1495 aaKnown RBP31■■■□□ 2.55
APBB3-214ENST00000509914 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
APBB3-214ENST00000509914 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
APBB3-214ENST00000509914 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
APBB3-214ENST00000509914 NACADO15069 1562 aa30.46■■■□□ 2.47
APBB3-214ENST00000509914 RB1CC1Q8TDY2 1594 aa30.33■■■□□ 2.45
APBB3-214ENST00000509914 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
APBB3-214ENST00000509914 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
APBB3-214ENST00000509914 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
APBB3-214ENST00000509914 BICRAQ9NZM4 1560 aa29.46■■■□□ 2.31
APBB3-214ENST00000509914 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
APBB3-214ENST00000509914 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
APBB3-214ENST00000509914 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
APBB3-214ENST00000509914 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
APBB3-214ENST00000509914 MROH2BQ7Z745 1585 aa28.6■■■□□ 2.17
APBB3-214ENST00000509914 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
APBB3-214ENST00000509914 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
APBB3-214ENST00000509914 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
APBB3-214ENST00000509914 CC2D2AQ9P2K1 1620 aa28.31■■■□□ 2.12
APBB3-214ENST00000509914 WIZO95785 1651 aa28.3■■■□□ 2.12
APBB3-214ENST00000509914 ATAD2BQ9ULI0 1458 aa28.29■■■□□ 2.12
APBB3-214ENST00000509914 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
APBB3-214ENST00000509914 SMARCA2P51531 1590 aa28.22■■■□□ 2.11
APBB3-214ENST00000509914 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.11
APBB3-214ENST00000509914 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
APBB3-214ENST00000509914 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
APBB3-214ENST00000509914 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
APBB3-214ENST00000509914 TOP2AP11388 1531 aaKnown RBP28.01■■■□□ 2.07
APBB3-214ENST00000509914 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
APBB3-214ENST00000509914 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
APBB3-214ENST00000509914 CFTRP13569 1480 aa27.35■■□□□ 1.97
APBB3-214ENST00000509914 NESP48681 1621 aa27.31■■□□□ 1.96
APBB3-214ENST00000509914 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
APBB3-214ENST00000509914 PRDM2Q13029 1718 aa27.08■■□□□ 1.93
APBB3-214ENST00000509914 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
APBB3-214ENST00000509914 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
APBB3-214ENST00000509914 KIF21AQ7Z4S6 1674 aa26.93■■□□□ 1.9
APBB3-214ENST00000509914 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
APBB3-214ENST00000509914 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
APBB3-214ENST00000509914 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
APBB3-214ENST00000509914 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
APBB3-214ENST00000509914 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
APBB3-214ENST00000509914 CUX1P39880 1505 aa26.77■■□□□ 1.88
APBB3-214ENST00000509914 URB2Q14146 1524 aaKnown RBP26.76■■□□□ 1.87
APBB3-214ENST00000509914 MRC2Q9UBG0 1479 aa26.75■■□□□ 1.87
APBB3-214ENST00000509914 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
APBB3-214ENST00000509914 TOPBP1Q92547 1522 aa26.7■■□□□ 1.86
APBB3-214ENST00000509914 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
APBB3-214ENST00000509914 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
APBB3-214ENST00000509914 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
APBB3-214ENST00000509914 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
APBB3-214ENST00000509914 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
APBB3-214ENST00000509914 WDR62O43379 1518 aa26.64■■□□□ 1.86
APBB3-214ENST00000509914 FGD5Q6ZNL6 1462 aa26.56■■□□□ 1.84
APBB3-214ENST00000509914 POLA1P09884 1462 aaPredicted RBP26.53■■□□□ 1.84
APBB3-214ENST00000509914 CUX2O14529 1486 aa26.45■■□□□ 1.82
APBB3-214ENST00000509914 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
APBB3-214ENST00000509914 SOGA1O94964 1423 aa26.43■■□□□ 1.82
APBB3-214ENST00000509914 TARBP1Q13395 1621 aaKnown RBP26.35■■□□□ 1.81
APBB3-214ENST00000509914 IFT140Q96RY7 1462 aa26.34■■□□□ 1.81
APBB3-214ENST00000509914 ABCA10Q8WWZ4 1543 aa26.33■■□□□ 1.8
APBB3-214ENST00000509914 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
APBB3-214ENST00000509914 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
APBB3-214ENST00000509914 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
APBB3-214ENST00000509914 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
APBB3-214ENST00000509914 KIF27Q86VH2 1401 aa26.21■■□□□ 1.79
APBB3-214ENST00000509914 FAM9AQ8IZU1 332 aaPredicted RBP26.18■■□□□ 1.78
APBB3-214ENST00000509914 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.782e-6■■■■■ 39.8
APBB3-214ENST00000509914 ABCA5Q8WWZ7 1642 aa26.15■■□□□ 1.78
APBB3-214ENST00000509914 EEA1Q15075 1411 aa26.13■■□□□ 1.77
APBB3-214ENST00000509914 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
APBB3-214ENST00000509914 EIF4G3O43432 1585 aaKnown RBP26.09■■□□□ 1.77
APBB3-214ENST00000509914 IGF1RP08069 1367 aa26.07■■□□□ 1.76
APBB3-214ENST00000509914 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
APBB3-214ENST00000509914 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
APBB3-214ENST00000509914 ERICH3Q5RHP9 1530 aa25.99■■□□□ 1.75
APBB3-214ENST00000509914 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
APBB3-214ENST00000509914 SNAPC4Q5SXM2 1469 aa25.91■■□□□ 1.74
APBB3-214ENST00000509914 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
APBB3-214ENST00000509914 CARMIL1Q5VZK9 1371 aa25.9■■□□□ 1.74
APBB3-214ENST00000509914 CUL7Q14999 1698 aa25.86■■□□□ 1.73
APBB3-214ENST00000509914 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
APBB3-214ENST00000509914 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
APBB3-214ENST00000509914 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
APBB3-214ENST00000509914 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
APBB3-214ENST00000509914 KIF21BO75037 1637 aa25.82■■□□□ 1.72
APBB3-214ENST00000509914 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
APBB3-214ENST00000509914 LOC105371045A0A1W2PR82 267 aa25.81■■□□□ 1.72
APBB3-214ENST00000509914 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
APBB3-214ENST00000509914 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
APBB3-214ENST00000509914 CHMP7Q8WUX9 453 aaPredicted RBP25.72■■□□□ 1.71
APBB3-214ENST00000509914 FBLN2P98095 1184 aa25.71■■□□□ 1.71
APBB3-214ENST00000509914 GRIN2AQ12879 1464 aa25.69■■□□□ 1.7
APBB3-214ENST00000509914 UBTFP17480 764 aaKnown RBP25.64■■□□□ 1.69
APBB3-214ENST00000509914 CHD1O14646 1710 aa25.61■■□□□ 1.69
APBB3-214ENST00000509914 TNIKQ9UKE5 1360 aa25.57■■□□□ 1.68
APBB3-214ENST00000509914 NUP160Q12769 1436 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms