RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 NISCHQ9Y2I1 1504 aa33.64■■■□□ 2.98
SDHA-210ENST00000509420 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
SDHA-210ENST00000509420 ABCC9O60706 1549 aa29.84■■■□□ 2.37
SDHA-210ENST00000509420 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
SDHA-210ENST00000509420 NACADO15069 1562 aa28.36■■■□□ 2.13
SDHA-210ENST00000509420 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
SDHA-210ENST00000509420 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
SDHA-210ENST00000509420 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
SDHA-210ENST00000509420 ZCCHC6Q5VYS8 1495 aaKnown RBP27.96■■■□□ 2.07
SDHA-210ENST00000509420 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
SDHA-210ENST00000509420 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
SDHA-210ENST00000509420 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
SDHA-210ENST00000509420 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
SDHA-210ENST00000509420 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
SDHA-210ENST00000509420 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
SDHA-210ENST00000509420 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.92
SDHA-210ENST00000509420 EIF4G1Q04637 1599 aaKnown RBP27.01■■□□□ 1.92
SDHA-210ENST00000509420 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
SDHA-210ENST00000509420 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
SDHA-210ENST00000509420 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
SDHA-210ENST00000509420 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
SDHA-210ENST00000509420 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
SDHA-210ENST00000509420 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
SDHA-210ENST00000509420 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
SDHA-210ENST00000509420 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
SDHA-210ENST00000509420 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
SDHA-210ENST00000509420 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
SDHA-210ENST00000509420 NESP48681 1621 aa25.77■■□□□ 1.72
SDHA-210ENST00000509420 WIZO95785 1651 aa25.64■■□□□ 1.7
SDHA-210ENST00000509420 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
SDHA-210ENST00000509420 CUX2O14529 1486 aa25.61■■□□□ 1.69
SDHA-210ENST00000509420 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
SDHA-210ENST00000509420 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
SDHA-210ENST00000509420 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
SDHA-210ENST00000509420 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.66
SDHA-210ENST00000509420 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
SDHA-210ENST00000509420 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
SDHA-210ENST00000509420 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
SDHA-210ENST00000509420 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
SDHA-210ENST00000509420 CFTRP13569 1480 aa25.18■■□□□ 1.62
SDHA-210ENST00000509420 WDR62O43379 1518 aa25.16■■□□□ 1.62
SDHA-210ENST00000509420 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
SDHA-210ENST00000509420 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
SDHA-210ENST00000509420 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
SDHA-210ENST00000509420 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
SDHA-210ENST00000509420 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
SDHA-210ENST00000509420 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
SDHA-210ENST00000509420 TOPBP1Q92547 1522 aa24.67■■□□□ 1.54
SDHA-210ENST00000509420 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
SDHA-210ENST00000509420 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
SDHA-210ENST00000509420 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
SDHA-210ENST00000509420 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
SDHA-210ENST00000509420 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
SDHA-210ENST00000509420 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
SDHA-210ENST00000509420 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
SDHA-210ENST00000509420 CUX1P39880 1505 aa24.37■■□□□ 1.49
SDHA-210ENST00000509420 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
SDHA-210ENST00000509420 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.493e-7■■■■□ 20.6
SDHA-210ENST00000509420 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
SDHA-210ENST00000509420 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
SDHA-210ENST00000509420 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
SDHA-210ENST00000509420 SOGA1O94964 1423 aa24.25■■□□□ 1.47
SDHA-210ENST00000509420 CHD1O14646 1710 aa24.24■■□□□ 1.47
SDHA-210ENST00000509420 WDR97A6NE52 1622 aa24.23■■□□□ 1.47
SDHA-210ENST00000509420 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
SDHA-210ENST00000509420 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
SDHA-210ENST00000509420 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
SDHA-210ENST00000509420 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
SDHA-210ENST00000509420 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
SDHA-210ENST00000509420 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
SDHA-210ENST00000509420 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
SDHA-210ENST00000509420 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
SDHA-210ENST00000509420 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
SDHA-210ENST00000509420 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
SDHA-210ENST00000509420 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
SDHA-210ENST00000509420 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
SDHA-210ENST00000509420 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
SDHA-210ENST00000509420 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
SDHA-210ENST00000509420 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
SDHA-210ENST00000509420 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
SDHA-210ENST00000509420 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
SDHA-210ENST00000509420 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
SDHA-210ENST00000509420 FBLN2P98095 1184 aa23.95■■□□□ 1.42
SDHA-210ENST00000509420 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
SDHA-210ENST00000509420 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
SDHA-210ENST00000509420 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
SDHA-210ENST00000509420 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
SDHA-210ENST00000509420 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
SDHA-210ENST00000509420 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
SDHA-210ENST00000509420 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
SDHA-210ENST00000509420 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
SDHA-210ENST00000509420 NUP160Q12769 1436 aa23.72■■□□□ 1.39
SDHA-210ENST00000509420 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
SDHA-210ENST00000509420 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
SDHA-210ENST00000509420 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
SDHA-210ENST00000509420 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
SDHA-210ENST00000509420 IGF1RP08069 1367 aa23.48■■□□□ 1.35
SDHA-210ENST00000509420 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
SDHA-210ENST00000509420 CUL7Q14999 1698 aa23.41■■□□□ 1.34
SDHA-210ENST00000509420 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms