RNA–Protein interactions for RNA: ENST00000509362.5

NIM1K-203, Transcript of NIM1 serine/threonine protein kinase, humanhuman

TSL 2

Gene NIM1K, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIM1K-203ENST00000509362 NISCHQ9Y2I1 1504 aa26.36■■□□□ 1.81
NIM1K-203ENST00000509362 ABCC9O60706 1549 aa24.55■■□□□ 1.52
NIM1K-203ENST00000509362 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
NIM1K-203ENST00000509362 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.38
NIM1K-203ENST00000509362 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
NIM1K-203ENST00000509362 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
NIM1K-203ENST00000509362 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
NIM1K-203ENST00000509362 NACADO15069 1562 aa22.34■■□□□ 1.17
NIM1K-203ENST00000509362 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
NIM1K-203ENST00000509362 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
NIM1K-203ENST00000509362 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
NIM1K-203ENST00000509362 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
NIM1K-203ENST00000509362 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
NIM1K-203ENST00000509362 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
NIM1K-203ENST00000509362 ZCCHC6Q5VYS8 1495 aaKnown RBP21.85■■□□□ 1.09
NIM1K-203ENST00000509362 DCAF1Q9Y4B6 1507 aa21.73■■□□□ 1.07
NIM1K-203ENST00000509362 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
NIM1K-203ENST00000509362 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
NIM1K-203ENST00000509362 CUX2O14529 1486 aa21.64■■□□□ 1.05
NIM1K-203ENST00000509362 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
NIM1K-203ENST00000509362 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
NIM1K-203ENST00000509362 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
NIM1K-203ENST00000509362 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
NIM1K-203ENST00000509362 NESP48681 1621 aa20.72■□□□□ 0.91
NIM1K-203ENST00000509362 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
NIM1K-203ENST00000509362 NCAPD3P42695 1498 aa20.62■□□□□ 0.89
NIM1K-203ENST00000509362 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
NIM1K-203ENST00000509362 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
NIM1K-203ENST00000509362 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
NIM1K-203ENST00000509362 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
NIM1K-203ENST00000509362 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
NIM1K-203ENST00000509362 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
NIM1K-203ENST00000509362 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
NIM1K-203ENST00000509362 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
NIM1K-203ENST00000509362 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
NIM1K-203ENST00000509362 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
NIM1K-203ENST00000509362 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
NIM1K-203ENST00000509362 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
NIM1K-203ENST00000509362 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
NIM1K-203ENST00000509362 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
NIM1K-203ENST00000509362 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
NIM1K-203ENST00000509362 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
NIM1K-203ENST00000509362 ILDR1Q86SU0 546 aaPredicted RBP20.15■□□□□ 0.82
NIM1K-203ENST00000509362 WDR62O43379 1518 aa20.12■□□□□ 0.81
NIM1K-203ENST00000509362 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
NIM1K-203ENST00000509362 WIZO95785 1651 aa20.1■□□□□ 0.81
NIM1K-203ENST00000509362 MRC2Q9UBG0 1479 aa20.1■□□□□ 0.81
NIM1K-203ENST00000509362 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
NIM1K-203ENST00000509362 CADPSQ9ULU8 1353 aa20.01■□□□□ 0.79
NIM1K-203ENST00000509362 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
NIM1K-203ENST00000509362 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
NIM1K-203ENST00000509362 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
NIM1K-203ENST00000509362 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
NIM1K-203ENST00000509362 FANCD2Q9BXW9 1451 aa19.81■□□□□ 0.76
NIM1K-203ENST00000509362 CFTRP13569 1480 aa19.78■□□□□ 0.76
NIM1K-203ENST00000509362 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
NIM1K-203ENST00000509362 CCDC88BA6NC98 1476 aa19.61■□□□□ 0.73
NIM1K-203ENST00000509362 CHD1O14646 1710 aa19.58■□□□□ 0.72
NIM1K-203ENST00000509362 PRDM2Q13029 1718 aa19.58■□□□□ 0.72
NIM1K-203ENST00000509362 ZNF608Q9ULD9 1512 aaPredicted RBP19.57■□□□□ 0.72
NIM1K-203ENST00000509362 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
NIM1K-203ENST00000509362 EIF4G3O43432 1585 aaKnown RBP19.42■□□□□ 0.7
NIM1K-203ENST00000509362 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
NIM1K-203ENST00000509362 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
NIM1K-203ENST00000509362 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
NIM1K-203ENST00000509362 KDM4FA0A1W2PPD8 638 aa19.3■□□□□ 0.68
NIM1K-203ENST00000509362 FBLN2P98095 1184 aa19.28■□□□□ 0.68
NIM1K-203ENST00000509362 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
NIM1K-203ENST00000509362 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
NIM1K-203ENST00000509362 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
NIM1K-203ENST00000509362 POLA1P09884 1462 aaPredicted RBP19.23■□□□□ 0.67
NIM1K-203ENST00000509362 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
NIM1K-203ENST00000509362 KIF13AQ9H1H9 1805 aa19.17■□□□□ 0.66
NIM1K-203ENST00000509362 SOGA1O94964 1423 aa19.15■□□□□ 0.66
NIM1K-203ENST00000509362 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
NIM1K-203ENST00000509362 TDRD9Q8NDG6 1382 aaKnown RBP19.13■□□□□ 0.65
NIM1K-203ENST00000509362 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
NIM1K-203ENST00000509362 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
NIM1K-203ENST00000509362 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
NIM1K-203ENST00000509362 CUX1P39880 1505 aa19.1■□□□□ 0.65
NIM1K-203ENST00000509362 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
NIM1K-203ENST00000509362 LMTK3Q96Q04 1460 aa19.06■□□□□ 0.64
NIM1K-203ENST00000509362 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
NIM1K-203ENST00000509362 SNAPC4Q5SXM2 1469 aa19.04■□□□□ 0.64
NIM1K-203ENST00000509362 FBXO41Q8TF61 875 aa19.04■□□□□ 0.64
NIM1K-203ENST00000509362 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
NIM1K-203ENST00000509362 GRIN2BQ13224 1484 aa18.97■□□□□ 0.63
NIM1K-203ENST00000509362 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
NIM1K-203ENST00000509362 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
NIM1K-203ENST00000509362 KDM6BO15054 1643 aa18.92■□□□□ 0.62
NIM1K-203ENST00000509362 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
NIM1K-203ENST00000509362 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
NIM1K-203ENST00000509362 SOCS7O14512 581 aa18.89■□□□□ 0.61
NIM1K-203ENST00000509362 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
NIM1K-203ENST00000509362 ILDR2Q71H61 639 aa18.87■□□□□ 0.61
NIM1K-203ENST00000509362 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
NIM1K-203ENST00000509362 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
NIM1K-203ENST00000509362 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
NIM1K-203ENST00000509362 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
NIM1K-203ENST00000509362 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms