RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 NISCHQ9Y2I1 1504 aa28.29■■■□□ 2.12
PRDM16-205ENST00000509860 CCDC180Q9P1Z9 1646 aa24.59■■□□□ 1.53
PRDM16-205ENST00000509860 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
PRDM16-205ENST00000509860 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
PRDM16-205ENST00000509860 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
PRDM16-205ENST00000509860 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
PRDM16-205ENST00000509860 ABCC9O60706 1549 aa23.03■■□□□ 1.28
PRDM16-205ENST00000509860 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
PRDM16-205ENST00000509860 NACADO15069 1562 aa22.76■■□□□ 1.23
PRDM16-205ENST00000509860 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
PRDM16-205ENST00000509860 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
PRDM16-205ENST00000509860 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
PRDM16-205ENST00000509860 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
PRDM16-205ENST00000509860 BICRAQ9NZM4 1560 aa22.07■■□□□ 1.12
PRDM16-205ENST00000509860 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
PRDM16-205ENST00000509860 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
PRDM16-205ENST00000509860 MROH2BQ7Z745 1585 aa21.94■■□□□ 1.1
PRDM16-205ENST00000509860 WIZO95785 1651 aa21.82■■□□□ 1.08
PRDM16-205ENST00000509860 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
PRDM16-205ENST00000509860 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
PRDM16-205ENST00000509860 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
PRDM16-205ENST00000509860 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
PRDM16-205ENST00000509860 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
PRDM16-205ENST00000509860 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
PRDM16-205ENST00000509860 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
PRDM16-205ENST00000509860 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
PRDM16-205ENST00000509860 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
PRDM16-205ENST00000509860 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
PRDM16-205ENST00000509860 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
PRDM16-205ENST00000509860 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
PRDM16-205ENST00000509860 NCAPD3P42695 1498 aa21.02■□□□□ 0.95
PRDM16-205ENST00000509860 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
PRDM16-205ENST00000509860 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
PRDM16-205ENST00000509860 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
PRDM16-205ENST00000509860 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
PRDM16-205ENST00000509860 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
PRDM16-205ENST00000509860 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
PRDM16-205ENST00000509860 CFTRP13569 1480 aa20.64■□□□□ 0.89
PRDM16-205ENST00000509860 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
PRDM16-205ENST00000509860 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.89
PRDM16-205ENST00000509860 SOGA1O94964 1423 aa20.56■□□□□ 0.88
PRDM16-205ENST00000509860 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
PRDM16-205ENST00000509860 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
PRDM16-205ENST00000509860 RUSC2Q8N2Y8 1516 aa20.56■□□□□ 0.88
PRDM16-205ENST00000509860 CUX1P39880 1505 aa20.5■□□□□ 0.87
PRDM16-205ENST00000509860 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
PRDM16-205ENST00000509860 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
PRDM16-205ENST00000509860 NESP48681 1621 aa20.39■□□□□ 0.85
PRDM16-205ENST00000509860 EEA1Q15075 1411 aa20.32■□□□□ 0.84
PRDM16-205ENST00000509860 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
PRDM16-205ENST00000509860 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
PRDM16-205ENST00000509860 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
PRDM16-205ENST00000509860 KIF21BO75037 1637 aa20.26■□□□□ 0.83
PRDM16-205ENST00000509860 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
PRDM16-205ENST00000509860 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
PRDM16-205ENST00000509860 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
PRDM16-205ENST00000509860 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
PRDM16-205ENST00000509860 GOLGA3Q08378 1498 aa20.14■□□□□ 0.81
PRDM16-205ENST00000509860 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
PRDM16-205ENST00000509860 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
PRDM16-205ENST00000509860 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
PRDM16-205ENST00000509860 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
PRDM16-205ENST00000509860 TNIKQ9UKE5 1360 aa20.11■□□□□ 0.81
PRDM16-205ENST00000509860 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
PRDM16-205ENST00000509860 WDR97A6NE52 1622 aa20.08■□□□□ 0.81
PRDM16-205ENST00000509860 CEP162Q5TB80 1403 aa20.08■□□□□ 0.8
PRDM16-205ENST00000509860 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
PRDM16-205ENST00000509860 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
PRDM16-205ENST00000509860 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
PRDM16-205ENST00000509860 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
PRDM16-205ENST00000509860 CUX2O14529 1486 aa19.99■□□□□ 0.79
PRDM16-205ENST00000509860 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
PRDM16-205ENST00000509860 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
PRDM16-205ENST00000509860 IGF1RP08069 1367 aa19.93■□□□□ 0.78
PRDM16-205ENST00000509860 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
PRDM16-205ENST00000509860 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
PRDM16-205ENST00000509860 UBTFP17480 764 aaKnown RBP19.89■□□□□ 0.77
PRDM16-205ENST00000509860 PCGF6Q9BYE7 350 aa19.88■□□□□ 0.77
PRDM16-205ENST00000509860 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
PRDM16-205ENST00000509860 CLIP1P30622 1438 aa19.81■□□□□ 0.76
PRDM16-205ENST00000509860 WDR62O43379 1518 aa19.81■□□□□ 0.76
PRDM16-205ENST00000509860 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
PRDM16-205ENST00000509860 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
PRDM16-205ENST00000509860 CUL7Q14999 1698 aa19.78■□□□□ 0.76
PRDM16-205ENST00000509860 TRIM26Q12899 539 aaPredicted RBP19.76■□□□□ 0.75
PRDM16-205ENST00000509860 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
PRDM16-205ENST00000509860 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
PRDM16-205ENST00000509860 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
PRDM16-205ENST00000509860 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
PRDM16-205ENST00000509860 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
PRDM16-205ENST00000509860 ARHGAP35Q9NRY4 1499 aa19.69■□□□□ 0.74
PRDM16-205ENST00000509860 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
PRDM16-205ENST00000509860 CTTNBP2Q8WZ74 1663 aa19.68■□□□□ 0.74
PRDM16-205ENST00000509860 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
PRDM16-205ENST00000509860 RANGAP1P46060 587 aaPredicted RBP19.61■□□□□ 0.73
PRDM16-205ENST00000509860 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
PRDM16-205ENST00000509860 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
PRDM16-205ENST00000509860 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
PRDM16-205ENST00000509860 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
PRDM16-205ENST00000509860 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms