RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 NISCHQ9Y2I1 1504 aa38.61■■■■□ 3.77
SMAD5-205ENST00000509297 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
SMAD5-205ENST00000509297 ABCC9O60706 1549 aa34.44■■■■□ 3.1
SMAD5-205ENST00000509297 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
SMAD5-205ENST00000509297 NACADO15069 1562 aa32.73■■■□□ 2.83
SMAD5-205ENST00000509297 DCAF8L2P0C7V8 631 aa32.4■■■□□ 2.78
SMAD5-205ENST00000509297 MYO15BQ96JP2 1530 aa32.39■■■□□ 2.78
SMAD5-205ENST00000509297 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
SMAD5-205ENST00000509297 UNC13AQ9UPW8 1703 aa32.06■■■□□ 2.72
SMAD5-205ENST00000509297 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
SMAD5-205ENST00000509297 ZCCHC6Q5VYS8 1495 aaKnown RBP32.02■■■□□ 2.72
SMAD5-205ENST00000509297 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
SMAD5-205ENST00000509297 BICRAQ9NZM4 1560 aa31.92■■■□□ 2.7
SMAD5-205ENST00000509297 SHROOM4Q9ULL8 1493 aa31.64■■■□□ 2.66
SMAD5-205ENST00000509297 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
SMAD5-205ENST00000509297 CC2D2AQ9P2K1 1620 aa31.14■■■□□ 2.58
SMAD5-205ENST00000509297 EIF4G1Q04637 1599 aaKnown RBP31.13■■■□□ 2.57
SMAD5-205ENST00000509297 CECR2Q9BXF3 1484 aa31.06■■■□□ 2.56
SMAD5-205ENST00000509297 NCAPD3P42695 1498 aa30.23■■■□□ 2.43
SMAD5-205ENST00000509297 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
SMAD5-205ENST00000509297 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
SMAD5-205ENST00000509297 SMARCA2P51531 1590 aa30.04■■■□□ 2.4
SMAD5-205ENST00000509297 HMGXB3Q12766 1538 aa30■■■□□ 2.39
SMAD5-205ENST00000509297 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
SMAD5-205ENST00000509297 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
SMAD5-205ENST00000509297 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
SMAD5-205ENST00000509297 CUX2O14529 1486 aa29.74■■■□□ 2.35
SMAD5-205ENST00000509297 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
SMAD5-205ENST00000509297 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
SMAD5-205ENST00000509297 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
SMAD5-205ENST00000509297 NESP48681 1621 aa29.6■■■□□ 2.33
SMAD5-205ENST00000509297 LAMC3Q9Y6N6 1575 aa29.51■■■□□ 2.31
SMAD5-205ENST00000509297 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
SMAD5-205ENST00000509297 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
SMAD5-205ENST00000509297 WIZO95785 1651 aa29.31■■■□□ 2.28
SMAD5-205ENST00000509297 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
SMAD5-205ENST00000509297 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
SMAD5-205ENST00000509297 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
SMAD5-205ENST00000509297 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
SMAD5-205ENST00000509297 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
SMAD5-205ENST00000509297 WDR62O43379 1518 aa28.99■■■□□ 2.23
SMAD5-205ENST00000509297 CFTRP13569 1480 aa28.98■■■□□ 2.23
SMAD5-205ENST00000509297 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
SMAD5-205ENST00000509297 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
SMAD5-205ENST00000509297 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
SMAD5-205ENST00000509297 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
SMAD5-205ENST00000509297 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
SMAD5-205ENST00000509297 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
SMAD5-205ENST00000509297 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
SMAD5-205ENST00000509297 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
SMAD5-205ENST00000509297 OSCARQ8IYS5 282 aa28.37■■■□□ 2.13
SMAD5-205ENST00000509297 DNMBPQ6XZF7 1577 aa28.29■■■□□ 2.12
SMAD5-205ENST00000509297 ZNF608Q9ULD9 1512 aaPredicted RBP28.28■■■□□ 2.12
SMAD5-205ENST00000509297 TRIM41Q8WV44 630 aa28.22■■■□□ 2.11
SMAD5-205ENST00000509297 EIF4G3O43432 1585 aaKnown RBP28.13■■■□□ 2.09
SMAD5-205ENST00000509297 TARBP1Q13395 1621 aaKnown RBP28.13■■■□□ 2.09
SMAD5-205ENST00000509297 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
SMAD5-205ENST00000509297 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
SMAD5-205ENST00000509297 SOGA1O94964 1423 aa27.97■■■□□ 2.07
SMAD5-205ENST00000509297 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.06
SMAD5-205ENST00000509297 RIMBP3CA6NJZ7 1639 aa27.94■■■□□ 2.06
SMAD5-205ENST00000509297 RIMBP3BA6NNM3 1639 aa27.94■■■□□ 2.06
SMAD5-205ENST00000509297 RIMBP3Q9UFD9 1639 aa27.94■■■□□ 2.06
SMAD5-205ENST00000509297 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
SMAD5-205ENST00000509297 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
SMAD5-205ENST00000509297 CUX1P39880 1505 aa27.91■■■□□ 2.06
SMAD5-205ENST00000509297 ARHGEF11O15085 1522 aa27.89■■■□□ 2.06
SMAD5-205ENST00000509297 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
SMAD5-205ENST00000509297 CHD1O14646 1710 aa27.86■■■□□ 2.05
SMAD5-205ENST00000509297 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
SMAD5-205ENST00000509297 FBLN2P98095 1184 aa27.78■■■□□ 2.04
SMAD5-205ENST00000509297 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
SMAD5-205ENST00000509297 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
SMAD5-205ENST00000509297 GRIN2BQ13224 1484 aa27.74■■■□□ 2.03
SMAD5-205ENST00000509297 CHMP7Q8WUX9 453 aaPredicted RBP27.66■■■□□ 2.02
SMAD5-205ENST00000509297 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
SMAD5-205ENST00000509297 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
SMAD5-205ENST00000509297 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
SMAD5-205ENST00000509297 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.01
SMAD5-205ENST00000509297 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
SMAD5-205ENST00000509297 ARAP1Q96P48 1450 aa27.62■■■□□ 2.01
SMAD5-205ENST00000509297 SYNJ1O43426 1573 aa27.61■■■□□ 2.01
SMAD5-205ENST00000509297 ABCA5Q8WWZ7 1642 aa27.58■■■□□ 2.01
SMAD5-205ENST00000509297 WRNQ14191 1432 aaPredicted RBP eCLIP27.56■■■□□ 2
SMAD5-205ENST00000509297 PBRM1Q86U86 1689 aa27.56■■■□□ 2
SMAD5-205ENST00000509297 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
SMAD5-205ENST00000509297 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
SMAD5-205ENST00000509297 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
SMAD5-205ENST00000509297 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
SMAD5-205ENST00000509297 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
SMAD5-205ENST00000509297 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
SMAD5-205ENST00000509297 NUP160Q12769 1436 aa27.31■■□□□ 1.96
SMAD5-205ENST00000509297 TRHP20396 242 aaPredicted RBP27.28■■□□□ 1.96
SMAD5-205ENST00000509297 CEP170Q5SW79 1584 aa27.23■■□□□ 1.95
SMAD5-205ENST00000509297 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
SMAD5-205ENST00000509297 ERCC6L2Q5T890 1561 aa27.13■■□□□ 1.93
SMAD5-205ENST00000509297 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
SMAD5-205ENST00000509297 JPH4Q96JJ6 628 aa26.99■■□□□ 1.91
SMAD5-205ENST00000509297 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
SMAD5-205ENST00000509297 IGF1RP08069 1367 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms