RNA–Protein interactions for RNA: ENST00000509732.5

APC-209, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 4

Gene APC, Length 524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-209ENST00000509732 NISCHQ9Y2I1 1504 aa53.61■■■■■ 6.17
APC-209ENST00000509732 ABCC9O60706 1549 aa48.07■■■■■ 5.29
APC-209ENST00000509732 CCDC180Q9P1Z9 1646 aa48.01■■■■■ 5.28
APC-209ENST00000509732 RB1CC1Q8TDY2 1594 aa45.7■■■■■ 4.91
APC-209ENST00000509732 NACADO15069 1562 aa45.41■■■■■ 4.86
APC-209ENST00000509732 DNAJC5BQ9UF47 199 aa45.2■■■■■ 4.83
APC-209ENST00000509732 DCAF8L2P0C7V8 631 aa45.14■■■■■ 4.82
APC-209ENST00000509732 MYO15BQ96JP2 1530 aa44.85■■■■■ 4.77
APC-209ENST00000509732 PABPN1Q86U42 306 aaKnown RBP eCLIP44.78■■■■■ 4.76
APC-209ENST00000509732 UNC13AQ9UPW8 1703 aa44.66■■■■■ 4.74
APC-209ENST00000509732 BICRAQ9NZM4 1560 aa44.49■■■■■ 4.71
APC-209ENST00000509732 ZCCHC6Q5VYS8 1495 aaKnown RBP44.45■■■■■ 4.71
APC-209ENST00000509732 DCAF1Q9Y4B6 1507 aa44.28■■■■■ 4.68
APC-209ENST00000509732 SHROOM4Q9ULL8 1493 aa43.81■■■■■ 4.6
APC-209ENST00000509732 SCRIBQ14160 1630 aa43.78■■■■■ 4.6
APC-209ENST00000509732 CC2D2AQ9P2K1 1620 aa43.4■■■■■ 4.54
APC-209ENST00000509732 EIF4G1Q04637 1599 aaKnown RBP43.33■■■■■ 4.53
APC-209ENST00000509732 CECR2Q9BXF3 1484 aa43.29■■■■■ 4.52
APC-209ENST00000509732 NCAPD3P42695 1498 aa41.99■■■■■ 4.31
APC-209ENST00000509732 ATAD2BQ9ULI0 1458 aa41.86■■■■■ 4.29
APC-209ENST00000509732 SMARCA4P51532 1647 aa41.78■■■■■ 4.28
APC-209ENST00000509732 SMARCA2P51531 1590 aa41.67■■■■■ 4.26
APC-209ENST00000509732 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
APC-209ENST00000509732 BAZ1AQ9NRL2 1556 aaPredicted RBP41.56■■■■■ 4.24
APC-209ENST00000509732 ERCC6Q03468 1493 aa41.42■■■■■ 4.22
APC-209ENST00000509732 PEG3Q9GZU2 1588 aa41.42■■■■■ 4.22
APC-209ENST00000509732 DNAJC5Q9H3Z4 198 aa41.4■■■■■ 4.22
APC-209ENST00000509732 BAZ1BQ9UIG0 1483 aaKnown RBP41.4■■■■■ 4.22
APC-209ENST00000509732 CUX2O14529 1486 aa41.39■■■■■ 4.22
APC-209ENST00000509732 NESP48681 1621 aa41.34■■■■■ 4.21
APC-209ENST00000509732 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
APC-209ENST00000509732 LAMC3Q9Y6N6 1575 aa40.97■■■■■ 4.15
APC-209ENST00000509732 THOC2Q8NI27 1593 aaKnown RBP40.88■■■■■ 4.13
APC-209ENST00000509732 WIZO95785 1651 aa40.78■■■■■ 4.12
APC-209ENST00000509732 PDS5BQ9NTI5 1447 aa40.73■■■■■ 4.11
APC-209ENST00000509732 KIF21AQ7Z4S6 1674 aa40.71■■■■■ 4.11
APC-209ENST00000509732 CADPSQ9ULU8 1353 aa40.7■■■■■ 4.11
APC-209ENST00000509732 RSF1Q96T23 1441 aaPredicted RBP40.5■■■■■ 4.07
APC-209ENST00000509732 MRC2Q9UBG0 1479 aa40.4■■■■■ 4.06
APC-209ENST00000509732 WDR62O43379 1518 aa40.33■■■■■ 4.05
APC-209ENST00000509732 TOP2AP11388 1531 aaKnown RBP40.27■■■■■ 4.04
APC-209ENST00000509732 CFTRP13569 1480 aa40.26■■■■■ 4.03
APC-209ENST00000509732 CEP164Q9UPV0 1460 aa40.23■■■■■ 4.03
APC-209ENST00000509732 FANCD2Q9BXW9 1451 aa40.22■■■■■ 4.03
APC-209ENST00000509732 URB2Q14146 1524 aaKnown RBP39.94■■■■□ 3.98
APC-209ENST00000509732 CCDC88BA6NC98 1476 aa39.86■■■■□ 3.97
APC-209ENST00000509732 PRDM2Q13029 1718 aa39.69■■■■□ 3.94
APC-209ENST00000509732 TRIM41Q8WV44 630 aa39.52■■■■□ 3.92
APC-209ENST00000509732 OSCARQ8IYS5 282 aa39.49■■■■□ 3.91
APC-209ENST00000509732 TOPBP1Q92547 1522 aa39.47■■■■□ 3.91
APC-209ENST00000509732 ZNF608Q9ULD9 1512 aaPredicted RBP39.45■■■■□ 3.91
APC-209ENST00000509732 IFT140Q96RY7 1462 aa39.44■■■■□ 3.9
APC-209ENST00000509732 ABCC8Q09428 1581 aa39.31■■■■□ 3.88
APC-209ENST00000509732 DNMBPQ6XZF7 1577 aa39.29■■■■□ 3.88
APC-209ENST00000509732 EIF4G3O43432 1585 aaKnown RBP39.16■■■■□ 3.86
APC-209ENST00000509732 TARBP1Q13395 1621 aaKnown RBP39.14■■■■□ 3.86
APC-209ENST00000509732 POLA1P09884 1462 aaPredicted RBP39.09■■■■□ 3.85
APC-209ENST00000509732 AQRO60306 1485 aaKnown RBP eCLIP39.07■■■■□ 3.85
APC-209ENST00000509732 RIMBP3CA6NJZ7 1639 aa39■■■■□ 3.83
APC-209ENST00000509732 RIMBP3BA6NNM3 1639 aa39■■■■□ 3.83
APC-209ENST00000509732 RIMBP3Q9UFD9 1639 aa39■■■■□ 3.83
APC-209ENST00000509732 RAD54L2Q9Y4B4 1467 aa38.95■■■■□ 3.83
APC-209ENST00000509732 ARHGEF11O15085 1522 aa38.89■■■■□ 3.82
APC-209ENST00000509732 SOGA1O94964 1423 aa38.88■■■■□ 3.81
APC-209ENST00000509732 CUX1P39880 1505 aa38.83■■■■□ 3.81
APC-209ENST00000509732 TDRD9Q8NDG6 1382 aaKnown RBP38.82■■■■□ 3.81
APC-209ENST00000509732 FGD5Q6ZNL6 1462 aa38.82■■■■□ 3.81
APC-209ENST00000509732 CHD1O14646 1710 aa38.81■■■■□ 3.8
APC-209ENST00000509732 FBLN2P98095 1184 aa38.71■■■■□ 3.79
APC-209ENST00000509732 WDR97A6NE52 1622 aa38.66■■■■□ 3.78
APC-209ENST00000509732 SNAPC4Q5SXM2 1469 aa38.65■■■■□ 3.78
APC-209ENST00000509732 SUPT5HO00267 1087 aaKnown RBP38.63■■■■□ 3.77
APC-209ENST00000509732 CYB5RLQ6IPT4 315 aa38.58■■■■□ 3.77
APC-209ENST00000509732 ARAP1Q96P48 1450 aa38.54■■■■□ 3.76
APC-209ENST00000509732 GRIN2BQ13224 1484 aa38.53■■■■□ 3.76
APC-209ENST00000509732 MAGI1Q96QZ7 1491 aaPredicted RBP38.52■■■■□ 3.76
APC-209ENST00000509732 CLASP1Q7Z460 1538 aa38.47■■■■□ 3.75
APC-209ENST00000509732 CHMP7Q8WUX9 453 aaPredicted RBP38.44■■■■□ 3.74
APC-209ENST00000509732 SYNJ2O15056 1496 aa38.41■■■■□ 3.74
APC-209ENST00000509732 GAPVD1Q14C86 1478 aa38.4■■■■□ 3.74
APC-209ENST00000509732 ABCA10Q8WWZ4 1543 aa38.39■■■■□ 3.74
APC-209ENST00000509732 SYNJ1O43426 1573 aa38.35■■■■□ 3.73
APC-209ENST00000509732 ABCA5Q8WWZ7 1642 aa38.33■■■■□ 3.73
APC-209ENST00000509732 PBRM1Q86U86 1689 aa38.31■■■■□ 3.72
APC-209ENST00000509732 WRNQ14191 1432 aaPredicted RBP eCLIP38.21■■■■□ 3.71
APC-209ENST00000509732 TOP2BQ02880 1626 aa38.16■■■■□ 3.7
APC-209ENST00000509732 BIVM-ERCC5R4GMW8 1640 aa38.15■■■■□ 3.7
APC-209ENST00000509732 TRHP20396 242 aaPredicted RBP38.07■■■■□ 3.68
APC-209ENST00000509732 GRIN2AQ12879 1464 aa38.05■■■■□ 3.68
APC-209ENST00000509732 ADAMTS12P58397 1594 aa38.02■■■■□ 3.68
APC-209ENST00000509732 NUP160Q12769 1436 aa37.95■■■■□ 3.67
APC-209ENST00000509732 CEP170Q5SW79 1584 aa37.93■■■■□ 3.66
APC-209ENST00000509732 FHAD1B1AJZ9 1412 aa37.92■■■■□ 3.66
APC-209ENST00000509732 ERCC6L2Q5T890 1561 aa37.91■■■■□ 3.66
APC-209ENST00000509732 ERICH3Q5RHP9 1530 aa37.88■■■■□ 3.65
APC-209ENST00000509732 SHROOM2Q13796 1616 aa37.76■■■■□ 3.63
APC-209ENST00000509732 PRG4Q92954 1404 aaPredicted RBP37.55■■■■□ 3.6
APC-209ENST00000509732 JPH4Q96JJ6 628 aa37.52■■■■□ 3.6
APC-209ENST00000509732 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.59
APC-209ENST00000509732 IGF1RP08069 1367 aa37.47■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms