RNA–Protein interactions for RNA: ENST00000509543.1

PTGER4-202, Transcript of prostaglandin E receptor 4, humanhuman

TSL 3

Gene PTGER4, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER4-202ENST00000509543 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
PTGER4-202ENST00000509543 ABCC9O60706 1549 aa26.83■■□□□ 1.89
PTGER4-202ENST00000509543 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
PTGER4-202ENST00000509543 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
PTGER4-202ENST00000509543 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
PTGER4-202ENST00000509543 NACADO15069 1562 aa25.05■■□□□ 1.6
PTGER4-202ENST00000509543 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
PTGER4-202ENST00000509543 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
PTGER4-202ENST00000509543 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
PTGER4-202ENST00000509543 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
PTGER4-202ENST00000509543 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
PTGER4-202ENST00000509543 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
PTGER4-202ENST00000509543 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
PTGER4-202ENST00000509543 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
PTGER4-202ENST00000509543 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
PTGER4-202ENST00000509543 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
PTGER4-202ENST00000509543 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
PTGER4-202ENST00000509543 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
PTGER4-202ENST00000509543 DNAJC5Q9H3Z4 198 aa23.76■■□□□ 1.39
PTGER4-202ENST00000509543 CUX2O14529 1486 aa23.26■■□□□ 1.31
PTGER4-202ENST00000509543 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
PTGER4-202ENST00000509543 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
PTGER4-202ENST00000509543 ATAD2BQ9ULI0 1458 aa23.02■■□□□ 1.28
PTGER4-202ENST00000509543 NESP48681 1621 aa22.95■■□□□ 1.26
PTGER4-202ENST00000509543 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
PTGER4-202ENST00000509543 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
PTGER4-202ENST00000509543 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
PTGER4-202ENST00000509543 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
PTGER4-202ENST00000509543 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
PTGER4-202ENST00000509543 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
PTGER4-202ENST00000509543 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
PTGER4-202ENST00000509543 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
PTGER4-202ENST00000509543 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
PTGER4-202ENST00000509543 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
PTGER4-202ENST00000509543 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
PTGER4-202ENST00000509543 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
PTGER4-202ENST00000509543 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
PTGER4-202ENST00000509543 MRC2Q9UBG0 1479 aa22.39■■□□□ 1.17
PTGER4-202ENST00000509543 WDR62O43379 1518 aa22.37■■□□□ 1.17
PTGER4-202ENST00000509543 WIZO95785 1651 aa22.27■■□□□ 1.16
PTGER4-202ENST00000509543 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
PTGER4-202ENST00000509543 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
PTGER4-202ENST00000509543 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
PTGER4-202ENST00000509543 CFTRP13569 1480 aa22.07■■□□□ 1.12
PTGER4-202ENST00000509543 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
PTGER4-202ENST00000509543 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
PTGER4-202ENST00000509543 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
PTGER4-202ENST00000509543 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
PTGER4-202ENST00000509543 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
PTGER4-202ENST00000509543 PRDM2Q13029 1718 aa21.89■■□□□ 1.1
PTGER4-202ENST00000509543 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
PTGER4-202ENST00000509543 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
PTGER4-202ENST00000509543 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
PTGER4-202ENST00000509543 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
PTGER4-202ENST00000509543 TOPBP1Q92547 1522 aa21.7■■□□□ 1.07
PTGER4-202ENST00000509543 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
PTGER4-202ENST00000509543 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
PTGER4-202ENST00000509543 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
PTGER4-202ENST00000509543 CHD1O14646 1710 aa21.65■■□□□ 1.06
PTGER4-202ENST00000509543 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
PTGER4-202ENST00000509543 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
PTGER4-202ENST00000509543 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.04
PTGER4-202ENST00000509543 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.04
PTGER4-202ENST00000509543 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
PTGER4-202ENST00000509543 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
PTGER4-202ENST00000509543 FBLN2P98095 1184 aa21.48■■□□□ 1.03
PTGER4-202ENST00000509543 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
PTGER4-202ENST00000509543 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
PTGER4-202ENST00000509543 TDRD9Q8NDG6 1382 aaKnown RBP21.36■■□□□ 1.01
PTGER4-202ENST00000509543 CLASP1Q7Z460 1538 aa21.35■■□□□ 1.01
PTGER4-202ENST00000509543 SOGA1O94964 1423 aa21.33■■□□□ 1.01
PTGER4-202ENST00000509543 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
PTGER4-202ENST00000509543 WDR97A6NE52 1622 aa21.27■■□□□ 1
PTGER4-202ENST00000509543 SYNJ1O43426 1573 aa21.27■□□□□ 0.99
PTGER4-202ENST00000509543 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
PTGER4-202ENST00000509543 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
PTGER4-202ENST00000509543 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
PTGER4-202ENST00000509543 CUX1P39880 1505 aa21.19■□□□□ 0.98
PTGER4-202ENST00000509543 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
PTGER4-202ENST00000509543 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
PTGER4-202ENST00000509543 SYNJ2O15056 1496 aa21.18■□□□□ 0.98
PTGER4-202ENST00000509543 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
PTGER4-202ENST00000509543 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
PTGER4-202ENST00000509543 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
PTGER4-202ENST00000509543 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.96
PTGER4-202ENST00000509543 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
PTGER4-202ENST00000509543 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
PTGER4-202ENST00000509543 CEP170Q5SW79 1584 aa20.92■□□□□ 0.94
PTGER4-202ENST00000509543 ADAMTS12P58397 1594 aa20.89■□□□□ 0.93
PTGER4-202ENST00000509543 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
PTGER4-202ENST00000509543 NUP160Q12769 1436 aa20.87■□□□□ 0.93
PTGER4-202ENST00000509543 SHROOM2Q13796 1616 aa20.87■□□□□ 0.93
PTGER4-202ENST00000509543 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
PTGER4-202ENST00000509543 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
PTGER4-202ENST00000509543 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
PTGER4-202ENST00000509543 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
PTGER4-202ENST00000509543 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
PTGER4-202ENST00000509543 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
PTGER4-202ENST00000509543 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
PTGER4-202ENST00000509543 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms