RNA–Protein interactions for RNA: ENST00000509765.1

SPOP-215, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 613 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-215ENST00000509765 NISCHQ9Y2I1 1504 aa39.73■■■■□ 3.95
SPOP-215ENST00000509765 ABCC9O60706 1549 aa35.78■■■■□ 3.32
SPOP-215ENST00000509765 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.29
SPOP-215ENST00000509765 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
SPOP-215ENST00000509765 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
SPOP-215ENST00000509765 NACADO15069 1562 aa33.65■■■□□ 2.98
SPOP-215ENST00000509765 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
SPOP-215ENST00000509765 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
SPOP-215ENST00000509765 UNC13AQ9UPW8 1703 aa33.19■■■□□ 2.9
SPOP-215ENST00000509765 MYO15BQ96JP2 1530 aa33.16■■■□□ 2.9
SPOP-215ENST00000509765 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
SPOP-215ENST00000509765 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
SPOP-215ENST00000509765 DCAF1Q9Y4B6 1507 aa32.74■■■□□ 2.83
SPOP-215ENST00000509765 SCRIBQ14160 1630 aa32.52■■■□□ 2.8
SPOP-215ENST00000509765 SHROOM4Q9ULL8 1493 aa32.4■■■□□ 2.78
SPOP-215ENST00000509765 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.76
SPOP-215ENST00000509765 CECR2Q9BXF3 1484 aa32.18■■■□□ 2.74
SPOP-215ENST00000509765 EIF4G1Q04637 1599 aaKnown RBP32.18■■■□□ 2.74
SPOP-215ENST00000509765 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
SPOP-215ENST00000509765 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
SPOP-215ENST00000509765 SMARCA4P51532 1647 aa30.99■■■□□ 2.55
SPOP-215ENST00000509765 SMARCA2P51531 1590 aa30.88■■■□□ 2.53
SPOP-215ENST00000509765 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
SPOP-215ENST00000509765 DNAJC5Q9H3Z4 198 aa30.85■■■□□ 2.53
SPOP-215ENST00000509765 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
SPOP-215ENST00000509765 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
SPOP-215ENST00000509765 NESP48681 1621 aa30.76■■■□□ 2.51
SPOP-215ENST00000509765 CUX2O14529 1486 aa30.73■■■□□ 2.51
SPOP-215ENST00000509765 BAZ1BQ9UIG0 1483 aaKnown RBP30.7■■■□□ 2.51
SPOP-215ENST00000509765 MROH2BQ7Z745 1585 aa30.67■■■□□ 2.5
SPOP-215ENST00000509765 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
SPOP-215ENST00000509765 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
SPOP-215ENST00000509765 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
SPOP-215ENST00000509765 WIZO95785 1651 aa30.28■■■□□ 2.44
SPOP-215ENST00000509765 KIF21AQ7Z4S6 1674 aa30.27■■■□□ 2.44
SPOP-215ENST00000509765 PDS5BQ9NTI5 1447 aa30.2■■■□□ 2.42
SPOP-215ENST00000509765 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
SPOP-215ENST00000509765 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
SPOP-215ENST00000509765 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
SPOP-215ENST00000509765 WDR62O43379 1518 aa29.93■■■□□ 2.38
SPOP-215ENST00000509765 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
SPOP-215ENST00000509765 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
SPOP-215ENST00000509765 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
SPOP-215ENST00000509765 CFTRP13569 1480 aa29.83■■■□□ 2.37
SPOP-215ENST00000509765 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
SPOP-215ENST00000509765 CCDC88BA6NC98 1476 aa29.56■■■□□ 2.32
SPOP-215ENST00000509765 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
SPOP-215ENST00000509765 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
SPOP-215ENST00000509765 OSCARQ8IYS5 282 aa29.34■■■□□ 2.29
SPOP-215ENST00000509765 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
SPOP-215ENST00000509765 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
SPOP-215ENST00000509765 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
SPOP-215ENST00000509765 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
SPOP-215ENST00000509765 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
SPOP-215ENST00000509765 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
SPOP-215ENST00000509765 TARBP1Q13395 1621 aaKnown RBP29.04■■■□□ 2.24
SPOP-215ENST00000509765 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.242e-7■■■■□ 26.5
SPOP-215ENST00000509765 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
SPOP-215ENST00000509765 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
SPOP-215ENST00000509765 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
SPOP-215ENST00000509765 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
SPOP-215ENST00000509765 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
SPOP-215ENST00000509765 ARHGEF11O15085 1522 aa28.92■■■□□ 2.22
SPOP-215ENST00000509765 CHD1O14646 1710 aa28.86■■■□□ 2.21
SPOP-215ENST00000509765 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
SPOP-215ENST00000509765 SOGA1O94964 1423 aa28.85■■■□□ 2.21
SPOP-215ENST00000509765 FGD5Q6ZNL6 1462 aa28.81■■■□□ 2.2
SPOP-215ENST00000509765 CUX1P39880 1505 aa28.8■■■□□ 2.2
SPOP-215ENST00000509765 FBLN2P98095 1184 aa28.8■■■□□ 2.2
SPOP-215ENST00000509765 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
SPOP-215ENST00000509765 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
SPOP-215ENST00000509765 ARAP1Q96P48 1450 aa28.66■■■□□ 2.18
SPOP-215ENST00000509765 SUPT5HO00267 1087 aaKnown RBP28.65■■■□□ 2.18
SPOP-215ENST00000509765 WDR97A6NE52 1622 aa28.6■■■□□ 2.17
SPOP-215ENST00000509765 GRIN2BQ13224 1484 aa28.57■■■□□ 2.16
SPOP-215ENST00000509765 CLASP1Q7Z460 1538 aa28.56■■■□□ 2.16
SPOP-215ENST00000509765 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
SPOP-215ENST00000509765 CHMP7Q8WUX9 453 aaPredicted RBP28.54■■■□□ 2.16
SPOP-215ENST00000509765 SYNJ2O15056 1496 aa28.48■■■□□ 2.15
SPOP-215ENST00000509765 GAPVD1Q14C86 1478 aa28.47■■■□□ 2.15
SPOP-215ENST00000509765 SYNJ1O43426 1573 aa28.45■■■□□ 2.15
SPOP-215ENST00000509765 PBRM1Q86U86 1689 aa28.45■■■□□ 2.14
SPOP-215ENST00000509765 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
SPOP-215ENST00000509765 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
SPOP-215ENST00000509765 TRHP20396 242 aaPredicted RBP28.38■■■□□ 2.13
SPOP-215ENST00000509765 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
SPOP-215ENST00000509765 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
SPOP-215ENST00000509765 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
SPOP-215ENST00000509765 GRIN2AQ12879 1464 aa28.22■■■□□ 2.11
SPOP-215ENST00000509765 ERCC6L2Q5T890 1561 aa28.21■■■□□ 2.11
SPOP-215ENST00000509765 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
SPOP-215ENST00000509765 CEP170Q5SW79 1584 aa28.17■■■□□ 2.1
SPOP-215ENST00000509765 NUP160Q12769 1436 aa28.14■■■□□ 2.1
SPOP-215ENST00000509765 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
SPOP-215ENST00000509765 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
SPOP-215ENST00000509765 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
SPOP-215ENST00000509765 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
SPOP-215ENST00000509765 JPH4Q96JJ6 628 aa27.84■■■□□ 2.05
SPOP-215ENST00000509765 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
SPOP-215ENST00000509765 IGF1RP08069 1367 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms