RNA–Protein interactions for RNA: ENST00000509316.1

GABRA4-204, Transcript of gamma-aminobutyric acid type A receptor alpha4 subunit, humanhuman

TSL 3

Gene GABRA4, Length 487 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4-204ENST00000509316 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
GABRA4-204ENST00000509316 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
GABRA4-204ENST00000509316 ABCC9O60706 1549 aa25.98■■□□□ 1.75
GABRA4-204ENST00000509316 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
GABRA4-204ENST00000509316 NACADO15069 1562 aa25.01■■□□□ 1.59
GABRA4-204ENST00000509316 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
GABRA4-204ENST00000509316 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
GABRA4-204ENST00000509316 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
GABRA4-204ENST00000509316 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
GABRA4-204ENST00000509316 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
GABRA4-204ENST00000509316 UNC13AQ9UPW8 1703 aa24.23■■□□□ 1.47
GABRA4-204ENST00000509316 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
GABRA4-204ENST00000509316 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
GABRA4-204ENST00000509316 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
GABRA4-204ENST00000509316 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
GABRA4-204ENST00000509316 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
GABRA4-204ENST00000509316 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
GABRA4-204ENST00000509316 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
GABRA4-204ENST00000509316 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
GABRA4-204ENST00000509316 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
GABRA4-204ENST00000509316 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
GABRA4-204ENST00000509316 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
GABRA4-204ENST00000509316 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
GABRA4-204ENST00000509316 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
GABRA4-204ENST00000509316 PEG3Q9GZU2 1588 aa22.88■■□□□ 1.25
GABRA4-204ENST00000509316 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
GABRA4-204ENST00000509316 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
GABRA4-204ENST00000509316 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
GABRA4-204ENST00000509316 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
GABRA4-204ENST00000509316 WIZO95785 1651 aa22.52■■□□□ 1.2
GABRA4-204ENST00000509316 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
GABRA4-204ENST00000509316 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
GABRA4-204ENST00000509316 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
GABRA4-204ENST00000509316 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
GABRA4-204ENST00000509316 NESP48681 1621 aa22.37■■□□□ 1.17
GABRA4-204ENST00000509316 CUX2O14529 1486 aa22.36■■□□□ 1.17
GABRA4-204ENST00000509316 CFTRP13569 1480 aa22.2■■□□□ 1.14
GABRA4-204ENST00000509316 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
GABRA4-204ENST00000509316 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
GABRA4-204ENST00000509316 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
GABRA4-204ENST00000509316 KIF21AQ7Z4S6 1674 aa22.09■■□□□ 1.13
GABRA4-204ENST00000509316 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
GABRA4-204ENST00000509316 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
GABRA4-204ENST00000509316 WDR62O43379 1518 aa21.97■■□□□ 1.11
GABRA4-204ENST00000509316 SUPT5HO00267 1087 aaKnown RBP21.92■■□□□ 1.1
GABRA4-204ENST00000509316 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
GABRA4-204ENST00000509316 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
GABRA4-204ENST00000509316 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
GABRA4-204ENST00000509316 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
GABRA4-204ENST00000509316 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
GABRA4-204ENST00000509316 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
GABRA4-204ENST00000509316 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
GABRA4-204ENST00000509316 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
GABRA4-204ENST00000509316 SOGA1O94964 1423 aa21.48■■□□□ 1.03
GABRA4-204ENST00000509316 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
GABRA4-204ENST00000509316 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
GABRA4-204ENST00000509316 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
GABRA4-204ENST00000509316 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
GABRA4-204ENST00000509316 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
GABRA4-204ENST00000509316 CUX1P39880 1505 aa21.4■■□□□ 1.02
GABRA4-204ENST00000509316 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
GABRA4-204ENST00000509316 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
GABRA4-204ENST00000509316 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.01
GABRA4-204ENST00000509316 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
GABRA4-204ENST00000509316 TDRD9Q8NDG6 1382 aaKnown RBP21.31■■□□□ 1
GABRA4-204ENST00000509316 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
GABRA4-204ENST00000509316 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
GABRA4-204ENST00000509316 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
GABRA4-204ENST00000509316 FBLN2P98095 1184 aa21.23■□□□□ 0.99
GABRA4-204ENST00000509316 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
GABRA4-204ENST00000509316 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
GABRA4-204ENST00000509316 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
GABRA4-204ENST00000509316 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
GABRA4-204ENST00000509316 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
GABRA4-204ENST00000509316 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
GABRA4-204ENST00000509316 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
GABRA4-204ENST00000509316 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
GABRA4-204ENST00000509316 CHD1O14646 1710 aa21.06■□□□□ 0.96
GABRA4-204ENST00000509316 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
GABRA4-204ENST00000509316 ERICH3Q5RHP9 1530 aa21.03■□□□□ 0.96
GABRA4-204ENST00000509316 TRIM41Q8WV44 630 aa21■□□□□ 0.95
GABRA4-204ENST00000509316 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
GABRA4-204ENST00000509316 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
GABRA4-204ENST00000509316 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
GABRA4-204ENST00000509316 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
GABRA4-204ENST00000509316 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
GABRA4-204ENST00000509316 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
GABRA4-204ENST00000509316 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
GABRA4-204ENST00000509316 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
GABRA4-204ENST00000509316 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
GABRA4-204ENST00000509316 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
GABRA4-204ENST00000509316 NUP160Q12769 1436 aa20.84■□□□□ 0.93
GABRA4-204ENST00000509316 IGF1RP08069 1367 aa20.83■□□□□ 0.92
GABRA4-204ENST00000509316 CUL7Q14999 1698 aa20.79■□□□□ 0.92
GABRA4-204ENST00000509316 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
GABRA4-204ENST00000509316 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
GABRA4-204ENST00000509316 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
GABRA4-204ENST00000509316 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
GABRA4-204ENST00000509316 KIAA0586Q9BVV6 1533 aa20.67■□□□□ 0.9
GABRA4-204ENST00000509316 SHROOM2Q13796 1616 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms