RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 NISCHQ9Y2I1 1504 aa39.06■■■■□ 3.84
NDFIP1-204ENST00000509436 ABCC9O60706 1549 aa36.53■■■■□ 3.44
NDFIP1-204ENST00000509436 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
NDFIP1-204ENST00000509436 DNAJC5BQ9UF47 199 aa35.27■■■■□ 3.24
NDFIP1-204ENST00000509436 RB1CC1Q8TDY2 1594 aa34.36■■■■□ 3.09
NDFIP1-204ENST00000509436 NACADO15069 1562 aa33.87■■■■□ 3.01
NDFIP1-204ENST00000509436 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■□□ 2.99
NDFIP1-204ENST00000509436 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
NDFIP1-204ENST00000509436 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
NDFIP1-204ENST00000509436 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
NDFIP1-204ENST00000509436 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
NDFIP1-204ENST00000509436 MYO15BQ96JP2 1530 aa33.1■■■□□ 2.89
NDFIP1-204ENST00000509436 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
NDFIP1-204ENST00000509436 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
NDFIP1-204ENST00000509436 SHROOM4Q9ULL8 1493 aa32.9■■■□□ 2.86
NDFIP1-204ENST00000509436 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
NDFIP1-204ENST00000509436 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
NDFIP1-204ENST00000509436 SCRIBQ14160 1630 aa32.26■■■□□ 2.75
NDFIP1-204ENST00000509436 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
NDFIP1-204ENST00000509436 CUX2O14529 1486 aa32.01■■■□□ 2.71
NDFIP1-204ENST00000509436 ERCC6Q03468 1493 aa31.58■■■□□ 2.65
NDFIP1-204ENST00000509436 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
NDFIP1-204ENST00000509436 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
NDFIP1-204ENST00000509436 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
NDFIP1-204ENST00000509436 NESP48681 1621 aa31.09■■■□□ 2.57
NDFIP1-204ENST00000509436 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.55
NDFIP1-204ENST00000509436 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
NDFIP1-204ENST00000509436 SMARCA2P51531 1590 aa30.85■■■□□ 2.53
NDFIP1-204ENST00000509436 LAMC3Q9Y6N6 1575 aa30.75■■■□□ 2.51
NDFIP1-204ENST00000509436 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
NDFIP1-204ENST00000509436 KIF21AQ7Z4S6 1674 aa30.72■■■□□ 2.51
NDFIP1-204ENST00000509436 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
NDFIP1-204ENST00000509436 PDS5BQ9NTI5 1447 aa30.54■■■□□ 2.48
NDFIP1-204ENST00000509436 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
NDFIP1-204ENST00000509436 BAZ1AQ9NRL2 1556 aaPredicted RBP30.46■■■□□ 2.47
NDFIP1-204ENST00000509436 WDR62O43379 1518 aa30.4■■■□□ 2.46
NDFIP1-204ENST00000509436 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
NDFIP1-204ENST00000509436 OSCARQ8IYS5 282 aa30.23■■■□□ 2.43
NDFIP1-204ENST00000509436 CADPSQ9ULU8 1353 aa30.21■■■□□ 2.43
NDFIP1-204ENST00000509436 RIMBP3CA6NJZ7 1639 aa30.1■■■□□ 2.41
NDFIP1-204ENST00000509436 RIMBP3BA6NNM3 1639 aa30.1■■■□□ 2.41
NDFIP1-204ENST00000509436 RIMBP3Q9UFD9 1639 aa30.1■■■□□ 2.41
NDFIP1-204ENST00000509436 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
NDFIP1-204ENST00000509436 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.4
NDFIP1-204ENST00000509436 FANCD2Q9BXW9 1451 aa29.88■■■□□ 2.37
NDFIP1-204ENST00000509436 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
NDFIP1-204ENST00000509436 URB2Q14146 1524 aaKnown RBP29.75■■■□□ 2.35
NDFIP1-204ENST00000509436 CFTRP13569 1480 aa29.68■■■□□ 2.34
NDFIP1-204ENST00000509436 WIZO95785 1651 aa29.66■■■□□ 2.34
NDFIP1-204ENST00000509436 CYB5RLQ6IPT4 315 aa29.57■■■□□ 2.32
NDFIP1-204ENST00000509436 TRHP20396 242 aaPredicted RBP29.55■■■□□ 2.32
NDFIP1-204ENST00000509436 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
NDFIP1-204ENST00000509436 ARAP1Q96P48 1450 aa29.5■■■□□ 2.31
NDFIP1-204ENST00000509436 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
NDFIP1-204ENST00000509436 IFT140Q96RY7 1462 aa29.47■■■□□ 2.31
NDFIP1-204ENST00000509436 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
NDFIP1-204ENST00000509436 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
NDFIP1-204ENST00000509436 CHD1O14646 1710 aa29.35■■■□□ 2.29
NDFIP1-204ENST00000509436 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
NDFIP1-204ENST00000509436 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
NDFIP1-204ENST00000509436 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
NDFIP1-204ENST00000509436 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
NDFIP1-204ENST00000509436 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.252e-9■■■■■ 39.4
NDFIP1-204ENST00000509436 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
NDFIP1-204ENST00000509436 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
NDFIP1-204ENST00000509436 CLASP1Q7Z460 1538 aa29.02■■■□□ 2.24
NDFIP1-204ENST00000509436 FBLN2P98095 1184 aa28.97■■■□□ 2.23
NDFIP1-204ENST00000509436 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
NDFIP1-204ENST00000509436 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
NDFIP1-204ENST00000509436 SYNJ1O43426 1573 aa28.83■■■□□ 2.21
NDFIP1-204ENST00000509436 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
NDFIP1-204ENST00000509436 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
NDFIP1-204ENST00000509436 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
NDFIP1-204ENST00000509436 GAPVD1Q14C86 1478 aa28.71■■■□□ 2.19
NDFIP1-204ENST00000509436 SUPT5HO00267 1087 aaKnown RBP28.7■■■□□ 2.18
NDFIP1-204ENST00000509436 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
NDFIP1-204ENST00000509436 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
NDFIP1-204ENST00000509436 SOGA1O94964 1423 aa28.63■■■□□ 2.17
NDFIP1-204ENST00000509436 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
NDFIP1-204ENST00000509436 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
NDFIP1-204ENST00000509436 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
NDFIP1-204ENST00000509436 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
NDFIP1-204ENST00000509436 KIF13AQ9H1H9 1805 aa28.48■■■□□ 2.15
NDFIP1-204ENST00000509436 ILDR1Q86SU0 546 aaPredicted RBP28.47■■■□□ 2.15
NDFIP1-204ENST00000509436 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.14
NDFIP1-204ENST00000509436 PBRM1Q86U86 1689 aa28.43■■■□□ 2.14
NDFIP1-204ENST00000509436 CUX1P39880 1505 aa28.32■■■□□ 2.12
NDFIP1-204ENST00000509436 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
NDFIP1-204ENST00000509436 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
NDFIP1-204ENST00000509436 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
NDFIP1-204ENST00000509436 KDM4FA0A1W2PPD8 638 aa28.23■■■□□ 2.11
NDFIP1-204ENST00000509436 GRIN2AQ12879 1464 aa28.21■■■□□ 2.11
NDFIP1-204ENST00000509436 NUP160Q12769 1436 aa28.18■■■□□ 2.1
NDFIP1-204ENST00000509436 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
NDFIP1-204ENST00000509436 ABCC10Q5T3U5 1492 aa28.11■■■□□ 2.09
NDFIP1-204ENST00000509436 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
NDFIP1-204ENST00000509436 KDM6BO15054 1643 aa28.05■■■□□ 2.08
NDFIP1-204ENST00000509436 DIP2BQ9P265 1576 aa28.04■■■□□ 2.08
NDFIP1-204ENST00000509436 MAPKBP1O60336 1514 aa28.02■■■□□ 2.08
NDFIP1-204ENST00000509436 FAM69CQ0P6D2 419 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms