RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
SSBP2-213ENST00000509743 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
SSBP2-213ENST00000509743 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
SSBP2-213ENST00000509743 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.1
SSBP2-213ENST00000509743 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
SSBP2-213ENST00000509743 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
SSBP2-213ENST00000509743 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
SSBP2-213ENST00000509743 ABCC9O60706 1549 aa14.12□□□□□ -0.15
SSBP2-213ENST00000509743 NACADO15069 1562 aa14.06□□□□□ -0.16
SSBP2-213ENST00000509743 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
SSBP2-213ENST00000509743 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
SSBP2-213ENST00000509743 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
SSBP2-213ENST00000509743 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-213ENST00000509743 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
SSBP2-213ENST00000509743 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
SSBP2-213ENST00000509743 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
SSBP2-213ENST00000509743 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
SSBP2-213ENST00000509743 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
SSBP2-213ENST00000509743 SMARCA4P51532 1647 aa13.33□□□□□ -0.28
SSBP2-213ENST00000509743 PABPN1Q86U42 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSBP2-213ENST00000509743 CHIC1Q5VXU3 224 aa13.32□□□□□ -0.28
SSBP2-213ENST00000509743 WIZO95785 1651 aa13.27□□□□□ -0.29
SSBP2-213ENST00000509743 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
SSBP2-213ENST00000509743 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
SSBP2-213ENST00000509743 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
SSBP2-213ENST00000509743 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
SSBP2-213ENST00000509743 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
SSBP2-213ENST00000509743 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
SSBP2-213ENST00000509743 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
SSBP2-213ENST00000509743 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
SSBP2-213ENST00000509743 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
SSBP2-213ENST00000509743 NCAPD3P42695 1498 aa12.99□□□□□ -0.33
SSBP2-213ENST00000509743 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
SSBP2-213ENST00000509743 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
SSBP2-213ENST00000509743 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
SSBP2-213ENST00000509743 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
SSBP2-213ENST00000509743 EEA1Q15075 1411 aa12.75□□□□□ -0.37
SSBP2-213ENST00000509743 CFTRP13569 1480 aa12.74□□□□□ -0.37
SSBP2-213ENST00000509743 FAM9AQ8IZU1 332 aaPredicted RBP12.71□□□□□ -0.37
SSBP2-213ENST00000509743 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
SSBP2-213ENST00000509743 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
SSBP2-213ENST00000509743 SOGA1O94964 1423 aa12.63□□□□□ -0.39
SSBP2-213ENST00000509743 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
SSBP2-213ENST00000509743 BIVM-ERCC5R4GMW8 1640 aa12.6□□□□□ -0.39
SSBP2-213ENST00000509743 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
SSBP2-213ENST00000509743 CUX1P39880 1505 aa12.56□□□□□ -0.4
SSBP2-213ENST00000509743 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
SSBP2-213ENST00000509743 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
SSBP2-213ENST00000509743 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
SSBP2-213ENST00000509743 TNIKQ9UKE5 1360 aa12.53□□□□□ -0.4
SSBP2-213ENST00000509743 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
SSBP2-213ENST00000509743 FANCD2Q9BXW9 1451 aa12.51□□□□□ -0.41
SSBP2-213ENST00000509743 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
SSBP2-213ENST00000509743 KIF21BO75037 1637 aa12.5□□□□□ -0.41
SSBP2-213ENST00000509743 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
SSBP2-213ENST00000509743 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
SSBP2-213ENST00000509743 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
SSBP2-213ENST00000509743 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
SSBP2-213ENST00000509743 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
SSBP2-213ENST00000509743 NESP48681 1621 aa12.42□□□□□ -0.42
SSBP2-213ENST00000509743 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
SSBP2-213ENST00000509743 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
SSBP2-213ENST00000509743 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
SSBP2-213ENST00000509743 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
SSBP2-213ENST00000509743 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
SSBP2-213ENST00000509743 TOPBP1Q92547 1522 aa12.38□□□□□ -0.43
SSBP2-213ENST00000509743 RAPGEF2Q9Y4G8 1499 aa12.38□□□□□ -0.43
SSBP2-213ENST00000509743 CUX2O14529 1486 aa12.37□□□□□ -0.43
SSBP2-213ENST00000509743 AEBP2Q6ZN18 517 aaPredicted RBP12.36□□□□□ -0.43
SSBP2-213ENST00000509743 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
SSBP2-213ENST00000509743 DNAJC5BQ9UF47 199 aa12.34□□□□□ -0.43
SSBP2-213ENST00000509743 ABCA10Q8WWZ4 1543 aa12.33□□□□□ -0.44
SSBP2-213ENST00000509743 CLIP1P30622 1438 aa12.33□□□□□ -0.44
SSBP2-213ENST00000509743 POLA1P09884 1462 aaPredicted RBP12.33□□□□□ -0.44
SSBP2-213ENST00000509743 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
SSBP2-213ENST00000509743 IGF1RP08069 1367 aa12.31□□□□□ -0.44
SSBP2-213ENST00000509743 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
SSBP2-213ENST00000509743 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
SSBP2-213ENST00000509743 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
SSBP2-213ENST00000509743 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
SSBP2-213ENST00000509743 KIF21AQ7Z4S6 1674 aa12.21□□□□□ -0.45
SSBP2-213ENST00000509743 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
SSBP2-213ENST00000509743 CUL7Q14999 1698 aa12.19□□□□□ -0.46
SSBP2-213ENST00000509743 HRCP23327 699 aa12.18□□□□□ -0.46
SSBP2-213ENST00000509743 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
SSBP2-213ENST00000509743 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
SSBP2-213ENST00000509743 WDR62O43379 1518 aa12.16□□□□□ -0.46
SSBP2-213ENST00000509743 ARAP1Q96P48 1450 aa12.16□□□□□ -0.46
SSBP2-213ENST00000509743 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
SSBP2-213ENST00000509743 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.46
SSBP2-213ENST00000509743 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
SSBP2-213ENST00000509743 APLP2Q06481 763 aa12.14□□□□□ -0.47
SSBP2-213ENST00000509743 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
SSBP2-213ENST00000509743 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
SSBP2-213ENST00000509743 PPARGC1BQ86YN6 1023 aaKnown RBP12.11□□□□□ -0.47
SSBP2-213ENST00000509743 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
SSBP2-213ENST00000509743 EFCAB5A4FU69 1503 aa12.08□□□□□ -0.48
SSBP2-213ENST00000509743 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
SSBP2-213ENST00000509743 FHAD1B1AJZ9 1412 aa12.07□□□□□ -0.48
SSBP2-213ENST00000509743 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms