RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 NISCHQ9Y2I1 1504 aa36.56■■■■□ 3.44
HTT-207ENST00000509751 CCDC180Q9P1Z9 1646 aa32.42■■■□□ 2.78
HTT-207ENST00000509751 ABCC9O60706 1549 aa31.84■■■□□ 2.69
HTT-207ENST00000509751 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
HTT-207ENST00000509751 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
HTT-207ENST00000509751 NACADO15069 1562 aa30.49■■■□□ 2.47
HTT-207ENST00000509751 ZCCHC6Q5VYS8 1495 aaKnown RBP30.47■■■□□ 2.47
HTT-207ENST00000509751 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
HTT-207ENST00000509751 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
HTT-207ENST00000509751 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
HTT-207ENST00000509751 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.36
HTT-207ENST00000509751 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
HTT-207ENST00000509751 BICRAQ9NZM4 1560 aa29.63■■■□□ 2.33
HTT-207ENST00000509751 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
HTT-207ENST00000509751 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
HTT-207ENST00000509751 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
HTT-207ENST00000509751 CC2D2AQ9P2K1 1620 aa28.72■■■□□ 2.19
HTT-207ENST00000509751 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
HTT-207ENST00000509751 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
HTT-207ENST00000509751 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.12
HTT-207ENST00000509751 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
HTT-207ENST00000509751 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
HTT-207ENST00000509751 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
HTT-207ENST00000509751 NCAPD3P42695 1498 aa28.14■■■□□ 2.09
HTT-207ENST00000509751 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
HTT-207ENST00000509751 HMGXB3Q12766 1538 aa28.01■■■□□ 2.07
HTT-207ENST00000509751 BAZ1BQ9UIG0 1483 aaKnown RBP28.01■■■□□ 2.07
HTT-207ENST00000509751 WIZO95785 1651 aa27.93■■■□□ 2.06
HTT-207ENST00000509751 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
HTT-207ENST00000509751 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
HTT-207ENST00000509751 NESP48681 1621 aa27.56■■■□□ 2
HTT-207ENST00000509751 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
HTT-207ENST00000509751 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
HTT-207ENST00000509751 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
HTT-207ENST00000509751 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
HTT-207ENST00000509751 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
HTT-207ENST00000509751 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
HTT-207ENST00000509751 CFTRP13569 1480 aa27.19■■□□□ 1.94
HTT-207ENST00000509751 KIF21AQ7Z4S6 1674 aa27.18■■□□□ 1.94
HTT-207ENST00000509751 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
HTT-207ENST00000509751 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
HTT-207ENST00000509751 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
HTT-207ENST00000509751 CUX2O14529 1486 aa27.02■■□□□ 1.92
HTT-207ENST00000509751 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
HTT-207ENST00000509751 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
HTT-207ENST00000509751 WDR62O43379 1518 aa26.85■■□□□ 1.89
HTT-207ENST00000509751 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
HTT-207ENST00000509751 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
HTT-207ENST00000509751 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
HTT-207ENST00000509751 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
HTT-207ENST00000509751 CUX1P39880 1505 aa26.47■■□□□ 1.83
HTT-207ENST00000509751 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
HTT-207ENST00000509751 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
HTT-207ENST00000509751 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
HTT-207ENST00000509751 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
HTT-207ENST00000509751 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
HTT-207ENST00000509751 SOGA1O94964 1423 aa26.32■■□□□ 1.8
HTT-207ENST00000509751 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
HTT-207ENST00000509751 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
HTT-207ENST00000509751 SYNJ1O43426 1573 aa26.26■■□□□ 1.79
HTT-207ENST00000509751 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
HTT-207ENST00000509751 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.79
HTT-207ENST00000509751 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
HTT-207ENST00000509751 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
HTT-207ENST00000509751 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
HTT-207ENST00000509751 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
HTT-207ENST00000509751 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
HTT-207ENST00000509751 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
HTT-207ENST00000509751 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
HTT-207ENST00000509751 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
HTT-207ENST00000509751 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
HTT-207ENST00000509751 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
HTT-207ENST00000509751 FBLN2P98095 1184 aa25.96■■□□□ 1.75
HTT-207ENST00000509751 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
HTT-207ENST00000509751 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
HTT-207ENST00000509751 CHD1O14646 1710 aa25.9■■□□□ 1.74
HTT-207ENST00000509751 MAGI1Q96QZ7 1491 aaPredicted RBP25.89■■□□□ 1.73
HTT-207ENST00000509751 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
HTT-207ENST00000509751 SYNJ2O15056 1496 aa25.81■■□□□ 1.72
HTT-207ENST00000509751 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
HTT-207ENST00000509751 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
HTT-207ENST00000509751 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
HTT-207ENST00000509751 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
HTT-207ENST00000509751 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.7
HTT-207ENST00000509751 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
HTT-207ENST00000509751 IGF1RP08069 1367 aa25.64■■□□□ 1.69
HTT-207ENST00000509751 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
HTT-207ENST00000509751 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
HTT-207ENST00000509751 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
HTT-207ENST00000509751 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
HTT-207ENST00000509751 RIMBP3CA6NJZ7 1639 aa25.54■■□□□ 1.68
HTT-207ENST00000509751 RIMBP3BA6NNM3 1639 aa25.54■■□□□ 1.68
HTT-207ENST00000509751 RIMBP3Q9UFD9 1639 aa25.54■■□□□ 1.68
HTT-207ENST00000509751 CUL7Q14999 1698 aa25.53■■□□□ 1.68
HTT-207ENST00000509751 NUP160Q12769 1436 aa25.53■■□□□ 1.68
HTT-207ENST00000509751 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
HTT-207ENST00000509751 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
HTT-207ENST00000509751 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
HTT-207ENST00000509751 CYB5RLQ6IPT4 315 aa25.35■■□□□ 1.65
HTT-207ENST00000509751 RAPGEF2Q9Y4G8 1499 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms