RNA–Protein interactions for RNA: ENST00000509573.5

TMEM173-207, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-207ENST00000509573 NISCHQ9Y2I1 1504 aa23.37■■□□□ 1.33
TMEM173-207ENST00000509573 ABCC9O60706 1549 aa21.19■□□□□ 0.98
TMEM173-207ENST00000509573 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
TMEM173-207ENST00000509573 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
TMEM173-207ENST00000509573 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
TMEM173-207ENST00000509573 NACADO15069 1562 aa19.94■□□□□ 0.78
TMEM173-207ENST00000509573 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
TMEM173-207ENST00000509573 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
TMEM173-207ENST00000509573 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
TMEM173-207ENST00000509573 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
TMEM173-207ENST00000509573 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
TMEM173-207ENST00000509573 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
TMEM173-207ENST00000509573 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
TMEM173-207ENST00000509573 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
TMEM173-207ENST00000509573 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
TMEM173-207ENST00000509573 CC2D2AQ9P2K1 1620 aa19.13■□□□□ 0.65
TMEM173-207ENST00000509573 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
TMEM173-207ENST00000509573 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
TMEM173-207ENST00000509573 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
TMEM173-207ENST00000509573 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
TMEM173-207ENST00000509573 CUX2O14529 1486 aa18.34■□□□□ 0.53
TMEM173-207ENST00000509573 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
TMEM173-207ENST00000509573 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.52
TMEM173-207ENST00000509573 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
TMEM173-207ENST00000509573 SMARCA4P51532 1647 aa18.27■□□□□ 0.51
TMEM173-207ENST00000509573 HMGXB3Q12766 1538 aa18.26■□□□□ 0.51
TMEM173-207ENST00000509573 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
TMEM173-207ENST00000509573 BAZ1BQ9UIG0 1483 aaKnown RBP18.15■□□□□ 0.5
TMEM173-207ENST00000509573 NESP48681 1621 aa18.15■□□□□ 0.5
TMEM173-207ENST00000509573 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
TMEM173-207ENST00000509573 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
TMEM173-207ENST00000509573 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
TMEM173-207ENST00000509573 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
TMEM173-207ENST00000509573 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
TMEM173-207ENST00000509573 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
TMEM173-207ENST00000509573 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
TMEM173-207ENST00000509573 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
TMEM173-207ENST00000509573 WIZO95785 1651 aa17.76■□□□□ 0.43
TMEM173-207ENST00000509573 WDR62O43379 1518 aa17.74■□□□□ 0.43
TMEM173-207ENST00000509573 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
TMEM173-207ENST00000509573 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
TMEM173-207ENST00000509573 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
TMEM173-207ENST00000509573 CFTRP13569 1480 aa17.6■□□□□ 0.41
TMEM173-207ENST00000509573 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
TMEM173-207ENST00000509573 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
TMEM173-207ENST00000509573 URB2Q14146 1524 aaKnown RBP17.49■□□□□ 0.39
TMEM173-207ENST00000509573 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
TMEM173-207ENST00000509573 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
TMEM173-207ENST00000509573 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
TMEM173-207ENST00000509573 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
TMEM173-207ENST00000509573 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
TMEM173-207ENST00000509573 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
TMEM173-207ENST00000509573 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
TMEM173-207ENST00000509573 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
TMEM173-207ENST00000509573 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
TMEM173-207ENST00000509573 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
TMEM173-207ENST00000509573 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
TMEM173-207ENST00000509573 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
TMEM173-207ENST00000509573 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
TMEM173-207ENST00000509573 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
TMEM173-207ENST00000509573 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.331e-6■■■■■ 32.6
TMEM173-207ENST00000509573 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
TMEM173-207ENST00000509573 CHD1O14646 1710 aa17.09■□□□□ 0.33
TMEM173-207ENST00000509573 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
TMEM173-207ENST00000509573 FBLN2P98095 1184 aa17.06■□□□□ 0.32
TMEM173-207ENST00000509573 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
TMEM173-207ENST00000509573 SOGA1O94964 1423 aa17.02■□□□□ 0.31
TMEM173-207ENST00000509573 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
TMEM173-207ENST00000509573 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
TMEM173-207ENST00000509573 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
TMEM173-207ENST00000509573 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
TMEM173-207ENST00000509573 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
TMEM173-207ENST00000509573 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
TMEM173-207ENST00000509573 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
TMEM173-207ENST00000509573 CUX1P39880 1505 aa16.92■□□□□ 0.3
TMEM173-207ENST00000509573 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
TMEM173-207ENST00000509573 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
TMEM173-207ENST00000509573 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
TMEM173-207ENST00000509573 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
TMEM173-207ENST00000509573 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
TMEM173-207ENST00000509573 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
TMEM173-207ENST00000509573 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
TMEM173-207ENST00000509573 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
TMEM173-207ENST00000509573 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
TMEM173-207ENST00000509573 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
TMEM173-207ENST00000509573 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
TMEM173-207ENST00000509573 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
TMEM173-207ENST00000509573 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
TMEM173-207ENST00000509573 NUP160Q12769 1436 aa16.62■□□□□ 0.25
TMEM173-207ENST00000509573 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
TMEM173-207ENST00000509573 ERCC6L2Q5T890 1561 aa16.62■□□□□ 0.25
TMEM173-207ENST00000509573 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
TMEM173-207ENST00000509573 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
TMEM173-207ENST00000509573 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
TMEM173-207ENST00000509573 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
TMEM173-207ENST00000509573 ERICH3Q5RHP9 1530 aa16.56■□□□□ 0.24
TMEM173-207ENST00000509573 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
TMEM173-207ENST00000509573 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
TMEM173-207ENST00000509573 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
TMEM173-207ENST00000509573 RUSC2Q8N2Y8 1516 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms