RNA–Protein interactions for RNA: ENST00000509323.1

ESRRB-205, Transcript of estrogen related receptor beta, humanhuman

TSL 3

Gene ESRRB, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-205ENST00000509323 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
ESRRB-205ENST00000509323 CCDC180Q9P1Z9 1646 aa15.05■□□□□ -0
ESRRB-205ENST00000509323 ABCC9O60706 1549 aa14.84□□□□□ -0.03
ESRRB-205ENST00000509323 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
ESRRB-205ENST00000509323 NACADO15069 1562 aa14.19□□□□□ -0.14
ESRRB-205ENST00000509323 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
ESRRB-205ENST00000509323 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
ESRRB-205ENST00000509323 DCAF1Q9Y4B6 1507 aa13.96□□□□□ -0.17
ESRRB-205ENST00000509323 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
ESRRB-205ENST00000509323 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
ESRRB-205ENST00000509323 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
ESRRB-205ENST00000509323 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.2
ESRRB-205ENST00000509323 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
ESRRB-205ENST00000509323 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
ESRRB-205ENST00000509323 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
ESRRB-205ENST00000509323 EIF4G1Q04637 1599 aaKnown RBP13.46□□□□□ -0.25
ESRRB-205ENST00000509323 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
ESRRB-205ENST00000509323 CECR2Q9BXF3 1484 aa13.37□□□□□ -0.27
ESRRB-205ENST00000509323 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
ESRRB-205ENST00000509323 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
ESRRB-205ENST00000509323 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
ESRRB-205ENST00000509323 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
ESRRB-205ENST00000509323 HMGXB3Q12766 1538 aa13.04□□□□□ -0.32
ESRRB-205ENST00000509323 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
ESRRB-205ENST00000509323 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
ESRRB-205ENST00000509323 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
ESRRB-205ENST00000509323 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
ESRRB-205ENST00000509323 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
ESRRB-205ENST00000509323 CUX2O14529 1486 aa12.79□□□□□ -0.36
ESRRB-205ENST00000509323 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
ESRRB-205ENST00000509323 NESP48681 1621 aa12.79□□□□□ -0.36
ESRRB-205ENST00000509323 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
ESRRB-205ENST00000509323 WIZO95785 1651 aa12.76□□□□□ -0.37
ESRRB-205ENST00000509323 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
ESRRB-205ENST00000509323 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
ESRRB-205ENST00000509323 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
ESRRB-205ENST00000509323 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
ESRRB-205ENST00000509323 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
ESRRB-205ENST00000509323 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
ESRRB-205ENST00000509323 CFTRP13569 1480 aa12.59□□□□□ -0.39
ESRRB-205ENST00000509323 MRC2Q9UBG0 1479 aa12.57□□□□□ -0.4
ESRRB-205ENST00000509323 WDR62O43379 1518 aa12.56□□□□□ -0.4
ESRRB-205ENST00000509323 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
ESRRB-205ENST00000509323 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
ESRRB-205ENST00000509323 CCDC88BA6NC98 1476 aa12.49□□□□□ -0.41
ESRRB-205ENST00000509323 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
ESRRB-205ENST00000509323 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
ESRRB-205ENST00000509323 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
ESRRB-205ENST00000509323 ABCC8Q09428 1581 aa12.31□□□□□ -0.44
ESRRB-205ENST00000509323 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
ESRRB-205ENST00000509323 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
ESRRB-205ENST00000509323 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
ESRRB-205ENST00000509323 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
ESRRB-205ENST00000509323 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.46
ESRRB-205ENST00000509323 EIF4G3O43432 1585 aaKnown RBP12.2□□□□□ -0.46
ESRRB-205ENST00000509323 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
ESRRB-205ENST00000509323 CUX1P39880 1505 aa12.16□□□□□ -0.46
ESRRB-205ENST00000509323 SUPT5HO00267 1087 aaKnown RBP12.15□□□□□ -0.46
ESRRB-205ENST00000509323 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
ESRRB-205ENST00000509323 FGD5Q6ZNL6 1462 aa12.14□□□□□ -0.47
ESRRB-205ENST00000509323 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
ESRRB-205ENST00000509323 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
ESRRB-205ENST00000509323 RAD54L2Q9Y4B4 1467 aa12.12□□□□□ -0.47
ESRRB-205ENST00000509323 SOGA1O94964 1423 aa12.11□□□□□ -0.47
ESRRB-205ENST00000509323 TDRD9Q8NDG6 1382 aaKnown RBP12.06□□□□□ -0.48
ESRRB-205ENST00000509323 RIMBP3CA6NJZ7 1639 aa12.05□□□□□ -0.48
ESRRB-205ENST00000509323 RIMBP3BA6NNM3 1639 aa12.05□□□□□ -0.48
ESRRB-205ENST00000509323 RIMBP3Q9UFD9 1639 aa12.05□□□□□ -0.48
ESRRB-205ENST00000509323 ABCA10Q8WWZ4 1543 aa12.04□□□□□ -0.48
ESRRB-205ENST00000509323 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
ESRRB-205ENST00000509323 CHD1O14646 1710 aa12.03□□□□□ -0.48
ESRRB-205ENST00000509323 GRIN2BQ13224 1484 aa12.02□□□□□ -0.48
ESRRB-205ENST00000509323 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.48
ESRRB-205ENST00000509323 ARHGEF11O15085 1522 aa12.01□□□□□ -0.49
ESRRB-205ENST00000509323 ABCA5Q8WWZ7 1642 aa12.01□□□□□ -0.49
ESRRB-205ENST00000509323 BIVM-ERCC5R4GMW8 1640 aa12.01□□□□□ -0.49
ESRRB-205ENST00000509323 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
ESRRB-205ENST00000509323 TOP2BQ02880 1626 aa12□□□□□ -0.49
ESRRB-205ENST00000509323 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
ESRRB-205ENST00000509323 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
ESRRB-205ENST00000509323 SYNJ2O15056 1496 aa11.98□□□□□ -0.49
ESRRB-205ENST00000509323 CLASP1Q7Z460 1538 aa11.97□□□□□ -0.49
ESRRB-205ENST00000509323 PBRM1Q86U86 1689 aa11.96□□□□□ -0.5
ESRRB-205ENST00000509323 FBLN2P98095 1184 aa11.94□□□□□ -0.5
ESRRB-205ENST00000509323 CHMP7Q8WUX9 453 aaPredicted RBP11.92□□□□□ -0.5
ESRRB-205ENST00000509323 ARAP1Q96P48 1450 aa11.9□□□□□ -0.5
ESRRB-205ENST00000509323 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
ESRRB-205ENST00000509323 ERICH3Q5RHP9 1530 aa11.89□□□□□ -0.51
ESRRB-205ENST00000509323 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
ESRRB-205ENST00000509323 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
ESRRB-205ENST00000509323 NUP160Q12769 1436 aa11.86□□□□□ -0.51
ESRRB-205ENST00000509323 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
ESRRB-205ENST00000509323 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
ESRRB-205ENST00000509323 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
ESRRB-205ENST00000509323 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
ESRRB-205ENST00000509323 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
ESRRB-205ENST00000509323 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
ESRRB-205ENST00000509323 IGF1RP08069 1367 aa11.73□□□□□ -0.53
ESRRB-205ENST00000509323 CUL7Q14999 1698 aa11.73□□□□□ -0.53
ESRRB-205ENST00000509323 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms